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The map label for this gene is ydfC [H]

Identifier: 213158877

GI number: 213158877

Start: 3682860

End: 3683762

Strand: Reverse

Name: ydfC [H]

Synonym: AB57_3576

Alternate gene names: 213158877

Gene position: 3683762-3682860 (Counterclockwise)

Preceding gene: 213158881

Following gene: 213158876

Centisome position: 90.95

GC content: 38.21

Gene sequence:

>903_bases
ATGGCAATTTCTCTTGCTGCCGAAACCCAGCCTCCCGCATTTAAGCTCTATTTGTGTATTGCTGTGACCGTCTTTTGTTG
GGGTTATTCCCCTATTGGCGTACATAGTGCTTTACATTCATATACACCACAGCACATTGCCTTGCTCCGCTTTTTGATTG
CATCATTTTTTTTACTGCTTTTGGTCATGAAAAAAGGCATTCAGCCTTTAAATTGGAAAGATGTTCCTGCACTTGCTGTA
TTAGGATTTTTCTCTGTAACCCTGCATCATTTGCTTATAAATACAGGGCAGCAATATGTGACTGCGGTTGCATCTAGTAT
TTTGAGTCAATCTATTCCGCTATTCACTTTTATTATTTCAGCTTTGCTTTTTAAGGAACAAATCAATTTCAAACAATGGT
TATGTATTTTATTGGGACTTTGCGGCGCTGTGTTGGTGGTCAGTGGAGATCATGGTTTTGGTGTACCGAGTCCTTATAGT
TTATTGATTGTTTTGGCTGCAATTGCATGGGGTCTCTACTTTAATTTATATAAGAAATTTGCTTTAAATTATGATGCTTT
GAGCATGATGTGCTACATCATTTGGTTCGGAACCATTCCTTTACTATTTTATAGTACTCATTTACCCCATGAAATTTTAC
ATGCTACTTGGCAAGCCAATATGTCGGTTGTCTTATTGGGTATTTTCCCAAGTGCGATGGCTTATGTGCTGTGGGGTTAT
GTACTTAAAAATATGCCATTAACGATTGCATCGAATTTTTTATATTGTTCGCCGATTGTCGCAATGAGTTTGGCAGTACT
TTTCTTAAATGAAAAACCATCAATGATGGTGCTGCTGGGTGGAGTAATTATTGTGGGGAGTTTGGTATGGATGAATTGGG
GGAATAGGCGTACTATCGAATAA

Upstream 100 bases:

>100_bases
ATTCACTTTTAATGAATATTTAACTCAATATAAGTTAATTTTATTCAACTATCTATGCGCATATGATGAAAGAGCTCCAT
TTCATTAGTGCAGATTTAAC

Downstream 100 bases:

>100_bases
GCTATGTCATGCGCTACTTGCTTTAAGAGAATGAAATGATTGTTGTTACCCTGACCTATAAAAAACCGTTAGCCGAAGTT
GATGCTGTACTGAAACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLVMKKGIQPLNWKDVPALAV
LGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQINFKQWLCILLGLCGAVLVVSGDHGFGVPSPYS
LLIVLAAIAWGLYFNLYKKFALNYDALSMMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGY
VLKNMPLTIASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRTIE

Sequences:

>Translated_300_residues
MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLVMKKGIQPLNWKDVPALAV
LGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQINFKQWLCILLGLCGAVLVVSGDHGFGVPSPYS
LLIVLAAIAWGLYFNLYKKFALNYDALSMMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGY
VLKNMPLTIASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRTIE
>Mature_299_residues
AISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLVMKKGIQPLNWKDVPALAVL
GFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQINFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSL
LIVLAAIAWGLYFNLYKKFALNYDALSMMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGYV
LKNMPLTIASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRTIE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33358; Mature: 33227

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLL
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVMKKGIQPLNWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIIS
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALLFKEQINFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSLLIVLAAIAWGLYFNLYKKF
HHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALNYDALSMMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGY
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
VLKNMPLTIASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRTIE
HHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLL
EEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]