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The map label for this gene is yjdF [H]

Identifier: 213158155

GI number: 213158155

Start: 2956767

End: 2957408

Strand: Direct

Name: yjdF [H]

Synonym: AB57_2869

Alternate gene names: 213158155

Gene position: 2956767-2957408 (Clockwise)

Preceding gene: 213158154

Following gene: 213158164

Centisome position: 73.0

GC content: 36.45

Gene sequence:

>642_bases
ATGATCGAAAAAGAATTCAAAGTTAAACACTATATTGCGCTTGGTCTGCTTTTTATTGCCATTATCATTTCAGGTATTCA
ACCACTTGAGTTTGAGGCTTATTTGCTTCATCAAGCTGGCACTGTTTTTATGGTGATTCTGCTTTTTATTATTTTCAAAA
AAATTGGACTCGATTTCTTAAGTTTTACTTTTTATCTACTGTTTTTATTAATCCATATTATTGGTGCTCACTATCTCTAC
TCCTACGTTCCATACAATGACTGGATACAACAGGTGTTCCATTTCAACCTAGATCAATATATGGGCTGGTCCCGCAATAT
GTATGATCGTTTAGTTCATCTTGCCTATGGTGTTTTGCTCTATCCTCTTATTTATCGTGTATTCCAAGTATGGTTACCCA
CTGCACGTCCTTTTTCTTTATTCTTACTTGTAGTCCAGTTTGTGATGGCGTCTAGTGTCTTTTATGAACTGATCGAATGG
GCAATTGCAATCGGGCTATCACCTGAACAAGCTGAAAATTATAATGGGCAACAAGGTGATATGTGGGATGCACATAAAGA
CATGTTACTCGCTACAATTGGCGCAATCCTCTATGGGCTAATCGCTCTTCTCACAACACCAAAAAATCAAACAATAAATT
AA

Upstream 100 bases:

>100_bases
TTAATTAGCAAAATCTAATTAAAAAAGTTATAAAAAGCGAAGCTTAGGCTTCGCTTTTTTATTACACTCATACAAATCAG
AATAAAGACTTATTTATAAA

Downstream 100 bases:

>100_bases
AATTAAAAAAGCGCTCCTTGAGCGCTTTTTACATGTTGTCTCAAATACCCTAAACAACTGGATAAGTTTGATCTAAAAGG
TTTTGTAAAACCGAAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIEKEFKVKHYIALGLLFIAIIISGIQPLEFEAYLLHQAGTVFMVILLFIIFKKIGLDFLSFTFYLLFLLIHIIGAHYLY
SYVPYNDWIQQVFHFNLDQYMGWSRNMYDRLVHLAYGVLLYPLIYRVFQVWLPTARPFSLFLLVVQFVMASSVFYELIEW
AIAIGLSPEQAENYNGQQGDMWDAHKDMLLATIGAILYGLIALLTTPKNQTIN

Sequences:

>Translated_213_residues
MIEKEFKVKHYIALGLLFIAIIISGIQPLEFEAYLLHQAGTVFMVILLFIIFKKIGLDFLSFTFYLLFLLIHIIGAHYLY
SYVPYNDWIQQVFHFNLDQYMGWSRNMYDRLVHLAYGVLLYPLIYRVFQVWLPTARPFSLFLLVVQFVMASSVFYELIEW
AIAIGLSPEQAENYNGQQGDMWDAHKDMLLATIGAILYGLIALLTTPKNQTIN
>Mature_213_residues
MIEKEFKVKHYIALGLLFIAIIISGIQPLEFEAYLLHQAGTVFMVILLFIIFKKIGLDFLSFTFYLLFLLIHIIGAHYLY
SYVPYNDWIQQVFHFNLDQYMGWSRNMYDRLVHLAYGVLLYPLIYRVFQVWLPTARPFSLFLLVVQFVMASSVFYELIEW
AIAIGLSPEQAENYNGQQGDMWDAHKDMLLATIGAILYGLIALLTTPKNQTIN

Specific function: Unknown

COG id: COG3647

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790562, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014509 [H]

Pfam domain/function: PF09997 DUF2238 [H]

EC number: NA

Molecular weight: Translated: 24807; Mature: 24807

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKEFKVKHYIALGLLFIAIIISGIQPLEFEAYLLHQAGTVFMVILLFIIFKKIGLDFL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SFTFYLLFLLIHIIGAHYLYSYVPYNDWIQQVFHFNLDQYMGWSRNMYDRLVHLAYGVLL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHH
YPLIYRVFQVWLPTARPFSLFLLVVQFVMASSVFYELIEWAIAIGLSPEQAENYNGQQGD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
MWDAHKDMLLATIGAILYGLIALLTTPKNQTIN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIEKEFKVKHYIALGLLFIAIIISGIQPLEFEAYLLHQAGTVFMVILLFIIFKKIGLDFL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SFTFYLLFLLIHIIGAHYLYSYVPYNDWIQQVFHFNLDQYMGWSRNMYDRLVHLAYGVLL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHH
YPLIYRVFQVWLPTARPFSLFLLVVQFVMASSVFYELIEWAIAIGLSPEQAENYNGQQGD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
MWDAHKDMLLATIGAILYGLIALLTTPKNQTIN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2656658 [H]