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The map label for this gene is yaaJ [C]

Identifier: 213157811

GI number: 213157811

Start: 3393780

End: 3395120

Strand: Reverse

Name: yaaJ [C]

Synonym: AB57_3294

Alternate gene names: 213157811

Gene position: 3395120-3393780 (Counterclockwise)

Preceding gene: 213157812

Following gene: 213157810

Centisome position: 83.82

GC content: 41.39

Gene sequence:

>1341_bases
ATGTTCTTGCAAAGTATTCGTGTTATGAAAAGCAGCCGTACAGAAGGCGAAGATGAGCATGGCCTTACACCTTTCCAAGC
GTTTGTAACAGGTCTTGCGAGCCGTGTTGGGGTGGGTAACATTGCTGGTGTGGCAATTGCGATCGCAATTGGTGGCCCAG
GCGCCGTGTTCTGGATGTGGGTAACCGCTGTACTTGGTATGAGCTCTGCTTTTATCGAATCTACTCTTGCTCAACTTTTT
AAGGTGAGAGACAGTAATAGCAAGCAATTCCGCGGTGGTCCAGCCTACTATATTACTCAAGGTTTACGTAGTAAAACTTT
TGGTGTGATCTTCGCGTTAGCATTGATCTTTACTTATGGTTTTGTATTTAATTCAGTTCAAATCAATGCAATTGCTAATG
CATCTTCACATGCTTGGGGTTGGGATAAAGCTAATCTTATTGCGCATTTAGGTGGTGTTGATTTAGAAATTTCATGGGTT
GGTCTTGCTCTTGTTGTGATGGTTGCATTAGCAATATTTGGTGGTATTAAACGTATCGCTAAATTCGCAGAGATGTTTGT
TCCTTTAAAAGCAGGTCTTTATCTCTCTGTAGCGTTATATATTGCATTAAGCAACTATGCGATTTTGCCTGATGTTTTAA
AACTGATTGTGACTGAAGCTTTCCACTTTAATGCTGCGGCAGGTGGTTTCTTCGGTGCTGCCGTGTCAATGGCAATGATG
CAAGGGATTAAGCGCGGTTTGTTCTCAAACGAAGCGGGTATGGGGTCTGCACCAAATGCGGCGGCTGCGTCTGATGTAAA
ACATCCTGTAAACCAAGGTTTGGTACAAATGCTTGGCGTATTCGTAGATACATTCATTGTATGTACAAGTACAGCAATCA
TCATTTTAGTTTCTGGCGTTTACCAAGACGCTGGCTTCGTCGGTGTTGAATTAACCCAACGTGCACTAGAGACTCAAGTG
GGGCACTGGGGAGCTGACTTCTTAGCTGTTCTATTATTCTTGTTCTGTTACTCAGCTGTATTAGGTAACTATGCTTATGC
AGAAAGTAACGTACAGTTCATTAATAACAACCCGAAAGTCATGTTCATCTTCCGTATTTTTGTATTGGTGATGGTGTATT
TCGGTGCAATTGGTAGTGTGCCATTAGTATGGTCAATGGCAGACTTGTTTATGGGTATTATGGCTACCATTAACTTGGTC
GCAATTTTACTCTTAACCCCAATGGCTCGTACTTTGTTGAAAGATTACCGAGCGCAATTGAAGCAAGGTATTAAAGAACC
TGTATTTAAAATTAATAAATATCCAGAGTTGAAGAAAAAAGTCGATTCAGATATTTGGTAA

Upstream 100 bases:

>100_bases
GTACTAATTTTTTAATGAACCTTTATGGGATTTTCTGGTTATTTTCTTGCTGGCCGTCGGTATTTTTTATACGGTCTTAA
CAGGAGCAGTGCAAATTCGC

Downstream 100 bases:

>100_bases
TTTTGTAAGAAAAGCCTCTTAGAAATAAGGGGCTTTTTTTCGGCATAATAAAAATGCTTGAGTATAAAAATTAAACATGA
CAAATTAAATAAATTCACTA

Product: amino-acid transport protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MFLQSIRVMKSSRTEGEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMWVTAVLGMSSAFIESTLAQLF
KVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYGFVFNSVQINAIANASSHAWGWDKANLIAHLGGVDLEISWV
GLALVVMVALAIFGGIKRIAKFAEMFVPLKAGLYLSVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMM
QGIKRGLFSNEAGMGSAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGVYQDAGFVGVELTQRALETQV
GHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKVMFIFRIFVLVMVYFGAIGSVPLVWSMADLFMGIMATINLV
AILLLTPMARTLLKDYRAQLKQGIKEPVFKINKYPELKKKVDSDIW

Sequences:

>Translated_446_residues
MFLQSIRVMKSSRTEGEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMWVTAVLGMSSAFIESTLAQLF
KVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYGFVFNSVQINAIANASSHAWGWDKANLIAHLGGVDLEISWV
GLALVVMVALAIFGGIKRIAKFAEMFVPLKAGLYLSVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMM
QGIKRGLFSNEAGMGSAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGVYQDAGFVGVELTQRALETQV
GHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKVMFIFRIFVLVMVYFGAIGSVPLVWSMADLFMGIMATINLV
AILLLTPMARTLLKDYRAQLKQGIKEPVFKINKYPELKKKVDSDIW
>Mature_446_residues
MFLQSIRVMKSSRTEGEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMWVTAVLGMSSAFIESTLAQLF
KVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYGFVFNSVQINAIANASSHAWGWDKANLIAHLGGVDLEISWV
GLALVVMVALAIFGGIKRIAKFAEMFVPLKAGLYLSVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMM
QGIKRGLFSNEAGMGSAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGVYQDAGFVGVELTQRALETQV
GHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKVMFIFRIFVLVMVYFGAIGSVPLVWSMADLFMGIMATINLV
AILLLTPMARTLLKDYRAQLKQGIKEPVFKINKYPELKKKVDSDIW

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=432, Percent_Identity=43.9814814814815, Blast_Score=332, Evalue=3e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48218; Mature: 48218

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLQSIRVMKSSRTEGEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMW
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCHHHHHHH
VTAVLGMSSAFIESTLAQLFKVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYG
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFNSVQINAIANASSHAWGWDKANLIAHLGGVDLEISWVGLALVVMVALAIFGGIKRIA
HHHCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
KFAEMFVPLKAGLYLSVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QGIKRGLFSNEAGMGSAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGV
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQDAGFVGVELTQRALETQVGHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKV
HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCE
MFIFRIFVLVMVYFGAIGSVPLVWSMADLFMGIMATINLVAILLLTPMARTLLKDYRAQL
EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGIKEPVFKINKYPELKKKVDSDIW
HHHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MFLQSIRVMKSSRTEGEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMW
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCHHHHHHH
VTAVLGMSSAFIESTLAQLFKVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYG
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFNSVQINAIANASSHAWGWDKANLIAHLGGVDLEISWVGLALVVMVALAIFGGIKRIA
HHHCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
KFAEMFVPLKAGLYLSVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QGIKRGLFSNEAGMGSAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGV
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQDAGFVGVELTQRALETQVGHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKV
HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCE
MFIFRIFVLVMVYFGAIGSVPLVWSMADLFMGIMATINLVAILLLTPMARTLLKDYRAQL
EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGIKEPVFKINKYPELKKKVDSDIW
HHHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]