| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is yvdB [H]
Identifier: 213158973
GI number: 213158973
Start: 3791146
End: 3793266
Strand: Reverse
Name: yvdB [H]
Synonym: AB57_3675
Alternate gene names: 213158973
Gene position: 3793266-3791146 (Counterclockwise)
Preceding gene: 213158974
Following gene: 213158970
Centisome position: 93.65
GC content: 39.56
Gene sequence:
>2121_bases GTGGCTTTACCCTTATGTTTGGGTATTGCCTTAGCCTCAGGTGCTCCAATTATTTCTGGCATTATTGCTGGAATAGTGGG TGGAATTATTGTTGGCCTGCTGAGTGGCTCTCATATCAGCGTTTCTGGCCCAGCAGCAGGGTTGACTGCGGTCATCCTTG TACAACTCGATCAATTAGGCGGCAATTATGCCGCCTTTTTATTGTGTATTGTATTTGCAGGAATTTTACAAATTCTGTTT GGTGTATTTAAGTTGGGTTTCTTTGCTAACTTTATTCCAAACAATGTCATTTTAGGATTATTGGCAGCCATTGGTGCCAT TCTGATTGTGACACAGTTACCTTATTTATTTGGGTTGACTGATTTTTCATGGAAAGAAGTTTGGACTGCTACACCGGATA CGTTTATCCAAAAATTTGATGCTGGAGCAGCATTGATTGGACTATTGAGCTTATTTTTAATTTTAGCTTGGGACAGTAGC CCACTTAAAAAGTTAGCGTTGCCTTCTGCCTTAATTGCCGTGGTACTCGCAGCAGTTTTTAACTTTGTTTTAATAAGTAT CGGTTCTTCATGGGCTGTGCAAAGTAATAATTTGATTCAACTACCAAATATATTGCAAGCACCAGAAGAGGTATTGGTTT TTCCTGACTTTAGCTATTTAGCTGAACCATTAATTTATACCGGAGCCATTACACTTGCGATCGTGGCATCTTTAGAAACA TTACTAAATTTAGAAGCGGCCGATAAGCTTGATCCTCAAAAGCGTTCATCTCCACCTAATCGTGAGTTATGGGCGCAAGG TGCAGGTAATATTGTGTCGGGTTTAATTGGCGGAATGCCAGTGACCTCAGTGATTGTCCGTAGTTCTGTAAATGCCAATA CAGGTGCACGTAGTAAATGCTCAACCATTATTCACGGTGTGTTGTTACTGCTTGCCATTCTATTTTTTGTCCCACTCATG AACATGATTCCTTTGTCTGCACTTGCAGCAATTTTGATCGTGACTGGTTTTAAACTGACTCATCCAAAGTTATTCAAGCA GCTTTACCAAAAAGGTTGGAGACAGTTTTTACCATTCATTATTACCTTGGTTGCAATCTTGCTGACAGATTTATTAACCG GAATCTTGGTGGGCCTATTTACCAGTAGCGCATTTATTTTATATGGCAACTTCAATAAAGGTGTTCGTGTTTATAAAGAA AAGCATTTACATGGAATCGTGACGCGTATTGAGCTTCCTTCACAAGTGACTTTTCTGAATCGTTCCGCACTCATTTCTGC CTTGGAACATATTCATAAAGATCAACAGTTGATTATTGATGCCACTCAATGTGATTCGATTGATCCGGATATTTATCAAG TCATTCAAGACTATCAAAATGAGACGGCAGTTAAACGCCAAGTCGACCTTAAGCTTATTGGATTTAAACAGCACTATGAA GAGGTAGATGATGCAGTACTGGATATCTACATTAGTACGAGAGATTTACAACGTAAATTAAGTCCACAGCAAGTCATTAC TTTACTTAAAGAAGGAAATGAACGTTTCGTAAAAAATGAGCGTTTGCAACGTGATATTTATCGTCAAATTCGTGTTACCG CAGATGAAGGCCAGCATCCAATTGCTGCCGTTTTGGGATGTATGGACTCACGTGCTCCAACTGAAATGATTTTTGACGTG GGTATTGGTGATCTATTTAGTTTAAGGATTGCAGGTAATATTGCAGGTCAAAAGGTATTAGGCTCGCTTGAGTTTGCTTG TCAGGCCAAAGGCTCAAAAGTCATTTTAGTTTTAGGCCATACTGACTGTGGTGCAGTGACTAGTGCATGTCAGTTACGCT TACAGCAAAAGCAAATCTCTGATGTCAAAGAGATGCCGCATATTCAATATGTGCTTGGTCCGCTCATGCATTCGGTAGAA AGCGTATATGACATTATGCAACCCCGTGAATTAAACAAGACCTTCGTAAATCAGGTAACTGCTATGAATGTTCACTACAA TATCCAATATATTATTAATAACAGTACGGTACTTAAAGACTTACTGGATCGTGGTGAAATAGCGATTGTTGGCGCGATTT ACGATGTTAAAACAGGGCATGTCGAGTTTTTAGATGCGTAA
Upstream 100 bases:
>100_bases ATTGTTTTTTATATTATAAATGGTTGTTTTTATGCCGGCTTTAGAACTGAAAAATAGATTTCACGTAAACGACCTCCTTT CGGGAGTGGTCGTATTTCTC
Downstream 100 bases:
>100_bases ATAGAATCAAATAAAAAAGCGCCTTTCATGAGGCGCTTTTTTATTTAAGCTTGCTGAATATTTTAAATTACCAATGCTCA CCTGGGAAAATGCGTGCATA
Product: sulfate transporter
Products: CO2; H2O
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MALPLCLGIALASGAPIISGIIAGIVGGIIVGLLSGSHISVSGPAAGLTAVILVQLDQLGGNYAAFLLCIVFAGILQILF GVFKLGFFANFIPNNVILGLLAAIGAILIVTQLPYLFGLTDFSWKEVWTATPDTFIQKFDAGAALIGLLSLFLILAWDSS PLKKLALPSALIAVVLAAVFNFVLISIGSSWAVQSNNLIQLPNILQAPEEVLVFPDFSYLAEPLIYTGAITLAIVASLET LLNLEAADKLDPQKRSSPPNRELWAQGAGNIVSGLIGGMPVTSVIVRSSVNANTGARSKCSTIIHGVLLLLAILFFVPLM NMIPLSALAAILIVTGFKLTHPKLFKQLYQKGWRQFLPFIITLVAILLTDLLTGILVGLFTSSAFILYGNFNKGVRVYKE KHLHGIVTRIELPSQVTFLNRSALISALEHIHKDQQLIIDATQCDSIDPDIYQVIQDYQNETAVKRQVDLKLIGFKQHYE EVDDAVLDIYISTRDLQRKLSPQQVITLLKEGNERFVKNERLQRDIYRQIRVTADEGQHPIAAVLGCMDSRAPTEMIFDV GIGDLFSLRIAGNIAGQKVLGSLEFACQAKGSKVILVLGHTDCGAVTSACQLRLQQKQISDVKEMPHIQYVLGPLMHSVE SVYDIMQPRELNKTFVNQVTAMNVHYNIQYIINNSTVLKDLLDRGEIAIVGAIYDVKTGHVEFLDA
Sequences:
>Translated_706_residues MALPLCLGIALASGAPIISGIIAGIVGGIIVGLLSGSHISVSGPAAGLTAVILVQLDQLGGNYAAFLLCIVFAGILQILF GVFKLGFFANFIPNNVILGLLAAIGAILIVTQLPYLFGLTDFSWKEVWTATPDTFIQKFDAGAALIGLLSLFLILAWDSS PLKKLALPSALIAVVLAAVFNFVLISIGSSWAVQSNNLIQLPNILQAPEEVLVFPDFSYLAEPLIYTGAITLAIVASLET LLNLEAADKLDPQKRSSPPNRELWAQGAGNIVSGLIGGMPVTSVIVRSSVNANTGARSKCSTIIHGVLLLLAILFFVPLM NMIPLSALAAILIVTGFKLTHPKLFKQLYQKGWRQFLPFIITLVAILLTDLLTGILVGLFTSSAFILYGNFNKGVRVYKE KHLHGIVTRIELPSQVTFLNRSALISALEHIHKDQQLIIDATQCDSIDPDIYQVIQDYQNETAVKRQVDLKLIGFKQHYE EVDDAVLDIYISTRDLQRKLSPQQVITLLKEGNERFVKNERLQRDIYRQIRVTADEGQHPIAAVLGCMDSRAPTEMIFDV GIGDLFSLRIAGNIAGQKVLGSLEFACQAKGSKVILVLGHTDCGAVTSACQLRLQQKQISDVKEMPHIQYVLGPLMHSVE SVYDIMQPRELNKTFVNQVTAMNVHYNIQYIINNSTVLKDLLDRGEIAIVGAIYDVKTGHVEFLDA >Mature_705_residues ALPLCLGIALASGAPIISGIIAGIVGGIIVGLLSGSHISVSGPAAGLTAVILVQLDQLGGNYAAFLLCIVFAGILQILFG VFKLGFFANFIPNNVILGLLAAIGAILIVTQLPYLFGLTDFSWKEVWTATPDTFIQKFDAGAALIGLLSLFLILAWDSSP LKKLALPSALIAVVLAAVFNFVLISIGSSWAVQSNNLIQLPNILQAPEEVLVFPDFSYLAEPLIYTGAITLAIVASLETL LNLEAADKLDPQKRSSPPNRELWAQGAGNIVSGLIGGMPVTSVIVRSSVNANTGARSKCSTIIHGVLLLLAILFFVPLMN MIPLSALAAILIVTGFKLTHPKLFKQLYQKGWRQFLPFIITLVAILLTDLLTGILVGLFTSSAFILYGNFNKGVRVYKEK HLHGIVTRIELPSQVTFLNRSALISALEHIHKDQQLIIDATQCDSIDPDIYQVIQDYQNETAVKRQVDLKLIGFKQHYEE VDDAVLDIYISTRDLQRKLSPQQVITLLKEGNERFVKNERLQRDIYRQIRVTADEGQHPIAAVLGCMDSRAPTEMIFDVG IGDLFSLRIAGNIAGQKVLGSLEFACQAKGSKVILVLGHTDCGAVTSACQLRLQQKQISDVKEMPHIQYVLGPLMHSVES VYDIMQPRELNKTFVNQVTAMNVHYNIQYIINNSTVLKDLLDRGEIAIVGAIYDVKTGHVEFLDA
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI262206105, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI262206075, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI262206069, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI262206063, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI87081859, Length=406, Percent_Identity=27.8325123152709, Blast_Score=103, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17551690, Length=333, Percent_Identity=23.7237237237237, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24649801, Length=418, Percent_Identity=26.0765550239234, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI19922482, Length=442, Percent_Identity=24.8868778280543, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI21358633, Length=510, Percent_Identity=22.7450980392157, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24647160, Length=489, Percent_Identity=21.6768916155419, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355087, Length=489, Percent_Identity=21.2678936605317, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24651449, Length=426, Percent_Identity=22.5352112676056, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI85815873, Length=496, Percent_Identity=21.7741935483871, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24663084, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=6e-11, Organism=Drosophila melanogaster, GI21357695, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: 4.2.1.1
Molecular weight: Translated: 76867; Mature: 76736
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPLCLGIALASGAPIISGIIAGIVGGIIVGLLSGSHISVSGPAAGLTAVILVQLDQLG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCC GNYAAFLLCIVFAGILQILFGVFKLGFFANFIPNNVILGLLAAIGAILIVTQLPYLFGLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DFSWKEVWTATPDTFIQKFDAGAALIGLLSLFLILAWDSSPLKKLALPSALIAVVLAAVF CCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NFVLISIGSSWAVQSNNLIQLPNILQAPEEVLVFPDFSYLAEPLIYTGAITLAIVASLET HHHHHHCCCCCEECCCCEEECCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LLNLEAADKLDPQKRSSPPNRELWAQGAGNIVSGLIGGMPVTSVIVRSSVNANTGARSKC HHCCHHHHCCCCHHCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHH STIIHGVLLLLAILFFVPLMNMIPLSALAAILIVTGFKLTHPKLFKQLYQKGWRQFLPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ITLVAILLTDLLTGILVGLFTSSAFILYGNFNKGVRVYKEKHLHGIVTRIELPSQVTFLN HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHEECCCHHHHHH RSALISALEHIHKDQQLIIDATQCDSIDPDIYQVIQDYQNETAVKRQVDLKLIGFKQHYE HHHHHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHH EVDDAVLDIYISTRDLQRKLSPQQVITLLKEGNERFVKNERLQRDIYRQIRVTADEGQHP HHHHHHHEEEECHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCH IAAVLGCMDSRAPTEMIFDVGIGDLFSLRIAGNIAGQKVLGSLEFACQAKGSKVILVLGH HHHHHHHHCCCCCHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEC TDCGAVTSACQLRLQQKQISDVKEMPHIQYVLGPLMHSVESVYDIMQPRELNKTFVNQVT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AMNVHYNIQYIINNSTVLKDLLDRGEIAIVGAIYDVKTGHVEFLDA EEEEEEEEEEEECCCHHHHHHHCCCCEEEEEEEEECCCCCEEEECC >Mature Secondary Structure ALPLCLGIALASGAPIISGIIAGIVGGIIVGLLSGSHISVSGPAAGLTAVILVQLDQLG CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCC GNYAAFLLCIVFAGILQILFGVFKLGFFANFIPNNVILGLLAAIGAILIVTQLPYLFGLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DFSWKEVWTATPDTFIQKFDAGAALIGLLSLFLILAWDSSPLKKLALPSALIAVVLAAVF CCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NFVLISIGSSWAVQSNNLIQLPNILQAPEEVLVFPDFSYLAEPLIYTGAITLAIVASLET HHHHHHCCCCCEECCCCEEECCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LLNLEAADKLDPQKRSSPPNRELWAQGAGNIVSGLIGGMPVTSVIVRSSVNANTGARSKC HHCCHHHHCCCCHHCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHH STIIHGVLLLLAILFFVPLMNMIPLSALAAILIVTGFKLTHPKLFKQLYQKGWRQFLPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH ITLVAILLTDLLTGILVGLFTSSAFILYGNFNKGVRVYKEKHLHGIVTRIELPSQVTFLN HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHEECCCHHHHHH RSALISALEHIHKDQQLIIDATQCDSIDPDIYQVIQDYQNETAVKRQVDLKLIGFKQHYE HHHHHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHH EVDDAVLDIYISTRDLQRKLSPQQVITLLKEGNERFVKNERLQRDIYRQIRVTADEGQHP HHHHHHHEEEECHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCH IAAVLGCMDSRAPTEMIFDVGIGDLFSLRIAGNIAGQKVLGSLEFACQAKGSKVILVLGH HHHHHHHHCCCCCHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEC TDCGAVTSACQLRLQQKQISDVKEMPHIQYVLGPLMHSVESVYDIMQPRELNKTFVNQVT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AMNVHYNIQYIINNSTVLKDLLDRGEIAIVGAIYDVKTGHVEFLDA EEEEEEEEEEEECCCHHHHHHHCCCCEEEEEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2CO3
Specific reaction: H2CO3 = CO2 + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]