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The map label for this gene is rlpA [C]

Identifier: 213158039

GI number: 213158039

Start: 2815656

End: 2816273

Strand: Direct

Name: rlpA [C]

Synonym: AB57_2750

Alternate gene names: 213158039

Gene position: 2815656-2816273 (Clockwise)

Preceding gene: 213158038

Following gene: 213158040

Centisome position: 69.51

GC content: 41.59

Gene sequence:

>618_bases
ATGCAGTTATCGCTGAAATACATTCTTGCACTGACGGCTAGTTTAAGCATGGCCCCACTGCACGCTGAAATGATGCAATC
ATCATCATTAAATAGCGAGGTAGATGGTCCAAATGCAAATTTAGCTGCTCGTGTGTTGAGTAAAGATACTCAAAACTTTA
ATTCTCGTTTCTCTAACATTAACAGTCTTTCAATCACTGAACGTTCTGGCGATCAAATCCGTCGTCAAGCTATCGCAGCT
AAAATTGAAATCCCTGAAGATGAGCCTTCAGTGATTGAAAAACTTAACACAGTAGCTTCAAATACTGTTCGTAAGTTTAG
CCAAACTGGCATGGCATCGTGGTATGGTCGTCAATTTCATGGCCGTAAAACTGCAAGTGGTGAAACATTCGATATGAATG
CACTTACTGCTGCTCACCGTAGCTTACCGCTTAACTGTTATATCCGTGTCACCAACAAAGACAATGGCAAAAGCGTAGTG
GTAAAAGTAAACGATCGTGGTCCTTTCCATGGTAATCGTGTGCTTGATTTATCATACGGTGCAGCTAAACGCCTTGGTAT
TACCAATGCTGGTACTGCTAAAGTAAGTATTGAGCGTGTAGACGGTCCTACTTCATAA

Upstream 100 bases:

>100_bases
CCAATCAAGCAATTGCAAAAGTGAATAATTAGGCATGTTCACTTCAATTTTTAGCTCTTTGGCTAAATGAAAAAGTGCAT
GTTCTCAGGAGTTTATATAA

Downstream 100 bases:

>100_bases
GCGATTACTCCTCGAGTTCATGAAAAAGCCACAAGTTAAGTTGTGGCTTTTTTAATATAAAAAGAGCAAAAAAACCCTAT
AAAAATTTTGTGTCTAGACT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQLSLKYILALTASLSMAPLHAEMMQSSSLNSEVDGPNANLAARVLSKDTQNFNSRFSNINSLSITERSGDQIRRQAIAA
KIEIPEDEPSVIEKLNTVASNTVRKFSQTGMASWYGRQFHGRKTASGETFDMNALTAAHRSLPLNCYIRVTNKDNGKSVV
VKVNDRGPFHGNRVLDLSYGAAKRLGITNAGTAKVSIERVDGPTS

Sequences:

>Translated_205_residues
MQLSLKYILALTASLSMAPLHAEMMQSSSLNSEVDGPNANLAARVLSKDTQNFNSRFSNINSLSITERSGDQIRRQAIAA
KIEIPEDEPSVIEKLNTVASNTVRKFSQTGMASWYGRQFHGRKTASGETFDMNALTAAHRSLPLNCYIRVTNKDNGKSVV
VKVNDRGPFHGNRVLDLSYGAAKRLGITNAGTAKVSIERVDGPTS
>Mature_205_residues
MQLSLKYILALTASLSMAPLHAEMMQSSSLNSEVDGPNANLAARVLSKDTQNFNSRFSNINSLSITERSGDQIRRQAIAA
KIEIPEDEPSVIEKLNTVASNTVRKFSQTGMASWYGRQFHGRKTASGETFDMNALTAAHRSLPLNCYIRVTNKDNGKSVV
VKVNDRGPFHGNRVLDLSYGAAKRLGITNAGTAKVSIERVDGPTS

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=96, Percent_Identity=46.875, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 22313; Mature: 22313

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSLKYILALTASLSMAPLHAEMMQSSSLNSEVDGPNANLAARVLSKDTQNFNSRFSNI
CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
NSLSITERSGDQIRRQAIAAKIEIPEDEPSVIEKLNTVASNTVRKFSQTGMASWYGRQFH
CEEEEECCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHCC
GRKTASGETFDMNALTAAHRSLPLNCYIRVTNKDNGKSVVVKVNDRGPFHGNRVLDLSYG
CCCCCCCCEEECHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCC
AAKRLGITNAGTAKVSIERVDGPTS
CHHHCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MQLSLKYILALTASLSMAPLHAEMMQSSSLNSEVDGPNANLAARVLSKDTQNFNSRFSNI
CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
NSLSITERSGDQIRRQAIAAKIEIPEDEPSVIEKLNTVASNTVRKFSQTGMASWYGRQFH
CEEEEECCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHCC
GRKTASGETFDMNALTAAHRSLPLNCYIRVTNKDNGKSVVVKVNDRGPFHGNRVLDLSYG
CCCCCCCCEEECHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCC
AAKRLGITNAGTAKVSIERVDGPTS
CHHHCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]