| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is ydjC [C]
Identifier: 213158306
GI number: 213158306
Start: 3126222
End: 3127016
Strand: Direct
Name: ydjC [C]
Synonym: AB57_3033
Alternate gene names: 213158306
Gene position: 3126222-3127016 (Clockwise)
Preceding gene: 213158305
Following gene: 213158307
Centisome position: 77.18
GC content: 38.99
Gene sequence:
>795_bases ATGGCAAAGGTGTGCTATTGCGCAGATGACTTTGCAATGAATGCAGAAATATCTGACGCAATTATTCAACTTATTGAACA AGGTGCGCTTCAAGCCACCTCATGTATGACCCAATCTGATTTATGGGAAACTGCTGCTGCCAAATTAAAACCGTTTAGTG ATCGAGTTGATATCGGTTTACATTTAAATCTTACCCATGCTTTCGCTTCGGGTAATCTGGTTTTTCCCTTACCTATGCTT ATAGTCCGAGCATGGTCTGCAAGTCTTAATCGCGAATTAATCACTCAATGTATTGAGGAGCAATGGGACTTATTTGTTTC AGTATTAGGAAAACAACCTGACTTTATAGATGGTCATCAACACATTCATCAATTTCCATTTATACGTGATATTTTGCTGC AATTACTAAAAGAGAAAAAATTTACGGGTTGGATTCGAAATTTACAACAGCCGATCAATCCCCCTCCTTACCGTTTTAAA ACTCGTATGCTCTCAGCATTAGGTTCTAACTCTTTGGCAAAAGCTTGCCAGACATATCACTTTAATCAAAATAGCCAATT TGCTGGCATCTATGATTTCAAACTGACCAATTATGGCGAACTCAATCAATATTGGCTTGCGAATGCAAAAGACCATTTAC TGATTATGTGCCATCCAGCACTTGCACAATCAAATGATCAAGATCCAATTCAACACGCCCGAATTCAAGAATATCAATAC TTCTGTTCGGCTCAGTTCCAACTTGATTGTCAACAATACGGTATCCAGCTCACCAGACTAGGGGCAATGCAATGA
Upstream 100 bases:
>100_bases TAAGTTGGAATTAAGGAAATTTCTCCATATTAAAAACGTATAGTTTTTCAGCAGCTAAGCAGAATAATTCTGTAACCCTG CCCTATGGTGGAATTTAGAT
Downstream 100 bases:
>100_bases ATATAAAACCCTTTTTATCCTGCGTTGTTCCAGCCTACAACGAAGCAGAAAATTTAAAAACCTTTATTCCTGCTTTGGCA AATAGTCTAAAACAGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: YdjC-Like Protein; Cellobiose Phosphorylase; Exported Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAKVCYCADDFAMNAEISDAIIQLIEQGALQATSCMTQSDLWETAAAKLKPFSDRVDIGLHLNLTHAFASGNLVFPLPML IVRAWSASLNRELITQCIEEQWDLFVSVLGKQPDFIDGHQHIHQFPFIRDILLQLLKEKKFTGWIRNLQQPINPPPYRFK TRMLSALGSNSLAKACQTYHFNQNSQFAGIYDFKLTNYGELNQYWLANAKDHLLIMCHPALAQSNDQDPIQHARIQEYQY FCSAQFQLDCQQYGIQLTRLGAMQ
Sequences:
>Translated_264_residues MAKVCYCADDFAMNAEISDAIIQLIEQGALQATSCMTQSDLWETAAAKLKPFSDRVDIGLHLNLTHAFASGNLVFPLPML IVRAWSASLNRELITQCIEEQWDLFVSVLGKQPDFIDGHQHIHQFPFIRDILLQLLKEKKFTGWIRNLQQPINPPPYRFK TRMLSALGSNSLAKACQTYHFNQNSQFAGIYDFKLTNYGELNQYWLANAKDHLLIMCHPALAQSNDQDPIQHARIQEYQY FCSAQFQLDCQQYGIQLTRLGAMQ >Mature_263_residues AKVCYCADDFAMNAEISDAIIQLIEQGALQATSCMTQSDLWETAAAKLKPFSDRVDIGLHLNLTHAFASGNLVFPLPMLI VRAWSASLNRELITQCIEEQWDLFVSVLGKQPDFIDGHQHIHQFPFIRDILLQLLKEKKFTGWIRNLQQPINPPPYRFKT RMLSALGSNSLAKACQTYHFNQNSQFAGIYDFKLTNYGELNQYWLANAKDHLLIMCHPALAQSNDQDPIQHARIQEYQYF CSAQFQLDCQQYGIQLTRLGAMQ
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30206; Mature: 30075
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVCYCADDFAMNAEISDAIIQLIEQGALQATSCMTQSDLWETAAAKLKPFSDRVDIGL CCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE HLNLTHAFASGNLVFPLPMLIVRAWSASLNRELITQCIEEQWDLFVSVLGKQPDFIDGHQ EEEEEEHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH HIHQFPFIRDILLQLLKEKKFTGWIRNLQQPINPPPYRFKTRMLSALGSNSLAKACQTYH HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHC FNQNSQFAGIYDFKLTNYGELNQYWLANAKDHLLIMCHPALAQSNDQDPIQHARIQEYQY CCCCCCEEEEEEEEECCCCCCCHHHCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHHH FCSAQFQLDCQQYGIQLTRLGAMQ HHCCCEEECHHHHCEEEECCCCCC >Mature Secondary Structure AKVCYCADDFAMNAEISDAIIQLIEQGALQATSCMTQSDLWETAAAKLKPFSDRVDIGL CEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE HLNLTHAFASGNLVFPLPMLIVRAWSASLNRELITQCIEEQWDLFVSVLGKQPDFIDGHQ EEEEEEHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH HIHQFPFIRDILLQLLKEKKFTGWIRNLQQPINPPPYRFKTRMLSALGSNSLAKACQTYH HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHC FNQNSQFAGIYDFKLTNYGELNQYWLANAKDHLLIMCHPALAQSNDQDPIQHARIQEYQY CCCCCCEEEEEEEEECCCCCCCHHHCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHHH FCSAQFQLDCQQYGIQLTRLGAMQ HHCCCEEECHHHHCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA