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The map label for this gene is yfdH [C]

Identifier: 213158307

GI number: 213158307

Start: 3127013

End: 3127993

Strand: Direct

Name: yfdH [C]

Synonym: AB57_3034

Alternate gene names: 213158307

Gene position: 3127013-3127993 (Clockwise)

Preceding gene: 213158306

Following gene: 213158308

Centisome position: 77.2

GC content: 37.61

Gene sequence:

>981_bases
ATGAATATAAAACCCTTTTTATCCTGCGTTGTTCCAGCCTACAACGAAGCAGAAAATTTAAAAACCTTTATTCCTGCTTT
GGCAAATAGTCTAAAACAGCAAAATTTTAGCTATGAAATTATTGTGGTAGATGATGGAAGTAAAGACGATACCATTCCAA
TTTTACAAACAATGATTGAGGATTATCCTTTAGTTGTGCTGGAGCTTTCACGGAACTTTGGCAAAGAAGCAGCTTTAAGT
GCCGGTTTAGACCATGTGACTGGTGAAGTTGCTCTACTGATTGAAGCTGATTTTCAACATCCATTTGAAGCAATTCCAAC
CATGATTAATCTTTGGAAAAATGGTTATGACATGGTCTATGGTATTCGTAATCGTACAACCGAATCATGGCTTAAACGTG
TTCTAACCCAAGCTTATTACCGCATTTTAAACTTAAGTTCACCTATTGATATTCCAGAAAGTGCTGGAGACTTCCGGCTA
CTCGATGCAAAAGTTGTTGAAGCCATCAAACAATTACCAGAAAAAAATCGTTATATGAAAGGTCTATATGCTTGGGTTGG
CTTTAAAAGTATAGGCATTAATTTTTCTGAGCAAGAACGTCAACATGGCCGTTCTAGCTTCAACTTAAAATCTCTTTTTA
ACTTAGCCATGTCAGGTTTAACGGGTTTTTCTGATTTACCTTTACGCGTATGTATTTACTTAGGTGCAATTCTGGCCTTA
GGTGCGATGAGCTACGGAGTGTGGATTATCATTAAAACTTTGATTGAGGGAATTTCCATTCCGGGCTGGGCAACACTTGC
GGCAGGTATGACGCTATTAGGTGGCATTCAATTGTTATTCATTGGAATTTTAGGTGAATACATTGGCCGCATTTATGCTG
AAGTTAAAAACCGCCCAAAATATATTATTTCTACCGAACATTCTCGTACTAAGCAGGAACATTCAATCGCCCACCAAGAA
AATACGTTCTCTAGTTTCTAA

Upstream 100 bases:

>100_bases
AACACGCCCGAATTCAAGAATATCAATACTTCTGTTCGGCTCAGTTCCAACTTGATTGTCAACAATACGGTATCCAGCTC
ACCAGACTAGGGGCAATGCA

Downstream 100 bases:

>100_bases
TGTTTGCTCATATTCTTCAGCTTGCGCGGTTTACGACTACAGGGACCGCAGCAGCACTTACTCATTATAGTGTAGCCATG
CTTCTATTTAAGAAACATGT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNIKPFLSCVVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIEDYPLVVLELSRNFGKEAALS
AGLDHVTGEVALLIEADFQHPFEAIPTMINLWKNGYDMVYGIRNRTTESWLKRVLTQAYYRILNLSSPIDIPESAGDFRL
LDAKVVEAIKQLPEKNRYMKGLYAWVGFKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILAL
GAMSYGVWIIIKTLIEGISIPGWATLAAGMTLLGGIQLLFIGILGEYIGRIYAEVKNRPKYIISTEHSRTKQEHSIAHQE
NTFSSF

Sequences:

>Translated_326_residues
MNIKPFLSCVVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIEDYPLVVLELSRNFGKEAALS
AGLDHVTGEVALLIEADFQHPFEAIPTMINLWKNGYDMVYGIRNRTTESWLKRVLTQAYYRILNLSSPIDIPESAGDFRL
LDAKVVEAIKQLPEKNRYMKGLYAWVGFKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILAL
GAMSYGVWIIIKTLIEGISIPGWATLAAGMTLLGGIQLLFIGILGEYIGRIYAEVKNRPKYIISTEHSRTKQEHSIAHQE
NTFSSF
>Mature_326_residues
MNIKPFLSCVVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIEDYPLVVLELSRNFGKEAALS
AGLDHVTGEVALLIEADFQHPFEAIPTMINLWKNGYDMVYGIRNRTTESWLKRVLTQAYYRILNLSSPIDIPESAGDFRL
LDAKVVEAIKQLPEKNRYMKGLYAWVGFKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILAL
GAMSYGVWIIIKTLIEGISIPGWATLAAGMTLLGGIQLLFIGILGEYIGRIYAEVKNRPKYIISTEHSRTKQEHSIAHQE
NTFSSF

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=174, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1788692, Length=300, Percent_Identity=44.3333333333333, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1788588, Length=304, Percent_Identity=31.25, Blast_Score=169, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI71999402, Length=129, Percent_Identity=35.6589147286822, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24585265, Length=172, Percent_Identity=33.1395348837209, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36509; Mature: 36509

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKPFLSCVVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIE
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHC
DYPLVVLELSRNFGKEAALSAGLDHVTGEVALLIEADFQHPFEAIPTMINLWKNGYDMVY
CCCEEEEEEHHCCCHHHHHHHCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE
GIRNRTTESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDAKVVEAIKQLPEKNRYMK
EHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHHH
GLYAWVGFKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILAL
HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GAMSYGVWIIIKTLIEGISIPGWATLAAGMTLLGGIQLLFIGILGEYIGRIYAEVKNRPK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YIISTEHSRTKQEHSIAHQENTFSSF
EEEECCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNIKPFLSCVVPAYNEAENLKTFIPALANSLKQQNFSYEIIVVDDGSKDDTIPILQTMIE
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHC
DYPLVVLELSRNFGKEAALSAGLDHVTGEVALLIEADFQHPFEAIPTMINLWKNGYDMVY
CCCEEEEEEHHCCCHHHHHHHCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEE
GIRNRTTESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDAKVVEAIKQLPEKNRYMK
EHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHHH
GLYAWVGFKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILAL
HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GAMSYGVWIIIKTLIEGISIPGWATLAAGMTLLGGIQLLFIGILGEYIGRIYAEVKNRPK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YIISTEHSRTKQEHSIAHQENTFSSF
EEEECCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]