Click here to switch to the map view.

The map label for this gene is rseP [C]

Identifier: 213158369

GI number: 213158369

Start: 2399659

End: 2401014

Strand: Reverse

Name: rseP [C]

Synonym: AB57_2315

Alternate gene names: 213158369

Gene position: 2401014-2399659 (Counterclockwise)

Preceding gene: 213158370

Following gene: 213158368

Centisome position: 59.28

GC content: 38.27

Gene sequence:

>1356_bases
ATGAATGCACTGTTTATGATTGCAGCGGCAGCTCTTTTACTTGGGCCTCTAATTGCAATCCATGAGTTTGGCCATTACTG
GGTTGCGCGAAAACTTGGTGTTAAAGTTTTAGTTTACTCAATTGGGTTTGGACCAACTTTACTGAAATGGACGTCTAAGA
AGTCTGGTATTAAATATCAGCTTTCTGCCTTACCTTTAGGCGGCTATGTCAAAATGTTGGACGAGCGAGAAGGTAATGTG
GCAGAACAAGATCTACCATATGCTTTTAACCGGCAAAAACCGTGGAAACGTATAGCGATTGTTGCTGCTGGACCATTAAT
TAACTTGATTTTTGCCGTACTCCTCTTTTGGATTTTGTTTTTACCAGCCCAAGAACAATTAAATACTAAAATTGGCAAAA
TTATTCCAAACTCTCCAGCTGCAGCAGCCCAGTTACATGTAGGTGACAAAATTATTGCTGTTGATGGGAAAGAGACAACA
ACATGGGAAAAGCTAAACTTTGCTTTGATTGATCGAGTTGGGGAAACAGGTACTGTAAATATTGATGTGGACCGTGCTGG
TTACCGAAAAAATTTTGTATTACCAATTAAAGTATTTTTAAAAAATCAAAATGAATCTGCACTGGACGTATTAGGTTTCT
TACCTTATCGACCTGTGATTCCTGCTGTTGTAACAGAGTTAACGGAAGATGGTGCGGCGATTCGTCAAGGGGTGAAAGTG
GGCGATCGTATTGTTGCGATTGATGGCCAGCCTATGAAAGATTGGTTCGACGTGGTAGAAGTTGTCCAGCGTTCCCCAGA
AAAGTTACTTAAGATTGATGTCTTACGTCATGAACAACTAGTACATTTACAAGTTATGCCACAAGGTAAGCGTGATAGCA
TGGGGCAGGTAAATGGAGTACTTGGTGTAAAAAGTGATGCTGGAAAAATTACAATTCCTGACGAATATAAGCAAACAATT
CAATATACTCCAATACAAGCTTTTGAAATGGCACTTGATAAAACTGGCCAAATCTCTAGCATGATTTTGAATTCAATAGT
AAAAATGGTTAAGGGACTAATTGGATTAGAAAATCTTTCTGGGCCAATTACCATTGCAAAAGTAGCTGGCCAAAGTGCAG
AAATGGGTTGGGAAACCTTTATCTCTTTTATGGCTTTAATGAGTGTAAGTCTTGGAATTTTAAACTTATTACCAATTCCA
ATGTTAGATGGTGGTCATCTAGTGTATTACATTATTGAAGCTATTCGTGGGAAGCCTGTTTCTGAACAAATACAAATGTT
TGGTCTAAAAATTGGTATGGTACTGCTCGGTAGTATGATGCTTTTAGCTTTATTTAATGACTTTATGCGTTTGTAA

Upstream 100 bases:

>100_bases
TTAGAGAATGCAGCGGCTGAAAGCATCGAGTGCATTTTAGATAAAGATAAAGTGGCCCGATCTGTAGCTCAGCAATATAT
ATCAAGTATTGGAGGCTGAA

Downstream 100 bases:

>100_bases
ACGTATATGGATTTATAACTTACTGGAAAAAACTGGCATGCGGCACACACATTTTTTAATGCCTTTGGCACTTGTTAGCG
CTATGGCAGCGGTACAACAA

Product: peptidase M50, putative membrane-associated zinc metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MNALFMIAAAALLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLLKWTSKKSGIKYQLSALPLGGYVKMLDEREGNV
AEQDLPYAFNRQKPWKRIAIVAAGPLINLIFAVLLFWILFLPAQEQLNTKIGKIIPNSPAAAAQLHVGDKIIAVDGKETT
TWEKLNFALIDRVGETGTVNIDVDRAGYRKNFVLPIKVFLKNQNESALDVLGFLPYRPVIPAVVTELTEDGAAIRQGVKV
GDRIVAIDGQPMKDWFDVVEVVQRSPEKLLKIDVLRHEQLVHLQVMPQGKRDSMGQVNGVLGVKSDAGKITIPDEYKQTI
QYTPIQAFEMALDKTGQISSMILNSIVKMVKGLIGLENLSGPITIAKVAGQSAEMGWETFISFMALMSVSLGILNLLPIP
MLDGGHLVYYIIEAIRGKPVSEQIQMFGLKIGMVLLGSMMLLALFNDFMRL

Sequences:

>Translated_451_residues
MNALFMIAAAALLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLLKWTSKKSGIKYQLSALPLGGYVKMLDEREGNV
AEQDLPYAFNRQKPWKRIAIVAAGPLINLIFAVLLFWILFLPAQEQLNTKIGKIIPNSPAAAAQLHVGDKIIAVDGKETT
TWEKLNFALIDRVGETGTVNIDVDRAGYRKNFVLPIKVFLKNQNESALDVLGFLPYRPVIPAVVTELTEDGAAIRQGVKV
GDRIVAIDGQPMKDWFDVVEVVQRSPEKLLKIDVLRHEQLVHLQVMPQGKRDSMGQVNGVLGVKSDAGKITIPDEYKQTI
QYTPIQAFEMALDKTGQISSMILNSIVKMVKGLIGLENLSGPITIAKVAGQSAEMGWETFISFMALMSVSLGILNLLPIP
MLDGGHLVYYIIEAIRGKPVSEQIQMFGLKIGMVLLGSMMLLALFNDFMRL
>Mature_451_residues
MNALFMIAAAALLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLLKWTSKKSGIKYQLSALPLGGYVKMLDEREGNV
AEQDLPYAFNRQKPWKRIAIVAAGPLINLIFAVLLFWILFLPAQEQLNTKIGKIIPNSPAAAAQLHVGDKIIAVDGKETT
TWEKLNFALIDRVGETGTVNIDVDRAGYRKNFVLPIKVFLKNQNESALDVLGFLPYRPVIPAVVTELTEDGAAIRQGVKV
GDRIVAIDGQPMKDWFDVVEVVQRSPEKLLKIDVLRHEQLVHLQVMPQGKRDSMGQVNGVLGVKSDAGKITIPDEYKQTI
QYTPIQAFEMALDKTGQISSMILNSIVKMVKGLIGLENLSGPITIAKVAGQSAEMGWETFISFMALMSVSLGILNLLPIP
MLDGGHLVYYIIEAIRGKPVSEQIQMFGLKIGMVLLGSMMLLALFNDFMRL

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=453, Percent_Identity=41.0596026490066, Blast_Score=328, Evalue=5e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 49719; Mature: 49719

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALFMIAAAALLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLLKWTSKKSGIKYQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHEEECCCCCCCEEE
LSALPLGGYVKMLDEREGNVAEQDLPYAFNRQKPWKRIAIVAAGPLINLIFAVLLFWILF
EEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
LPAQEQLNTKIGKIIPNSPAAAAQLHVGDKIIAVDGKETTTWEKLNFALIDRVGETGTVN
CCCHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE
IDVDRAGYRKNFVLPIKVFLKNQNESALDVLGFLPYRPVIPAVVTELTEDGAAIRQGVKV
EEECCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCC
GDRIVAIDGQPMKDWFDVVEVVQRSPEKLLKIDVLRHEQLVHLQVMPQGKRDSMGQVNGV
CCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCE
LGVKSDAGKITIPDEYKQTIQYTPIQAFEMALDKTGQISSMILNSIVKMVKGLIGLENLS
EEECCCCCEEECCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GPITIAKVAGQSAEMGWETFISFMALMSVSLGILNLLPIPMLDGGHLVYYIIEAIRGKPV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCH
SEQIQMFGLKIGMVLLGSMMLLALFNDFMRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNALFMIAAAALLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLLKWTSKKSGIKYQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHEEECCCCCCCEEE
LSALPLGGYVKMLDEREGNVAEQDLPYAFNRQKPWKRIAIVAAGPLINLIFAVLLFWILF
EEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
LPAQEQLNTKIGKIIPNSPAAAAQLHVGDKIIAVDGKETTTWEKLNFALIDRVGETGTVN
CCCHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE
IDVDRAGYRKNFVLPIKVFLKNQNESALDVLGFLPYRPVIPAVVTELTEDGAAIRQGVKV
EEECCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCC
GDRIVAIDGQPMKDWFDVVEVVQRSPEKLLKIDVLRHEQLVHLQVMPQGKRDSMGQVNGV
CCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCE
LGVKSDAGKITIPDEYKQTIQYTPIQAFEMALDKTGQISSMILNSIVKMVKGLIGLENLS
EEECCCCCEEECCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GPITIAKVAGQSAEMGWETFISFMALMSVSLGILNLLPIPMLDGGHLVYYIIEAIRGKPV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCH
SEQIQMFGLKIGMVLLGSMMLLALFNDFMRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]