| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is icd [H]
Identifier: 213158202
GI number: 213158202
Start: 3014242
End: 3016479
Strand: Reverse
Name: icd [H]
Synonym: AB57_2921
Alternate gene names: 213158202
Gene position: 3016479-3014242 (Counterclockwise)
Preceding gene: 213158203
Following gene: 213158200
Centisome position: 74.47
GC content: 42.85
Gene sequence:
>2238_bases ATGGCTGGTGAAAAGTCAACCATCATTTACACACTGACTGACGAGGCGCCATTATTGGCGACTTATTCGCTACTGCCGAT CATTGAGACCTTTACTAAGCCAGCTGGTATCGAGATTGTTAAAAGTGACATCTCTGTAGCTGCACGTGTGCTCGCAGAAT TCGCTGACTACCTAAGTGAAGAGCAAAAGGTATCCGACAACCTTGCTGAGCTAGGTCGTCTTACACAAGATCCAGATACT AACATTATCAAACTCCCAAATATTAGTGCCTCTGTTGCGCAATTGACAGCATGTATTAAAGAACTTCAATCTAAAGGTTA TGCAATTCCTGACTATCCGGAAAACCCAGCGACTGAAGAAGAAAAAACAATCAAAGCTCGTTATGGCAAATGCCTAGGTT CAGCAGTAAACCCTGTTCTTCGTGAAGGTAACTCTGACCGTCGTGCTCCTGCTGCCGTTAAAAATTACGCTAAGAAACAC CCTCACTCAATGAGCGAGTGGAAACAATGGTCGCAAACTCACGTTTCACACATGGAAGAAGGTGACTTCTACCACGGTGA AAAGTCAATGACACTTGACCGTCCACGCAATGTAAAAATGGAACTTATCACAAACAGTGGTAAGAGCATTGTTCTTAAGC CAAAAGTTGCGCTTCAAGAAGGCGAAATCATTGACTCAATGTTTATGAGCAAAAAAGCGCTTTGCGACTTCTACGAGAAA CAACTTGATGACTGCCGCGAAGCAGGAATTTTATTCTCATTACACGTAAAAGCGACAATGATGAAAGTTTCACACCCGAT CGTTTTCGGTCATTGTGTGAAAATCTACTATAAAGAAGCTTTCGAAAAACACGGTAAGTTGTTTGACGAATTAGGTATTA ACGTAAATAACGGTATGGCTGGGTTATACGAGAAAATCGAAACTCTTCCAACCTCATTACGTGAAGAAATCATTGAAGAT TTACATGCTTGCCAAGAACACCGTCCTGCACTTGCGATGGTTGATTCAGCAAAAGGTATCACTAACTTCCATTCACCTAA TGACATCATCGTAGATGCTTCTATGCCTGCAATGATCCGTGCTGGTGGTAAAATGTGGGGTGCTGATGGTAAGCAATACG ATGCTAAGGCAGTAATGCCAGAATCAACATTTGCCCGTATTTACCAAGAAATGATCAATTTCTGTAAATGGCATGGTAAC TTTGATCCAAAAACAATGGGTACAGTACCAAACGTTGGTTTGATGGCTCAAAAAGCTGAAGAATACGGTTCTCACGACAA GACTTTTGAAATTCCTGAAGCAGGTATTGCAAACATTACTGATTTTGACACTGGTGAAGTGTTATTGACTCAAAATGTTG AAGAAGGCGATATCTGGCGTATGTGTCAGGTGAAAGACGCTCCGATTCGTGACTGGGTAAAACTTGCAGTAACTCGTGCA CGTAACTCAGGCATGCCTGCGATCTTCTGGCTTGACCCATACCGTCCACACGAAAATGAATTAATCAAGAAAGTACAGAA GTACTTAAAAGATCACGATACGACTGGTCTTGATATCCAGATTATGTCTCAAGTACGTGCAATGCGTTACACACTTGAGC GTGTAGTTCGTGGCCTCGATACAATTTCTGTAACCGGTAACATCTTACGCGACTACTTAACTGACTTGTTCCCAATTATG GAACTTGGTACTTCTGCAAAAATGTTGTCTATCGTTCCGCTTATGGCGGGTGGTGGCATGTACGAAACTGGTGCGGGTGG TTCAGCACCTAAACACGTACAACAACTTGTTGAAGAAAACCACTTACGTTGGGATTCGCTTGGTGAGTTCCTTGCGCTTG CAGTTTCTCTAGAAGAAATGGGTATTAAAGAAAATAATGCTCGTGCGAAGTTACTTGCGAAGACACTTGATGAAGCGACT GGTAAATTGCTTGACAATGACAAGTCTCCATCACGTCGTACAGGCGAACTTGACAATCGTGGCAGCCACTTCTACTTGTC ACTTTACTGGGCAGAAGCACTTGCTGCACAGAACGAAGATGCTGAGTTGAAAGCTAAATTTGCTCCACTTGCAAAAGCAT TAGCTGAAAACGAACAGAAGATCGTTGCTGAGCTTGCTCAAGTACAAGGTAAACCAGCTGATATCGGTGGTTACTATGCA GTTGACCCAGCGAAAGTAAGCGCTGTAATGCGTCCAAGTGCTACATTTAATGCAGCGCTTTCAACTGTTCAGGCTTAA
Upstream 100 bases:
>100_bases GAGAGCCGATACTCTCAGGGTTTTATTTAAGCATATCGGTTCGTAGGCACTGGGCCAAAAGCTCGGTCCTCAAAACTCAA TTCAACGGAAGGGGCTATAT
Downstream 100 bases:
>100_bases TTACTAATTCATTAGTACATAGCTAAAAGCCGGTGCATAAGCACCGGCTTTTTATTTTTATAAAATAAAAGTTATTAAAA AAAGCCCACTAACGTGAGCT
Product: isocitrate dehydrogenase, NADP-dependent
Products: NA
Alternate protein names: IDH; Oxalosuccinate decarboxylase [H]
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MAGEKSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEFADYLSEEQKVSDNLAELGRLTQDPDT NIIKLPNISASVAQLTACIKELQSKGYAIPDYPENPATEEEKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVKNYAKKH PHSMSEWKQWSQTHVSHMEEGDFYHGEKSMTLDRPRNVKMELITNSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEK QLDDCREAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMAGLYEKIETLPTSLREEIIED LHACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPAMIRAGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGN FDPKTMGTVPNVGLMAQKAEEYGSHDKTFEIPEAGIANITDFDTGEVLLTQNVEEGDIWRMCQVKDAPIRDWVKLAVTRA RNSGMPAIFWLDPYRPHENELIKKVQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLDTISVTGNILRDYLTDLFPIM ELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENHLRWDSLGEFLALAVSLEEMGIKENNARAKLLAKTLDEAT GKLLDNDKSPSRRTGELDNRGSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAELAQVQGKPADIGGYYA VDPAKVSAVMRPSATFNAALSTVQA
Sequences:
>Translated_745_residues MAGEKSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEFADYLSEEQKVSDNLAELGRLTQDPDT NIIKLPNISASVAQLTACIKELQSKGYAIPDYPENPATEEEKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVKNYAKKH PHSMSEWKQWSQTHVSHMEEGDFYHGEKSMTLDRPRNVKMELITNSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEK QLDDCREAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMAGLYEKIETLPTSLREEIIED LHACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPAMIRAGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGN FDPKTMGTVPNVGLMAQKAEEYGSHDKTFEIPEAGIANITDFDTGEVLLTQNVEEGDIWRMCQVKDAPIRDWVKLAVTRA RNSGMPAIFWLDPYRPHENELIKKVQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLDTISVTGNILRDYLTDLFPIM ELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENHLRWDSLGEFLALAVSLEEMGIKENNARAKLLAKTLDEAT GKLLDNDKSPSRRTGELDNRGSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAELAQVQGKPADIGGYYA VDPAKVSAVMRPSATFNAALSTVQA >Mature_744_residues AGEKSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEFADYLSEEQKVSDNLAELGRLTQDPDTN IIKLPNISASVAQLTACIKELQSKGYAIPDYPENPATEEEKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVKNYAKKHP HSMSEWKQWSQTHVSHMEEGDFYHGEKSMTLDRPRNVKMELITNSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEKQ LDDCREAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMAGLYEKIETLPTSLREEIIEDL HACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPAMIRAGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGNF DPKTMGTVPNVGLMAQKAEEYGSHDKTFEIPEAGIANITDFDTGEVLLTQNVEEGDIWRMCQVKDAPIRDWVKLAVTRAR NSGMPAIFWLDPYRPHENELIKKVQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLDTISVTGNILRDYLTDLFPIME LGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENHLRWDSLGEFLALAVSLEEMGIKENNARAKLLAKTLDEATG KLLDNDKSPSRRTGELDNRGSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAELAQVQGKPADIGGYYAV DPAKVSAVMRPSATFNAALSTVQA
Specific function: Unknown
COG id: COG2838
COG function: function code C; Monomeric isocitrate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monomeric-type IDH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001804 - InterPro: IPR004436 [H]
Pfam domain/function: PF03971 IDH [H]
EC number: =1.1.1.42 [H]
Molecular weight: Translated: 82674; Mature: 82543
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEKSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEFADYLSE CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHH EQKVSDNLAELGRLTQDPDTNIIKLPNISASVAQLTACIKELQSKGYAIPDYPENPATEE HHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVKNYAKKHPHSMSEWKQWSQTHVSHMEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC GDFYHGEKSMTLDRPRNVKMELITNSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEK CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHH QLDDCREAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMA HHHHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH GLYEKIETLPTSLREEIIEDLHACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPAMIR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHH AGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGNFDPKTMGTVPNVGLMAQKAE CCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH EYGSHDKTFEIPEAGIANITDFDTGEVLLTQNVEEGDIWRMCQVKDAPIRDWVKLAVTRA HHCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHH RNSGMPAIFWLDPYRPHENELIKKVQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLD CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCH TISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEEN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHC HLRWDSLGEFLALAVSLEEMGIKENNARAKLLAKTLDEATGKLLDNDKSPSRRTGELDNR CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAELAQVQGKPADIGGYYA CCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEE VDPAKVSAVMRPSATFNAALSTVQA ECHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure AGEKSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEFADYLSE CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHH EQKVSDNLAELGRLTQDPDTNIIKLPNISASVAQLTACIKELQSKGYAIPDYPENPATEE HHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVKNYAKKHPHSMSEWKQWSQTHVSHMEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC GDFYHGEKSMTLDRPRNVKMELITNSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEK CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHH QLDDCREAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMA HHHHHHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH GLYEKIETLPTSLREEIIEDLHACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPAMIR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHH AGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGNFDPKTMGTVPNVGLMAQKAE CCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH EYGSHDKTFEIPEAGIANITDFDTGEVLLTQNVEEGDIWRMCQVKDAPIRDWVKLAVTRA HHCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHH RNSGMPAIFWLDPYRPHENELIKKVQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLD CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCH TISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEEN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHC HLRWDSLGEFLALAVSLEEMGIKENNARAKLLAKTLDEATGKLLDNDKSPSRRTGELDNR CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAELAQVQGKPADIGGYYA CCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEE VDPAKVSAVMRPSATFNAALSTVQA ECHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12005040; 4149369; 12467571 [H]