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The map label for this gene is ykgB [H]

Identifier: 213158424

GI number: 213158424

Start: 2456530

End: 2457774

Strand: Reverse

Name: ykgB [H]

Synonym: AB57_2373

Alternate gene names: 213158424

Gene position: 2457774-2456530 (Counterclockwise)

Preceding gene: 213158427

Following gene: 213158423

Centisome position: 60.68

GC content: 39.68

Gene sequence:

>1245_bases
GTGAAAATAGATACTGATGTCAATACTGGATACGGCAAGGATACCGACAAAAATGGATACGCAAATATTAAGTATCGTGA
GCTAATTCAAAAATTAACAGCAACATTATCATTGACGCTTTTGTCATTTGGATGGGGCTCTACAGTAAACGCAGCACAAC
AACAAATCGCTTTAGTAGGAACCTGGACATCTATCCCAGATGCACCGCTTGTGCAAAAACCAGAAAAAGCCAGTGAAGGT
TTGTACCAGCTACAAGTTAATGCTGACGGGACCTTAACTCCTGTTAAGGTATTGAAAATGAAAAGTCCATCTTGGGTTGT
AAAATCGAAAGATGGCCGTTTTGCATATACCACTAATGAAGAAAATGAAGGGGCGGTAACGGCATTATCGGTTCAAAACG
GAAAGGTAGAGGTATTGAACACGGTAAATAGTCATGGCGGACATCCAACACATGCCTCTATCAGTTTAGATGGTAAATTC
CTATTTGTATCAAATTACTCTGCATTTGATAAAGGACGTGGTGGTGTCGCTGTTTTGCCAATTTTACCAAATGGTCATTT
GGGTGAAATGGTACAAAATATTGTTTTTGCGGAGGGTTCTGGTCATGTTAAAGGGCGTCAGGATAGTGGCCATGCCCATT
CGACAACTTTTAGCCCAGATGGTAAGTATTTATATGCAAGTGATCTTGGAAATGACAAAGTCTATGCTTTTCGTTACAAC
CCAAGCAAGCCTCAACCACTTGAAGCGGACAAGAGCCGAGATGTGAGTTTTAAGCATGGTTCTGGTCCACGTCATATGGT
CTTTTCACCAAATGGTAAACAGGCATACATTACCGCGGAAATGCGAAGTGAAATTGTGACGTTTAACGTACAAGATGGCC
ATTTGAAAAAAGTCGCTGAGCTAAAACTGGTTCACGAAGACAAAACACCTGAATTCAAGAGTGCAAGTGGAATTATTCTT
AGTCCAAATGGTAAGTATGTGATCGCTGCAAATCGTGGTGCGGACAACAAACTTTTGGTATTTAAAATCCAACAGAATGG
GCTGTTAGGTCAACCACAAGTTTATAAGGCCAATGGAATTGAACCACGTGCTTTTTCATTTGATGAGTCAGGTAAATATC
TGTATGTGACGAATGTTTATAGTAATAACATTAGCTTATTCCGTTTTGATACCAAAAATGGCTCATTAAAACCTTTAGGC
GATGCAGCTAAAATATCGACTCCAACTGATATCAAATTCTTTTAA

Upstream 100 bases:

>100_bases
GGCATTTTATAAACTAATTTTCAAAATCATTAAATGAAATTAGATTGTGAATACCTTATTGGTAAATGCAAATAAGGTAA
ATTTTTTTAAGGATATGCAT

Downstream 100 bases:

>100_bases
TAATTTTTCCTCACACTGATCCTGCAATATTTATAAGCTATTAGATTTTTCAGTGTTCATTGCTACAGATACTCAAACTT
GAAAGACAATCAAGATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKIDTDVNTGYGKDTDKNGYANIKYRELIQKLTATLSLTLLSFGWGSTVNAAQQQIALVGTWTSIPDAPLVQKPEKASEG
LYQLQVNADGTLTPVKVLKMKSPSWVVKSKDGRFAYTTNEENEGAVTALSVQNGKVEVLNTVNSHGGHPTHASISLDGKF
LFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGSGHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYN
PSKPQPLEADKSRDVSFKHGSGPRHMVFSPNGKQAYITAEMRSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSASGIIL
SPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYVTNVYSNNISLFRFDTKNGSLKPLG
DAAKISTPTDIKFF

Sequences:

>Translated_414_residues
MKIDTDVNTGYGKDTDKNGYANIKYRELIQKLTATLSLTLLSFGWGSTVNAAQQQIALVGTWTSIPDAPLVQKPEKASEG
LYQLQVNADGTLTPVKVLKMKSPSWVVKSKDGRFAYTTNEENEGAVTALSVQNGKVEVLNTVNSHGGHPTHASISLDGKF
LFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGSGHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYN
PSKPQPLEADKSRDVSFKHGSGPRHMVFSPNGKQAYITAEMRSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSASGIIL
SPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYVTNVYSNNISLFRFDTKNGSLKPLG
DAAKISTPTDIKFF
>Mature_414_residues
MKIDTDVNTGYGKDTDKNGYANIKYRELIQKLTATLSLTLLSFGWGSTVNAAQQQIALVGTWTSIPDAPLVQKPEKASEG
LYQLQVNADGTLTPVKVLKMKSPSWVVKSKDGRFAYTTNEENEGAVTALSVQNGKVEVLNTVNSHGGHPTHASISLDGKF
LFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGSGHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYN
PSKPQPLEADKSRDVSFKHGSGPRHMVFSPNGKQAYITAEMRSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSASGIIL
SPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYVTNVYSNNISLFRFDTKNGSLKPLG
DAAKISTPTDIKFF

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=340, Percent_Identity=27.9411764705882, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 45140; Mature: 45140

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDTDVNTGYGKDTDKNGYANIKYRELIQKLTATLSLTLLSFGWGSTVNAAQQQIALVG
CEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEE
TWTSIPDAPLVQKPEKASEGLYQLQVNADGTLTPVKVLKMKSPSWVVKSKDGRFAYTTNE
EECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEECCC
ENEGAVTALSVQNGKVEVLNTVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLP
CCCCEEEEEEECCCCEEEEEEHHCCCCCCCEEEEEECCEEEEEECCCHHHCCCCCEEEEE
ILPNGHLGEMVQNIVFAEGSGHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYN
ECCCCHHHHHHHHEEEECCCCCEECCCCCCCCCCCEECCCCCEEEEECCCCCCEEEEEEC
PSKPQPLEADKSRDVSFKHGSGPRHMVFSPNGKQAYITAEMRSEIVTFNVQDGHLKKVAE
CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCEEEEEEECCCCHHEEEE
LKLVHEDKTPEFKSASGIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGI
EEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCC
EPRAFSFDESGKYLYVTNVYSNNISLFRFDTKNGSLKPLGDAAKISTPTDIKFF
CCCEEECCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEC
>Mature Secondary Structure
MKIDTDVNTGYGKDTDKNGYANIKYRELIQKLTATLSLTLLSFGWGSTVNAAQQQIALVG
CEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEE
TWTSIPDAPLVQKPEKASEGLYQLQVNADGTLTPVKVLKMKSPSWVVKSKDGRFAYTTNE
EECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEECCC
ENEGAVTALSVQNGKVEVLNTVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLP
CCCCEEEEEEECCCCEEEEEEHHCCCCCCCEEEEEECCEEEEEECCCHHHCCCCCEEEEE
ILPNGHLGEMVQNIVFAEGSGHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYN
ECCCCHHHHHHHHEEEECCCCCEECCCCCCCCCCCEECCCCCEEEEECCCCCCEEEEEEC
PSKPQPLEADKSRDVSFKHGSGPRHMVFSPNGKQAYITAEMRSEIVTFNVQDGHLKKVAE
CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEECCCEEEEEEECCCCHHEEEE
LKLVHEDKTPEFKSASGIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGI
EEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCC
EPRAFSFDESGKYLYVTNVYSNNISLFRFDTKNGSLKPLGDAAKISTPTDIKFF
CCCEEECCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]