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The map label for this gene is gidB

Identifier: 213157111

GI number: 213157111

Start: 1882935

End: 1883567

Strand: Direct

Name: gidB

Synonym: AB57_1794

Alternate gene names: 213157111

Gene position: 1882935-1883567 (Clockwise)

Preceding gene: 213157110

Following gene: 213157112

Centisome position: 46.49

GC content: 37.12

Gene sequence:

>633_bases
ATGCATCCGTTTTTTCAAGAGTTACAACAGGGTAGTCAAAAATTAGGTTTATCGCTTAGCGATGAAGCTTTGACATTATT
GTTGAAGTATCAAGATGCTTTGGTACTTTGGAACAAAGCTTATAATCTAACAGCGATTCGTGATCCTAAAGAAATGTTAG
TAAAGCATTTGTTGGATAGCCTAAGTATTTTGAAAGATTTACCAGCAGGTCGTTTGCTCGATGTAGGTACAGGTGGTGGC
ATGCCGGGCATGATCATTGCTTTATGTCAGCCAGAACGCTCTTGTGTATTGCTTGATTCAAATGGTAAGAAAATTCGTTT
TTTGAAACAGTTTATTGCTGACCTTAAGCTTAAAAACGTAATAGCTGTGCAAACGCGTGTTGAAAATCAAGATACAATTG
ATGAACTTGGCCAATTTGATGTAATAACAAGTCGTGCATTTGCATCATTAACAGATTTTGTTGAGGCTGCACGTCCATAT
TTACATGAGCAGAGTATAATTGCCGCGATGAAAGGACTGATTCCAGTTGAAGAAATGGAAGAGCTTAAGCAGGAATTTTC
ATGTAAAGTGATTGAACTGCATGTACCGAGACTTGATGAACAACGTCATTTACTTTTACTTCAACGAATTTAA

Upstream 100 bases:

>100_bases
CTTCTACGATTAACTGCGTAATCGCTAATCGTTAACTAGTGTTCCACGATGCATAAATGGGTATACTTTGTTTTAAATTT
TACTTAGATGTTATCTGTTT

Downstream 100 bases:

>100_bases
ATAAAAAGTATTAGGGTTACCATGGCTCAAATTATTGCGATTGCAAACCAAAAGGGTGGTGTTGGTAAAACAACGACTGC
AGTAAATCTTGCAGCGTCAC

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MHPFFQELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRLLDVGTGGG
MPGMIIALCQPERSCVLLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPY
LHEQSIIAAMKGLIPVEEMEELKQEFSCKVIELHVPRLDEQRHLLLLQRI

Sequences:

>Translated_210_residues
MHPFFQELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRLLDVGTGGG
MPGMIIALCQPERSCVLLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPY
LHEQSIIAAMKGLIPVEEMEELKQEFSCKVIELHVPRLDEQRHLLLLQRI
>Mature_210_residues
MHPFFQELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRLLDVGTGGG
MPGMIIALCQPERSCVLLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPY
LHEQSIIAAMKGLIPVEEMEELKQEFSCKVIELHVPRLDEQRHLLLLQRI

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=194, Percent_Identity=44.3298969072165, Blast_Score=163, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_ACIB3 (B7H3N1)

Other databases:

- EMBL:   CP001172
- RefSeq:   YP_002325829.1
- ProteinModelPortal:   B7H3N1
- SMR:   B7H3N1
- GeneID:   7060061
- GenomeReviews:   CP001172_GR
- KEGG:   abb:ABBFA_001926
- HOGENOM:   HBG686577
- OMA:   YELLVEW
- ProtClustDB:   PRK00107
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: =2.1.1.170

Molecular weight: Translated: 23720; Mature: 23720

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPFFQELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCEEEECCHHHHHHHHHHHH
LSILKDLPAGRLLDVGTGGGMPGMIIALCQPERSCVLLDSNGKKIRFLKQFIADLKLKNV
HHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
IAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQSIIAAMKGLIPVEEME
HEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ELKQEFSCKVIELHVPRLDEQRHLLLLQRI
HHHHHHCCEEEEEECCCCCCCHHHHHEECC
>Mature Secondary Structure
MHPFFQELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCEEEECCHHHHHHHHHHHH
LSILKDLPAGRLLDVGTGGGMPGMIIALCQPERSCVLLDSNGKKIRFLKQFIADLKLKNV
HHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
IAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQSIIAAMKGLIPVEEME
HEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ELKQEFSCKVIELHVPRLDEQRHLLLLQRI
HHHHHHCCEEEEEECCCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA