Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 213157924

GI number: 213157924

Start: 3526711

End: 3527040

Strand: Direct

Name: yajC [H]

Synonym: AB57_3416

Alternate gene names: 213157924

Gene position: 3526711-3527040 (Clockwise)

Preceding gene: 213157923

Following gene: 213157925

Centisome position: 87.07

GC content: 41.52

Gene sequence:

>330_bases
ATGAGCTTGTTCATTTCTACTGCACATGCAGCTCCAGCAGCAGCCCAAAGCCCTGGCCTTTTACCAAACATTTTGATGAT
TGTTGTATTCGTTGCAATCTTCTATTTCTTAATTTGGCGTCCTCAAGCAAAACGTGCAAAAGAACACCGTTCTTTAATCG
AAAGCTTGGGTGTTGGTAGCGAAGTTGTCTTTGCTGGCGGTTTAATGGGCAAAGTAACTAAACTTGAAGGTGACTATGCG
GTTGTTGAACTTAACCGTGGTGTAGAAGTAAAAATTCAGCGTGCCAGCGTAATTTCTGTATTACCAGAAGGCACTCTAAA
TAACCTTTAA

Upstream 100 bases:

>100_bases
AAGCGAGATTTGCGCTCAACCTCAAGACAAGGTAAATTGCAAAACGAATTAGGATTATGTCAGGTATCTGACTCATATTT
TTTAACTTTAGGAAATTAAA

Downstream 100 bases:

>100_bases
TCATAAAACAGTCGTGCTTTAGCACGGCTTTTTCATTTAAGAAGAAAGCGAATGCGTTACCCTGCATGGAAATATTTACT
GATTCTGGTTGTTCTGGTAG

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSLFISTAHAAPAAAQSPGLLPNILMIVVFVAIFYFLIWRPQAKRAKEHRSLIESLGVGSEVVFAGGLMGKVTKLEGDYA
VVELNRGVEVKIQRASVISVLPEGTLNNL

Sequences:

>Translated_109_residues
MSLFISTAHAAPAAAQSPGLLPNILMIVVFVAIFYFLIWRPQAKRAKEHRSLIESLGVGSEVVFAGGLMGKVTKLEGDYA
VVELNRGVEVKIQRASVISVLPEGTLNNL
>Mature_108_residues
SLFISTAHAAPAAAQSPGLLPNILMIVVFVAIFYFLIWRPQAKRAKEHRSLIESLGVGSEVVFAGGLMGKVTKLEGDYAV
VELNRGVEVKIQRASVISVLPEGTLNNL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=50, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11733; Mature: 11602

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFISTAHAAPAAAQSPGLLPNILMIVVFVAIFYFLIWRPQAKRAKEHRSLIESLGVGS
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
EVVFAGGLMGKVTKLEGDYAVVELNRGVEVKIQRASVISVLPEGTLNNL
CEEEECCCCCCEEECCCCEEEEEECCCEEEEEECCCEEECCCCCCCCCC
>Mature Secondary Structure 
SLFISTAHAAPAAAQSPGLLPNILMIVVFVAIFYFLIWRPQAKRAKEHRSLIESLGVGS
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
EVVFAGGLMGKVTKLEGDYAVVELNRGVEVKIQRASVISVLPEGTLNNL
CEEEECCCCCCEEECCCCEEEEEECCCEEEEEECCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]