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The map label for this gene is ssb [H]

Identifier: 213159026

GI number: 213159026

Start: 3845328

End: 3845909

Strand: Reverse

Name: ssb [H]

Synonym: AB57_3734

Alternate gene names: 213159026

Gene position: 3845909-3845328 (Counterclockwise)

Preceding gene: 213159027

Following gene: 213159023

Centisome position: 94.95

GC content: 44.5

Gene sequence:

>582_bases
ATGCGTGGTGTAAATAAGGTTATTTTGGTTGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCAAATGGGGGCTC
GTTGACCCAGTTTTCTATCGCAACAAGTGAAGTTTGGACCGATAAAAATACAGGTGAACGTAAAGAACAAACAGAATGGC
ACCGTATTGTTTTGCATAACCGTTTAGGGGAAATTGCTCAGCAGTTTTTACGTAAAGGTTCTAAGGTTTATATCGAAGGT
TCATTACGTACACGTCAGTGGACAGACCAAAATGGTCAAGAACGTTACACTACAGAAATCCGTGGCGACCAGATGCAAAT
GTTAGATGCTCGCCAACAAGGTGAACAAGGTTTTGCTGGCGGTAATGATTTTAACCAACCACGTTTTAACGCGCCTCAAC
AAGGTGGCGGCTATCAAAATAACAACCAAGGTGGTGGCTACGGCCAAAACAATGGTGGTTATGGTGGCCAAGGTGGTTTC
GGTAATGGTGGCAATAGCCCACAAGGTGGTGGTTTCGCTCCTAAAGCGCCACAACAACCAGCATCTGCACCAGCTGATTT
AGACGACGATTTACCGTTCTAA

Upstream 100 bases:

>100_bases
TTCGCGACGTGATTTAACGCAGTTGTTCGGTAAAGAGGTAGCCATTTAAGCATAACTCTTATAAAGTAAAACATAGAAAT
GTATAGGATGAAGACAGCTA

Downstream 100 bases:

>100_bases
TCAAAGTTTTAAAAAAGGCGAGTTTATCTCGCCTTTTTTATTACTCAATTCCAAGTAAACGTACCAGTGCTGTGCCAGCC
GCTGCCAGACAAATCACCAA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF

Sequences:

>Translated_193_residues
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF
>Mature_193_residues
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAGGNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGF
GNGGNSPQGGGFAPKAPQQPASAPADLDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=33.6283185840708, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1790494, Length=116, Percent_Identity=64.6551724137931, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20979; Mature: 20979

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHN
CCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHH
RLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHCCCCCCC
GNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGFGNGGNSPQGGGFAPKAPQQP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASAPADLDDDLPF
CCCCCCCCCCCCC
>Mature Secondary Structure
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHN
CCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHH
RLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHCCCCCCC
GNDFNQPRFNAPQQGGGYQNNNQGGGYGQNNGGYGGQGGFGNGGNSPQGGGFAPKAPQQP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASAPADLDDDLPF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]