Click here to switch to the map view.

The map label for this gene is yjgB [H]

Identifier: 213158757

GI number: 213158757

Start: 4013537

End: 4014565

Strand: Direct

Name: yjgB [H]

Synonym: AB57_3891

Alternate gene names: 213158757

Gene position: 4013537-4014565 (Clockwise)

Preceding gene: 213158756

Following gene: 213158759

Centisome position: 99.09

GC content: 45.58

Gene sequence:

>1029_bases
ATGAGCAATAATACGATTCAGGCTTATGCTGCAATGCAGGCAGGTGAAAAACTGGTCCCATACCAATTTGATGCAGGTGA
ATTACAACCGCATCAGGTTGAGGTAAAAGTTGAATACTGTGGTTTGTGTCATTCTGATATTTCTGTTTTAAATAATGAAT
GGCGCTCAACCGTGTACCCTGTAGTTGCAGGCCATGAAATTATTGGACGAATTGTTGCTTTAGGCTCAGAAGCCAAAGGA
CTACAAATTGGGCAACGTGTCGGTATTGGCTGGACCGCTGAGAGTTGCCAAGCCTGTGATGAGTGTATTGGTGGTCAGCA
AGTTCTTTGTACGGGCGAAAATGTCGCAACAATCGTGGGACATGCGGGTGGCTTTGCCGATAAGGTTCGTGCTGGTTGGC
AATGGGCCATTCCCCTTCCCGAAGATTTAGACCCCGAAAGTGCAGGCCCTTTACTTTGCGGCGGAATTACCGTTTTTGAC
CCATTACTCAAACACAAAATTCAGGCAACACATCACGTGGGTGTGATTGGTATTGGTGGTTTGGGTCATATCGCCATTAA
GCTCCTTAAAGCGTGGGGCTGTGAAATTACGGCGTTTAGTTCTAACCCAGATAAAACCGAAGAACTCAAAGCAATGGGAG
CCGACCATGTGGTGAATAGCCGCGATACAGAAGCGGTAAAAGCTCAAAAGGGTAAATTTGATTTATTGCTGAGTACCGTG
AATGTGACTTTAAATTGGCGTGCTTTCATTTCTACGCTAGCACCAAACGGTTCTTTGCACTTCTTAGGGCTCACACTAGA
ACCTGTTCCTGTTTCTGTAGGTTCTCTCATTGATGGTGCCAAATCAGTAACTGGTTCACCTACAGGTTCACCTGCCGCTC
TACGCCAACTTTTAAAGTTTGCCGCACGCAAAAAAATTGCGCCTCAAATTGAGCTATTTCCAATGTCACAGCTCAATGAA
GCAATTGAACGTCTACACTCAGGTCAAGCACGCTACCGCATTGTGCTTAAAGCAGACTTCGCAGAATAA

Upstream 100 bases:

>100_bases
TTATGCAGGCAGTGGGTATGGTCAATGACCATGAAAATGATTGTCAATTTAAAGCTTCCTAACCCACCAGAACGGTTCAA
ATCCGCTTAAGGAGTTTCCG

Downstream 100 bases:

>100_bases
AACTAACTCACTGTTTGCATCTGTTGTCGAGACCAGTCTGCCAAGCTCATAATTGCTTGGCGGACATCTGCTGTTAACTC
ATGGCCTGCGTTTAAACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSNNTIQAYAAMQAGEKLVPYQFDAGELQPHQVEVKVEYCGLCHSDISVLNNEWRSTVYPVVAGHEIIGRIVALGSEAKG
LQIGQRVGIGWTAESCQACDECIGGQQVLCTGENVATIVGHAGGFADKVRAGWQWAIPLPEDLDPESAGPLLCGGITVFD
PLLKHKIQATHHVGVIGIGGLGHIAIKLLKAWGCEITAFSSNPDKTEELKAMGADHVVNSRDTEAVKAQKGKFDLLLSTV
NVTLNWRAFISTLAPNGSLHFLGLTLEPVPVSVGSLIDGAKSVTGSPTGSPAALRQLLKFAARKKIAPQIELFPMSQLNE
AIERLHSGQARYRIVLKADFAE

Sequences:

>Translated_342_residues
MSNNTIQAYAAMQAGEKLVPYQFDAGELQPHQVEVKVEYCGLCHSDISVLNNEWRSTVYPVVAGHEIIGRIVALGSEAKG
LQIGQRVGIGWTAESCQACDECIGGQQVLCTGENVATIVGHAGGFADKVRAGWQWAIPLPEDLDPESAGPLLCGGITVFD
PLLKHKIQATHHVGVIGIGGLGHIAIKLLKAWGCEITAFSSNPDKTEELKAMGADHVVNSRDTEAVKAQKGKFDLLLSTV
NVTLNWRAFISTLAPNGSLHFLGLTLEPVPVSVGSLIDGAKSVTGSPTGSPAALRQLLKFAARKKIAPQIELFPMSQLNE
AIERLHSGQARYRIVLKADFAE
>Mature_341_residues
SNNTIQAYAAMQAGEKLVPYQFDAGELQPHQVEVKVEYCGLCHSDISVLNNEWRSTVYPVVAGHEIIGRIVALGSEAKGL
QIGQRVGIGWTAESCQACDECIGGQQVLCTGENVATIVGHAGGFADKVRAGWQWAIPLPEDLDPESAGPLLCGGITVFDP
LLKHKIQATHHVGVIGIGGLGHIAIKLLKAWGCEITAFSSNPDKTEELKAMGADHVVNSRDTEAVKAQKGKFDLLLSTVN
VTLNWRAFISTLAPNGSLHFLGLTLEPVPVSVGSLIDGAKSVTGSPTGSPAALRQLLKFAARKKIAPQIELFPMSQLNEA
IERLHSGQARYRIVLKADFAE

Specific function: Unknown

COG id: COG1064

COG function: function code R; Zn-dependent alcohol dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI87082401, Length=339, Percent_Identity=61.3569321533923, Blast_Score=406, Evalue=1e-114,
Organism=Escherichia coli, GI1786518, Length=340, Percent_Identity=35.8823529411765, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI87081918, Length=318, Percent_Identity=27.0440251572327, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790045, Length=274, Percent_Identity=26.2773722627737, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788075, Length=346, Percent_Identity=24.2774566473988, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082125, Length=197, Percent_Identity=28.9340101522843, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI226510992, Length=300, Percent_Identity=25.6666666666667, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788407, Length=271, Percent_Identity=26.9372693726937, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71988145, Length=319, Percent_Identity=29.7805642633229, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17562584, Length=328, Percent_Identity=27.4390243902439, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17562582, Length=319, Percent_Identity=25.3918495297806, Blast_Score=85, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6319949, Length=334, Percent_Identity=34.1317365269461, Blast_Score=156, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6323980, Length=328, Percent_Identity=31.7073170731707, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6323961, Length=316, Percent_Identity=28.7974683544304, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324486, Length=316, Percent_Identity=28.4810126582279, Blast_Score=122, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6323729, Length=352, Percent_Identity=26.9886363636364, Blast_Score=120, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6319621, Length=319, Percent_Identity=26.9592476489028, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI17737895, Length=378, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR006140
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 36543; Mature: 36412

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00059 ADH_ZINC ; PS00065 D_2_HYDROXYACID_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNTIQAYAAMQAGEKLVPYQFDAGELQPHQVEVKVEYCGLCHSDISVLNNEWRSTVYP
CCCCEEEEEEHHHCCCCCCCEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH
VVAGHEIIGRIVALGSEAKGLQIGQRVGIGWTAESCQACDECIGGQQVLCTGENVATIVG
HEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEE
HAGGFADKVRAGWQWAIPLPEDLDPESAGPLLCGGITVFDPLLKHKIQATHHVGVIGIGG
CCCCCHHHHCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHEEEEEEECC
LGHIAIKLLKAWGCEITAFSSNPDKTEELKAMGADHVVNSRDTEAVKAQKGKFDLLLSTV
HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEEEE
NVTLNWRAFISTLAPNGSLHFLGLTLEPVPVSVGSLIDGAKSVTGSPTGSPAALRQLLKF
EEEEEHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCHHHCCCCCCCCHHHHHHHHHH
AARKKIAPQIELFPMSQLNEAIERLHSGQARYRIVLKADFAE
HHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SNNTIQAYAAMQAGEKLVPYQFDAGELQPHQVEVKVEYCGLCHSDISVLNNEWRSTVYP
CCCEEEEEEHHHCCCCCCCEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH
VVAGHEIIGRIVALGSEAKGLQIGQRVGIGWTAESCQACDECIGGQQVLCTGENVATIVG
HEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEE
HAGGFADKVRAGWQWAIPLPEDLDPESAGPLLCGGITVFDPLLKHKIQATHHVGVIGIGG
CCCCCHHHHCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHEEEEEEECC
LGHIAIKLLKAWGCEITAFSSNPDKTEELKAMGADHVVNSRDTEAVKAQKGKFDLLLSTV
HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEEEE
NVTLNWRAFISTLAPNGSLHFLGLTLEPVPVSVGSLIDGAKSVTGSPTGSPAALRQLLKF
EEEEEHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCHHHCCCCCCCCHHHHHHHHHH
AARKKIAPQIELFPMSQLNEAIERLHSGQARYRIVLKADFAE
HHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]