| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is phbC [H]
Identifier: 213158627
GI number: 213158627
Start: 2673287
End: 2674435
Strand: Direct
Name: phbC [H]
Synonym: AB57_2581
Alternate gene names: 213158627
Gene position: 2673287-2674435 (Clockwise)
Preceding gene: 213158625
Following gene: 213158628
Centisome position: 66.0
GC content: 40.38
Gene sequence:
>1149_bases ATGAGTTTATTGCTTAAAGTTCGACAGAATGTTCCACAGGTACAGTCGATTAAAACATCTCTTAAAAAGCGTGCTGGTCA GAAAATACCTCACATGCTCTCCAATGCATCAGATCTGTTTTTTAGAGGGTCGGAAATTGCCCTGTCAGGAAAAACACCTT TTGATGTAATTTATAAGCATGAAATTATAAGCCTTCGCCATTATAGAAATGAGACAGAAGCATCAGCCAAACACCGTGTG CCGTTAGTGATTGTTCCACCTTTAGCTGTGAACATGCTCATTTACGATTTGTTTCCTACCCGCAGCCTGATACGTTATTT TTTAGATCAAGGTTTCGAGGTTTATTTAATAGACTGGGGTGTACCTACTCGCAATCAAGCCAAATACAATTTTGGCACCT ATGTAAAAGTCTTTATGCCTGAAATGTTAAAGCAAGTCCGTATACATAGTGGACAACAACAGCTTTCATTACATGGCTGG AGTTTAGGTGGCGCCCTTTCACTTTGCTATACCGCATTATTTAAAGATAAAGATATTAAGAATCTGATGATTCTTGCTTC CCCGATCGACACACATAAAGCAGGTTATATGGGTAAGCTCTATGGAAGTCTGACTAAACCTGCACAGTGGGTCCGTAAGC ATACGCCTTTTCGTATTCGCCAACATGTACCAAGTGAAGTGTTTCATATTCATGGATGGCAAAACACACTCGGTTTTAAA TTAACGGACCCCATTGGCAATTTAAAAACCTATTGGCAACTTCTTAAAAATCTGGATAACCGAGAATTTATTGTTGACCA CGCTACCTCTAGTTCATTTATCGACAATATGCTGGCCTATCCGGGTGGCGTTATGCGCGACATTATTTTACGTTTCTGGA TTGATAATGAACTCTCAACAGGTGTAATCAAATTTGGCGAACTTACAGCTTATTTAAAAGATATTGATTGTTCAGTGTTG GCTGTAGGTGGAGATACAGACATTATTGTGACCGCCGATGCTGTTAAGCCTCTTATGGATTTAATTAGTAGCCAAGATAA AACGTTCAAAACTGTACCCGGAGGCCATATGGGCGTAGTGTCCGGTAGCCAAGCTCCGACCTCTGTTTGGCCTGAAATGA GTAATTGGCTGGCTACACGTTCAGATTAA
Upstream 100 bases:
>100_bases GTCTTTTAGGTCACTGAACTCATCTTTTATTCCCTTTAATATCCGCAAAAGACCAGCTCGTTATTTGCTCTGGGCAACAT CTTTATAGGTTTTATATTCA
Downstream 100 bases:
>100_bases TCAATTTAAACGTTAATGAAAAACCAGCCTGTTAAACCTTAGGCTGGTTTTAATGCACACTAAATTTTTAAAGTTTTTGC ACAAATCTTCTAGAACTAAT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRNETEASAKHRV PLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWGVPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGW SLGGALSLCYTALFKDKDIKNLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFK LTDPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVL AVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPGGHMGVVSGSQAPTSVWPEMSNWLATRSD
Sequences:
>Translated_382_residues MSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRNETEASAKHRV PLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWGVPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGW SLGGALSLCYTALFKDKDIKNLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFK LTDPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVL AVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPGGHMGVVSGSQAPTSVWPEMSNWLATRSD >Mature_381_residues SLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRNETEASAKHRVP LVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWGVPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWS LGGALSLCYTALFKDKDIKNLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFKL TDPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVLA VGGDTDIIVTADAVKPLMDLISSQDKTFKTVPGGHMGVVSGSQAPTSVWPEMSNWLATRSD
Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR010125 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 43154; Mature: 43022
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKH CCEEHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHEEECCEEEECCCCCHHHHHHH EIISLRHYRNETEASAKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWG HHHHHHHHCCCHHHHHHHCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECC VPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFKDKDIK CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCC NLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFK EEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHCCCCHHEEEECCCCCCCEE LTDPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELST EECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC GVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPGGHMGVV CEEEHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCEEEECCCCCEEEE SGSQAPTSVWPEMSNWLATRSD CCCCCCCHHCHHHHHHHCCCCC >Mature Secondary Structure SLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKH CEEHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHEEECCEEEECCCCCHHHHHHH EIISLRHYRNETEASAKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWG HHHHHHHHCCCHHHHHHHCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECC VPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFKDKDIK CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCC NLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFK EEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHCCCCHHEEEECCCCCCCEE LTDPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELST EECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC GVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPGGHMGVV CEEEHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCEEEECCCCCEEEE SGSQAPTSVWPEMSNWLATRSD CCCCCCCHHCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1396692 [H]