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The map label for this gene is tex [H]

Identifier: 213158974

GI number: 213158974

Start: 3793637

End: 3795985

Strand: Reverse

Name: tex [H]

Synonym: AB57_3676

Alternate gene names: 213158974

Gene position: 3795985-3793637 (Counterclockwise)

Preceding gene: 213158979

Following gene: 213158973

Centisome position: 93.72

GC content: 43.12

Gene sequence:

>2349_bases
ATGACTGACTTAGTTCAGCAGTTGGCAAGTGAGCTTGCCGTACGTCCAAACCAAGTAGAAGCTGCCATCCGCTTAATTGA
TGAAGGTGCCAGTGTTCCATTCATTGCCCGTTACCGTAAAGAAGTAACACAAGGTTTAGATGATACGCAGTTACGCCAAT
TAGATACTCGTTTAGCGTATTTACGTGATTTATATGAGCGCCGTGAAAAGGTCATTCAGTCATTGCAAGAACAGAATAAA
TTGAATGATGACTTGTTGGCGCGGGTGAATGCAGCCGAAACAAAAAATGCTTTAGAAGAAATTTATGCGCCGTACCGTCC
TAAACGTACGAGCAAATCTTTCAAGGCGAAAGAAGCGGGCCTTGGACCAATTGCCGAAAAAATTATTTCAGAACAAATTG
ATCCGACAGAAGCATTGGCTGGTTTTAGTCATGAAGACTATCCGGACGTTGAAAGTCAATTAGACGCAATCCAGCATATT
CTGATTGATGACTGGGCACAAAACATTCCTCTTACTACAGAATTAAAAGCGACTTTCGCAAAAACAGCAGTGTTAAAAAG
TACTGTTGCATCTGAAGAGAAGAAAGAAGTGGGCAAAAAGTTCCGTGATTACTTTGAATTCTCTGAAGGCGTAAACAAAT
TACCATCACATCGTTTATTGGCGATGTTACGTGGCCGCCAAGAAAACGTACTTGGTTTAAAAGTTGATGGCGAAGATGAT
GCACCATTGGCTCGTATTGAAACTGAATACAACCTTGATCAGGTTCAGCCACAAACACGTCAAGATTTCTTAAAACAAAC
TGCAAAATTATTCTGGTTAGGTAAAGTCCGTCCTCAAATCGAGCACTCATTACTTACAGAAAAACGTCTTGCTGCTGAAG
CAGAAGCAATGCAGGTGTTTGCTGAAAATCTTCGTCACTTATTGTTATCAGCGCCAGCTGGTAGCCGTACGACTTTGGGT
GTCGACCCTGGTATTCGTACTGGTGTGAAACTAGCTGTGGTAAGCGAAGCTGGTGATGTACTTGCACATAGCACGATTTA
TCCATTTGCGCCTAAAGAAGATAAAGAAGGCTCAATTGCTGAGCTTGCACGTCTATGTCGTGAATACAATGTCGAGCTTA
TTGCTATTGGCAATGGTACTGCGAGCCGTGAAACAGAAGCTGTTGTAGCTGAAATGATGGCTGCAAATACAGATCTTAAA
TTAACTCGCGTAACCGTAAGTGAAGCAGGCGCCTCTGTTTACTCTGCAAGTGAACTTGCTGCGGCGGAACTGCCAGAGCT
TGATGTTTCAATCCGTGGTGCAGTTTCTATTGCGCGCCGTTTACAAGACCCGCTTGCTGAGCTTGTTAAAATTGATCCGA
AGTCGATTGGCGTAGGTCAATATCAACACGATGTGAACCAAACTGGTTTAGCAAAAACGCTTGATGCAGTTGTAGAAGAC
TGTGTGAACGCTGTTGGGGTAGATGTAAATACTGCTTCACCAGCAATCTTGGCTTATATTGCAGGTTTAAACAAAGCAAT
TGCACAGCAAATTGTTGAATACCGTAAAGAGCATGGCCGTTTTGACACACGTCAGGCACTTAAAAATGTACCGCGTCTTG
GCGAACGTACTTTTGAACAGGCAGCTGGTTTCTTGCGTATCCAAAATGGTTCAGAGCCATTAGATGCATCTGCTGTTCAC
CCTGAAAGTTATGGTCTTGTTGAGAAAATTGTTGCAGCAAAAGCGACAACGGTAAAAGACATTATTGGTAATACCGAAAT
TATTCGTCAGGTAAAAGCAGAAGAGTTTGTTGATGACAAATTCGGTTTGCCAACCATTCAAGACGTTTTAGCAGAACTTG
AAAAACCGGGCCGTGACCCTCGTCCAGAATTCCGCACAGCTAAATTCCGTGAAGACATTACTGAAGTTGCTCAGTTGACT
GAAGGTATGCAGCTTGAAGGTGTTGTGACGAACGTGACGAATTTTGGTGCTTTTGTTGATATTGGTGTGCATCAAGATGG
TTTGGTTCATATCTCTGAATTAGCCAATGAGTTCGTTTCTGACCCGCATAAAGTGGTAAAACCAGGTCAGATCGTACAAG
TGCGTGTTATGCAGGTTGATGTTGAACGTAACCGTGTGAACTTGAGTATGCGTGCAGAAGGTGCGGCACCTGTGAAAGCA
CAGCGACCACCACGTCGTGAACAAAATAACGAACAGCGTTCTGAGCGTAAACCACAAGGTAAACGTCCACAACCGCGTAA
AGATCAAGTTGAACGTCCGCAGCGTAGTAAGCAAGAAAAACCACAAGAGCAAAAAATTGGTGGTTTTGGTGCATTATTAT
TGCAAGCAGGAATTAAGGGTTCTAAATAA

Upstream 100 bases:

>100_bases
ATACAAAAAAACGTTTTGAATACGCAAACAAGTGTGGATTTTATGGTCTTGGTCTTTATAATCAGTGCTTTTAAACTTTA
TCCTTGTGGGATCAAACACG

Downstream 100 bases:

>100_bases
GAGCCTTTAGAGAACTTAAAAAAGCCTCCTAAACGGGAGGCTTTTTTATTGTTTCTAAATCGTCTTCTAAATGGCTAGCG
CTATGTTTTATTAAAACATC

Product: RNA binding S1 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 782; Mature: 781

Protein sequence:

>782_residues
MTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLAYLRDLYERREKVIQSLQEQNK
LNDDLLARVNAAETKNALEEIYAPYRPKRTSKSFKAKEAGLGPIAEKIISEQIDPTEALAGFSHEDYPDVESQLDAIQHI
LIDDWAQNIPLTTELKATFAKTAVLKSTVASEEKKEVGKKFRDYFEFSEGVNKLPSHRLLAMLRGRQENVLGLKVDGEDD
APLARIETEYNLDQVQPQTRQDFLKQTAKLFWLGKVRPQIEHSLLTEKRLAAEAEAMQVFAENLRHLLLSAPAGSRTTLG
VDPGIRTGVKLAVVSEAGDVLAHSTIYPFAPKEDKEGSIAELARLCREYNVELIAIGNGTASRETEAVVAEMMAANTDLK
LTRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVED
CVNAVGVDVNTASPAILAYIAGLNKAIAQQIVEYRKEHGRFDTRQALKNVPRLGERTFEQAAGFLRIQNGSEPLDASAVH
PESYGLVEKIVAAKATTVKDIIGNTEIIRQVKAEEFVDDKFGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEVAQLT
EGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVMQVDVERNRVNLSMRAEGAAPVKA
QRPPRREQNNEQRSERKPQGKRPQPRKDQVERPQRSKQEKPQEQKIGGFGALLLQAGIKGSK

Sequences:

>Translated_782_residues
MTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLAYLRDLYERREKVIQSLQEQNK
LNDDLLARVNAAETKNALEEIYAPYRPKRTSKSFKAKEAGLGPIAEKIISEQIDPTEALAGFSHEDYPDVESQLDAIQHI
LIDDWAQNIPLTTELKATFAKTAVLKSTVASEEKKEVGKKFRDYFEFSEGVNKLPSHRLLAMLRGRQENVLGLKVDGEDD
APLARIETEYNLDQVQPQTRQDFLKQTAKLFWLGKVRPQIEHSLLTEKRLAAEAEAMQVFAENLRHLLLSAPAGSRTTLG
VDPGIRTGVKLAVVSEAGDVLAHSTIYPFAPKEDKEGSIAELARLCREYNVELIAIGNGTASRETEAVVAEMMAANTDLK
LTRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVED
CVNAVGVDVNTASPAILAYIAGLNKAIAQQIVEYRKEHGRFDTRQALKNVPRLGERTFEQAAGFLRIQNGSEPLDASAVH
PESYGLVEKIVAAKATTVKDIIGNTEIIRQVKAEEFVDDKFGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEVAQLT
EGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVMQVDVERNRVNLSMRAEGAAPVKA
QRPPRREQNNEQRSERKPQGKRPQPRKDQVERPQRSKQEKPQEQKIGGFGALLLQAGIKGSK
>Mature_781_residues
TDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLAYLRDLYERREKVIQSLQEQNKL
NDDLLARVNAAETKNALEEIYAPYRPKRTSKSFKAKEAGLGPIAEKIISEQIDPTEALAGFSHEDYPDVESQLDAIQHIL
IDDWAQNIPLTTELKATFAKTAVLKSTVASEEKKEVGKKFRDYFEFSEGVNKLPSHRLLAMLRGRQENVLGLKVDGEDDA
PLARIETEYNLDQVQPQTRQDFLKQTAKLFWLGKVRPQIEHSLLTEKRLAAEAEAMQVFAENLRHLLLSAPAGSRTTLGV
DPGIRTGVKLAVVSEAGDVLAHSTIYPFAPKEDKEGSIAELARLCREYNVELIAIGNGTASRETEAVVAEMMAANTDLKL
TRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVEDC
VNAVGVDVNTASPAILAYIAGLNKAIAQQIVEYRKEHGRFDTRQALKNVPRLGERTFEQAAGFLRIQNGSEPLDASAVHP
ESYGLVEKIVAAKATTVKDIIGNTEIIRQVKAEEFVDDKFGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEVAQLTE
GMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVMQVDVERNRVNLSMRAEGAAPVKAQ
RPPRREQNNEQRSERKPQGKRPQPRKDQVERPQRSKQEKPQEQKIGGFGALLLQAGIKGSK

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=792, Percent_Identity=32.8282828282828, Blast_Score=374, Evalue=1e-103,
Organism=Homo sapiens, GI27597090, Length=394, Percent_Identity=25.3807106598985, Blast_Score=96, Evalue=9e-20,
Organism=Escherichia coli, GI87082262, Length=749, Percent_Identity=52.3364485981308, Blast_Score=744, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=89, Percent_Identity=41.5730337078652, Blast_Score=73, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17511129, Length=706, Percent_Identity=27.4787535410765, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17552892, Length=310, Percent_Identity=26.7741935483871, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI62484314, Length=782, Percent_Identity=31.9693094629156, Blast_Score=372, Evalue=1e-103,
Organism=Drosophila melanogaster, GI24640080, Length=536, Percent_Identity=21.8283582089552, Blast_Score=78, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 86549; Mature: 86418

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLAY
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LRDLYERREKVIQSLQEQNKLNDDLLARVNAAETKNALEEIYAPYRPKRTSKSFKAKEAG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
LGPIAEKIISEQIDPTEALAGFSHEDYPDVESQLDAIQHILIDDWAQNIPLTTELKATFA
CCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KTAVLKSTVASEEKKEVGKKFRDYFEFSEGVNKLPSHRLLAMLRGRQENVLGLKVDGEDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCC
APLARIETEYNLDQVQPQTRQDFLKQTAKLFWLGKVRPQIEHSLLTEKRLAAEAEAMQVF
CCHHHEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AENLRHLLLSAPAGSRTTLGVDPGIRTGVKLAVVSEAGDVLAHSTIYPFAPKEDKEGSIA
HHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHH
ELARLCREYNVELIAIGNGTASRETEAVVAEMMAANTDLKLTRVTVSEAGASVYSASELA
HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHHH
AAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVED
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
CVNAVGVDVNTASPAILAYIAGLNKAIAQQIVEYRKEHGRFDTRQALKNVPRLGERTFEQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHH
AAGFLRIQNGSEPLDASAVHPESYGLVEKIVAAKATTVKDIIGNTEIIRQVKAEEFVDDK
HCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
FGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEVAQLTEGMQLEGVVTNVTNFGAFVD
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHCCCEEE
IGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVMQVDVERNRVNLSMRAEGAAPVKA
ECCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCC
QRPPRREQNNEQRSERKPQGKRPQPRKDQVERPQRSKQEKPQEQKIGGFGALLLQAGIKG
CCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCCHHHHCCHHHHHHHHHCCCC
SK
CC
>Mature Secondary Structure 
TDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLAY
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LRDLYERREKVIQSLQEQNKLNDDLLARVNAAETKNALEEIYAPYRPKRTSKSFKAKEAG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
LGPIAEKIISEQIDPTEALAGFSHEDYPDVESQLDAIQHILIDDWAQNIPLTTELKATFA
CCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KTAVLKSTVASEEKKEVGKKFRDYFEFSEGVNKLPSHRLLAMLRGRQENVLGLKVDGEDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCC
APLARIETEYNLDQVQPQTRQDFLKQTAKLFWLGKVRPQIEHSLLTEKRLAAEAEAMQVF
CCHHHEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AENLRHLLLSAPAGSRTTLGVDPGIRTGVKLAVVSEAGDVLAHSTIYPFAPKEDKEGSIA
HHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHH
ELARLCREYNVELIAIGNGTASRETEAVVAEMMAANTDLKLTRVTVSEAGASVYSASELA
HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHHH
AAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVED
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
CVNAVGVDVNTASPAILAYIAGLNKAIAQQIVEYRKEHGRFDTRQALKNVPRLGERTFEQ
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHH
AAGFLRIQNGSEPLDASAVHPESYGLVEKIVAAKATTVKDIIGNTEIIRQVKAEEFVDDK
HCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
FGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEVAQLTEGMQLEGVVTNVTNFGAFVD
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHCCCEEE
IGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVMQVDVERNRVNLSMRAEGAAPVKA
ECCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCC
QRPPRREQNNEQRSERKPQGKRPQPRKDQVERPQRSKQEKPQEQKIGGFGALLLQAGIKG
CCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCCHHHHCCHHHHHHHHHCCCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]