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The map label for this gene is recO [H]

Identifier: 213158239

GI number: 213158239

Start: 3055151

End: 3055864

Strand: Reverse

Name: recO [H]

Synonym: AB57_2958

Alternate gene names: 213158239

Gene position: 3055864-3055151 (Counterclockwise)

Preceding gene: 213158240

Following gene: 213158238

Centisome position: 75.44

GC content: 39.08

Gene sequence:

>714_bases
ATGATGCGCAATGAAGTCCTACATGGATATATGATTCACCATCGTAAATACCGTGAAAAAAGCCATATTGTGCATCTCTT
CACTCAAGAATATGGGCGGGTTGATGGTATTTTAAGACAGACTCCGCCTCCTCAATATCAGCCAATCCGGTTGCAAGCCA
CAGGCAAAAGTGAGCTCAAAAATTTTACAAAGCTGGAAATACTAAATCAGCCGGTTTTCTTTTTTGGCGATGCTTTTTTT
GCAGGGTTCTATTTAAACGAAATTGTTCTTAGACTTTGCCCACTAGAAGAGGCAATGCCACAAACTTTTGAACAATACCA
GTTAACGCTGCTTCAACTCCAGCAGCTGTCTTCTCATGAAAATCCGGATTTATTTCTTAGACAGATTTTGAGACAATTTG
AGCATATCTTGCTTGCAGAGCTAGGCTATGCGATTGATTTTTCAATTGATAGCTCACAAAAAGAAATTTTGCCTCAACAG
TTTTATCAGTTTCAAGTGACTGAAGGCTTTGCCCCCATTGTTCAGTCAAGTCGCTCATCTTTGTCAGGAAAAGCAATTTT
ATCCATGCTGGATTATGAGCAGGGACAGGATTTTTCTCACGAACAATTGCAATTATTAGGTAAACTATACCGTCAAATGA
TTACATCGCTTTTAGGTGACCGTCCCCTAAAAAGTCGACAATTGTGGATTCAAAATACTCAAACTCAATCGTAA

Upstream 100 bases:

>100_bases
AGGTGTAGTGAAGGGTACAGCTGCTGTTGTAGGGGCTGTAATTCCTGATGGTGATGATGACGATAAAAAAGAAAAAGAAT
CTGAGGAATAGTTTCTTTTT

Downstream 100 bases:

>100_bases
TTAGGATTTTTTTATGGCTGCATTGCTTGGTGTAAACATAGACCATGTTGCTACTTTAAGACAGGCGCGCGGTAATGCTT
ACCCAGACCCTGTAGAAGCT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MMRNEVLHGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELKNFTKLEILNQPVFFFGDAFF
AGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQ
FYQFQVTEGFAPIVQSSRSSLSGKAILSMLDYEQGQDFSHEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQTQS

Sequences:

>Translated_237_residues
MMRNEVLHGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELKNFTKLEILNQPVFFFGDAFF
AGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQ
FYQFQVTEGFAPIVQSSRSSLSGKAILSMLDYEQGQDFSHEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQTQS
>Mature_237_residues
MMRNEVLHGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELKNFTKLEILNQPVFFFGDAFF
AGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHENPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQ
FYQFQVTEGFAPIVQSSRSSLSGKAILSMLDYEQGQDFSHEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQTQS

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=234, Percent_Identity=24.3589743589744, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27801; Mature: 27801

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRNEVLHGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHH
NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQVTEGFAPIVQSSRSS
CHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHC
LSGKAILSMLDYEQGQDFSHEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQTQS
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MMRNEVLHGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHH
NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILPQQFYQFQVTEGFAPIVQSSRSS
CHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHC
LSGKAILSMLDYEQGQDFSHEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQTQS
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA