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The map label for this gene is qseB [H]

Identifier: 213157694

GI number: 213157694

Start: 3298410

End: 3299084

Strand: Reverse

Name: qseB [H]

Synonym: AB57_3173

Alternate gene names: 213157694

Gene position: 3299084-3298410 (Counterclockwise)

Preceding gene: 213157695

Following gene: 213157693

Centisome position: 81.45

GC content: 37.33

Gene sequence:

>675_bases
ATGACAAAAATCTTGATGATTGAAGATGATTTTATGATTGCAGAATCAACGATCACGTTGCTGCAATATCATCAGTTTGA
GGTGGAATGGGTCAATAACGGTTTAGATGGTTTGGCTCAATTGGCGAAGACTAAATTTGATCTTATTCTTTTGGATTTAG
GATTGCCTATGATGGATGGTATGCAAGTTTTGAAGCAGATCCGTCAAAGAGCAGCAACACCAGTATTAATTATTTCTGCT
CGAGATCAATTACAAAACCGTGTCGATGGTTTAAATTTGGGTGCAGATGATTATTTAATTAAACCTTATGAGTTTGATGA
GTTGCTTGCCCGTATTCATGCATTACTACGCCGTAGTGGAGTAGAAGCTCAACTTGCGAGTCAAGATCAACTATTAGAAA
GTGGCGATCTGGTTTTAAATGTTGAACAGCATATTGCGACGTTTAAAGGTCAACGCATTGATCTATCAAATCGTGAATGG
GCAATCTTAATTCCACTTATGACTCACCCAAATAAAATCTTTTCTAAAGCCAACTTAGAAGATAAGTTATATGATTTTGA
TAGTGATGTGACCAGTAATACTATTGAAGTATATGTTCACCATTTAAGAGCGAAGCTGGGTAAAGATTTTATCCGAACCA
TCCGAGGACTGGGCTACCGTTTGGGGCAATCATAA

Upstream 100 bases:

>100_bases
CAAGTTTGTTAAGTTTGCTGGATGTAAAAACTCAGGTCATCAACCCTCAACTGGACATGTTGCACTCTTGTGCCCATGTA
AACTAAAGCGAGCCTAGAAC

Downstream 100 bases:

>100_bases
TTTAAAATTTCGGGACTTCATAAAAGTGCATTATTCATTAAAAAAACGACTGATTTGGGGCACCTCAATTTTCAGTGTCA
TCTTAGGTTGTATTTTAATT

Product: two-component system DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTKILMIEDDFMIAESTITLLQYHQFEVEWVNNGLDGLAQLAKTKFDLILLDLGLPMMDGMQVLKQIRQRAATPVLIISA
RDQLQNRVDGLNLGADDYLIKPYEFDELLARIHALLRRSGVEAQLASQDQLLESGDLVLNVEQHIATFKGQRIDLSNREW
AILIPLMTHPNKIFSKANLEDKLYDFDSDVTSNTIEVYVHHLRAKLGKDFIRTIRGLGYRLGQS

Sequences:

>Translated_224_residues
MTKILMIEDDFMIAESTITLLQYHQFEVEWVNNGLDGLAQLAKTKFDLILLDLGLPMMDGMQVLKQIRQRAATPVLIISA
RDQLQNRVDGLNLGADDYLIKPYEFDELLARIHALLRRSGVEAQLASQDQLLESGDLVLNVEQHIATFKGQRIDLSNREW
AILIPLMTHPNKIFSKANLEDKLYDFDSDVTSNTIEVYVHHLRAKLGKDFIRTIRGLGYRLGQS
>Mature_223_residues
TKILMIEDDFMIAESTITLLQYHQFEVEWVNNGLDGLAQLAKTKFDLILLDLGLPMMDGMQVLKQIRQRAATPVLIISAR
DQLQNRVDGLNLGADDYLIKPYEFDELLARIHALLRRSGVEAQLASQDQLLESGDLVLNVEQHIATFKGQRIDLSNREWA
ILIPLMTHPNKIFSKANLEDKLYDFDSDVTSNTIEVYVHHLRAKLGKDFIRTIRGLGYRLGQS

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=43.9461883408072, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=38.6363636363636, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=35.2678571428571, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=35.7466063348416, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=33.6322869955157, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=31.858407079646, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=31.8777292576419, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=31.25, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=35.6828193832599, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=30.2222222222222, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=30.0884955752212, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=28.8288288288288, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=24.5614035087719, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=33.9449541284404, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=25.8620689655172, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=79, Percent_Identity=43.0379746835443, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25549; Mature: 25418

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKILMIEDDFMIAESTITLLQYHQFEVEWVNNGLDGLAQLAKTKFDLILLDLGLPMMDG
CCEEEEEECCCEEHHHHHHHHHHHHEEEEEHHCCHHHHHHHHHHHHHEEEEECCCCHHHH
MQVLKQIRQRAATPVLIISARDQLQNRVDGLNLGADDYLIKPYEFDELLARIHALLRRSG
HHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
VEAQLASQDQLLESGDLVLNVEQHIATFKGQRIDLSNREWAILIPLMTHPNKIFSKANLE
CCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCEEECCCCCEEEEEEEECCCHHHHHHCCCC
DKLYDFDSDVTSNTIEVYVHHLRAKLGKDFIRTIRGLGYRLGQS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKILMIEDDFMIAESTITLLQYHQFEVEWVNNGLDGLAQLAKTKFDLILLDLGLPMMDG
CEEEEEECCCEEHHHHHHHHHHHHEEEEEHHCCHHHHHHHHHHHHHEEEEECCCCHHHH
MQVLKQIRQRAATPVLIISARDQLQNRVDGLNLGADDYLIKPYEFDELLARIHALLRRSG
HHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
VEAQLASQDQLLESGDLVLNVEQHIATFKGQRIDLSNREWAILIPLMTHPNKIFSKANLE
CCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCEEECCCCCEEEEEEEECCCHHHHHHCCCC
DKLYDFDSDVTSNTIEVYVHHLRAKLGKDFIRTIRGLGYRLGQS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]