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The map label for this gene is secF [H]

Identifier: 213157926

GI number: 213157926

Start: 3529002

End: 3529967

Strand: Direct

Name: secF [H]

Synonym: AB57_3418

Alternate gene names: 213157926

Gene position: 3529002-3529967 (Clockwise)

Preceding gene: 213157925

Following gene: 213157928

Centisome position: 87.12

GC content: 41.3

Gene sequence:

>966_bases
ATGATGACTAAAGTGACTCAACAGCCTTCAAAACAATATGGTCGTCCGGATGATGCAAAAATCATCCCGTTCATGAAGAT
TGCTAAACCTGCAGCAATCTTCTCGATCCTTATTACTTTAGCGAGCATTTTCTTTATTGCGACCAAAGGTCTTAACTTAG
GTTTGGATTTTACAGGTGGTGTTTCAGCTGAGCTTAACTATGCTCAGCCAGCAAATCAGGCAGAAGTTATTCAGGCTCTC
GACAAAGCTGGTTTTAAAGATGCTGTAGTACAAACTTTGGGTAGTAATAAAGACTTACTTGTTCGCATGCCAGTACAAGA
TATTAAGGTTGAAGATCTTAATAATGCGATTACCAAAGCTGTGCAATTGCCAAACAATGCAGCAGAAGTTCATAAAGTGG
ACTCTGTAGGTGGTCAGGTAGGTAACGAGCTTTATGTTCGTTCGGCTGGTGCTGTTGCACTTGCGCTGATTTTAATGTTG
ATCTATGTCACCATTCGCTTTGAGTTCAAACTCGCAATGGGTGCCGTGATTTCTTTATTCCATGACATCATCATCATTAT
TGGTGCATTTGCTTTATTCCAATGGCCATTTGACCTAACAGTTTTAGCTGCGGTACTTGCGGTGATTGGTTTCTCGCTTA
ACGATAACATCGTTGTTTCAGACCGTATCCGTGAAAATTTCCGTAAAATTCGCGGTGCAACTCCACGTGAAATCGTTGAT
ATTGCATTAACTGAGACTTTACGCCGTACCATCCATACCTCAATGACCTTATTGCTCGTAGTACTTGCAATGATGTTCTT
GGGTGGTGATGGTTTACACTGGTTCTCTGTTGCAATGTTTGTCGGTGTCTTTGTCGGTACTTACTCTTCGATTTATATCG
GTACAGCATTTGCCTTATGGCGTGGTCTTAACCGTCAAGACTTCATTGTTCAGGTCAAACCTGAATTTGAAGATGAAATC
CCTTGA

Upstream 100 bases:

>100_bases
TTTGCTCAATGTTTACTGCCATTACAGTAACGCGTGCGATTGTACAAATCATTTATGGTAAACGCCGTAACTTGAAAAAG
TTGAGCATTTAAGGAGATCT

Downstream 100 bases:

>100_bases
TTGTCTAAATGAGACTATAAAAAAAACCGCGATTTATTCGCGGTTTTTTTTATTTGGTTCAAAAATTATTTACGGCGTAA
TGCATCCGAAATAGCTTCAA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MMTKVTQQPSKQYGRPDDAKIIPFMKIAKPAAIFSILITLASIFFIATKGLNLGLDFTGGVSAELNYAQPANQAEVIQAL
DKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKAVQLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILML
IYVTIRFEFKLAMGAVISLFHDIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVD
IALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALWRGLNRQDFIVQVKPEFEDEI
P

Sequences:

>Translated_321_residues
MMTKVTQQPSKQYGRPDDAKIIPFMKIAKPAAIFSILITLASIFFIATKGLNLGLDFTGGVSAELNYAQPANQAEVIQAL
DKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKAVQLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILML
IYVTIRFEFKLAMGAVISLFHDIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVD
IALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALWRGLNRQDFIVQVKPEFEDEI
P
>Mature_321_residues
MMTKVTQQPSKQYGRPDDAKIIPFMKIAKPAAIFSILITLASIFFIATKGLNLGLDFTGGVSAELNYAQPANQAEVIQAL
DKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKAVQLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILML
IYVTIRFEFKLAMGAVISLFHDIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVD
IALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALWRGLNRQDFIVQVKPEFEDEI
P

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=312, Percent_Identity=42.9487179487179, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35222; Mature: 35222

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTKVTQQPSKQYGRPDDAKIIPFMKIAKPAAIFSILITLASIFFIATKGLNLGLDFTGG
CCCCCCCCHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VSAELNYAQPANQAEVIQALDKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKA
CCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHH
VQLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILMLIYVTIRFEFKLAMGAVISLF
HHCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHH
IALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLNRQDFIVQVKPEFEDEIP
HCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MMTKVTQQPSKQYGRPDDAKIIPFMKIAKPAAIFSILITLASIFFIATKGLNLGLDFTGG
CCCCCCCCHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VSAELNYAQPANQAEVIQALDKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKA
CCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHH
VQLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILMLIYVTIRFEFKLAMGAVISLF
HHCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHH
IALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLNRQDFIVQVKPEFEDEIP
HCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]