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The map label for this gene is trpH [H]

Identifier: 213157930

GI number: 213157930

Start: 3533087

End: 3533938

Strand: Reverse

Name: trpH [H]

Synonym: AB57_3423

Alternate gene names: 213157930

Gene position: 3533938-3533087 (Counterclockwise)

Preceding gene: 213157934

Following gene: 213157927

Centisome position: 87.25

GC content: 39.67

Gene sequence:

>852_bases
ATGCAAGGCATAGATTTACATACACATAGCAATATTTCTGATGGAACTTTGTCTCCGGAATTGCTAGTGCAAGCTGCTGT
CGATGTGAAGTTGCATACTTTAGCGCTAACCGATCACGATACGATGGATGGATTACAGCGTGCAAGAAATGCTGCACAAC
CCCATGATTTGCAAATTATTTCTGGTGTGGAGATTTCAAGCCAGTGGTCACGACCAAGCACGAAAAAAAGCTATGGCGTG
CATATTGTGGCTTTAAATATGCAAGATGAAGCCCCAATTTTAGAAGCATTAGAACAACAAAAAAGAATTAGAGCACAAAG
AGCAGTAGTTATTTGTGAACTATTAAAAAAGTGTATTGGCTTTGATATTTATCAAGATGTTCTCGATAAAGTTGAAAATC
AACCAGACCGGATTACCAGAACCCATATTGCTAAAGCCTTAGTTGAAAAGAATGTAGTGAGCCGTCCTCAACAAGCTTTC
GATCGTTTTTTAAAGGAAGGGAAGCGTGCTTTTGTAAAGTTTGAAGGATTGGGTTTGAAAGAGACCATTGAGGTTATTCA
TAACAGTAAAGGATTTGCAGTTTTAGCTCATCCAACCCGTTATGATTTATCGGCTACAAATACCCGGTATTTGATTGAGA
TATTTGCAAGTTGTGGTGGAGATGCGGTGGAGTTGCCGCCTCCAGTAGATCCTTTATCTACTCGCCAAATGATTGATCGT
ATGCTTGAACAGCATCATTTGGCTATTTCAATTGGTAGCGATTTTCATGGTGAAAATATGCCGTGGATTAAATTAGGAAA
CACCCCTAAACCAACGAGTAACCAGCAAGGCATTTGGGAGCGTTTTATCTAA

Upstream 100 bases:

>100_bases
GTCTTATATAAATAAAAGAAAATAATTAATGGAACAAAGTCCAGTAGTGCTTTCATGTTAGAGTATCTGATCAGGTTTGG
TGAATGGCATAGTATAAAAG

Downstream 100 bases:

>100_bases
TCGCATTTTAGAGCAAGTTGTTATCTTGAGCTTGAATTGGAGGAGGTGTGGGCTTACCAAGTGTCCCCAAAAGCTCAATT
TCGATACTACGTACCATTGC

Product: PHP domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRARNAAQPHDLQIISGVEISSQWSRPSTKKSYGV
HIVALNMQDEAPILEALEQQKRIRAQRAVVICELLKKCIGFDIYQDVLDKVENQPDRITRTHIAKALVEKNVVSRPQQAF
DRFLKEGKRAFVKFEGLGLKETIEVIHNSKGFAVLAHPTRYDLSATNTRYLIEIFASCGGDAVELPPPVDPLSTRQMIDR
MLEQHHLAISIGSDFHGENMPWIKLGNTPKPTSNQQGIWERFI

Sequences:

>Translated_283_residues
MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRARNAAQPHDLQIISGVEISSQWSRPSTKKSYGV
HIVALNMQDEAPILEALEQQKRIRAQRAVVICELLKKCIGFDIYQDVLDKVENQPDRITRTHIAKALVEKNVVSRPQQAF
DRFLKEGKRAFVKFEGLGLKETIEVIHNSKGFAVLAHPTRYDLSATNTRYLIEIFASCGGDAVELPPPVDPLSTRQMIDR
MLEQHHLAISIGSDFHGENMPWIKLGNTPKPTSNQQGIWERFI
>Mature_283_residues
MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRARNAAQPHDLQIISGVEISSQWSRPSTKKSYGV
HIVALNMQDEAPILEALEQQKRIRAQRAVVICELLKKCIGFDIYQDVLDKVENQPDRITRTHIAKALVEKNVVSRPQQAF
DRFLKEGKRAFVKFEGLGLKETIEVIHNSKGFAVLAHPTRYDLSATNTRYLIEIFASCGGDAVELPPPVDPLSTRQMIDR
MLEQHHLAISIGSDFHGENMPWIKLGNTPKPTSNQQGIWERFI

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=283, Percent_Identity=37.8091872791519, Blast_Score=167, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31765; Mature: 31765

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRARNAAQPHDLQII
CCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEE
SGVEISSQWSRPSTKKSYGVHIVALNMQDEAPILEALEQQKRIRAQRAVVICELLKKCIG
ECCEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FDIYQDVLDKVENQPDRITRTHIAKALVEKNVVSRPQQAFDRFLKEGKRAFVKFEGLGLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHEEEEECCCCHH
ETIEVIHNSKGFAVLAHPTRYDLSATNTRYLIEIFASCGGDAVELPPPVDPLSTRQMIDR
HHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH
MLEQHHLAISIGSDFHGENMPWIKLGNTPKPTSNQQGIWERFI
HHHHCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRARNAAQPHDLQII
CCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEE
SGVEISSQWSRPSTKKSYGVHIVALNMQDEAPILEALEQQKRIRAQRAVVICELLKKCIG
ECCEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FDIYQDVLDKVENQPDRITRTHIAKALVEKNVVSRPQQAFDRFLKEGKRAFVKFEGLGLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHEEEEECCCCHH
ETIEVIHNSKGFAVLAHPTRYDLSATNTRYLIEIFASCGGDAVELPPPVDPLSTRQMIDR
HHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH
MLEQHHLAISIGSDFHGENMPWIKLGNTPKPTSNQQGIWERFI
HHHHCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]