| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225077
Identifier: 212225077
GI number: 212225077
Start: 1810744
End: 1811532
Strand: Reverse
Name: 212225077
Synonym: TON_1925
Alternate gene names: NA
Gene position: 1811532-1810744 (Counterclockwise)
Preceding gene: 212225080
Following gene: 212225074
Centisome position: 98.05
GC content: 53.61
Gene sequence:
>789_bases ATGTCACTGGAGGAGCTCTACCGCTACCTTCGTTGGAGAATGGATCCCGATGATGAGCTAGCAGTTGGGAGGTTCTGGGG GATAATGAAGGTTTTCGAGTTCATGGAGGGGCTCCTGCCAGAAGAGCCCAGAGTACTCGACCTCTGCGCCGGCACGGGGA TTGCTGGGGCCGCTGCTGCTAGAGCCACTAATGCCCCGCTGCTAACGGTTCTGGACGCAAGGAAGGAGGATCTTGAGAAG GCCAGGAAGTGGATCGAGATAGCTGGGATAAGTCCTGAGCTCAGACTCGTCACCGGGGATGTGAGGGAAGTTTCAAAGCT CGTAGGAGAGCACGACCTGGCCCTGCTCTGGGGACTCACAATGCCGCACTTTGACCCCTTCGATGTGATAAGAATATTCG CAAACGTGGCCCTGAGCCTGAACGAAGACGGAGTTTTCGTTATGGAGGAAACTGACAGGGTCTACGGAATCCTCTACCAA GTAGGTTACAAGGACTTCCTCGTTGAATCCAAAACGGAAGACTACACCTTGATTTCGGTTCACGAGGGCTACAACCTCAA GAGGGGCACCTTCAAGAGGACGTACTACAAGCTACCGGGCTTCGAGAAGATCACCGAAGAGGAGCATAGGCTCTGGGATC TCGCTTCCCAGCTGGCTATAGGGAGCATCTTTTTCAGGGAATGGAAGCTCATCACAAGAAACGAGCATGGGATCAACGGT GTTTCCCACCTGCTCTACTTCAGAAGGCCGAAGAAGAACACCGCTAGAGAGGTGCTCGCTGATTTTTGA
Upstream 100 bases:
>100_bases GCCATGGTCTTCACCTCTGTCAACCTATGTAAGTTGACAAAATATTTAAGTCTTTCGACGGATTTAAATAACTTCATGTA TTATTGGCTGTGGTGATACC
Downstream 100 bases:
>100_bases TCCTCTGTTTTTCATTCAGCGCTCAGCTTTGAACTTTATCTCGACTATCTGGTTCGTGTTCCCGTTCTTCACTACGAGGT AGCAGTTCTCACCCGGCACA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSLEELYRYLRWRMDPDDELAVGRFWGIMKVFEFMEGLLPEEPRVLDLCAGTGIAGAAAARATNAPLLTVLDARKEDLEK ARKWIEIAGISPELRLVTGDVREVSKLVGEHDLALLWGLTMPHFDPFDVIRIFANVALSLNEDGVFVMEETDRVYGILYQ VGYKDFLVESKTEDYTLISVHEGYNLKRGTFKRTYYKLPGFEKITEEEHRLWDLASQLAIGSIFFREWKLITRNEHGING VSHLLYFRRPKKNTAREVLADF
Sequences:
>Translated_262_residues MSLEELYRYLRWRMDPDDELAVGRFWGIMKVFEFMEGLLPEEPRVLDLCAGTGIAGAAAARATNAPLLTVLDARKEDLEK ARKWIEIAGISPELRLVTGDVREVSKLVGEHDLALLWGLTMPHFDPFDVIRIFANVALSLNEDGVFVMEETDRVYGILYQ VGYKDFLVESKTEDYTLISVHEGYNLKRGTFKRTYYKLPGFEKITEEEHRLWDLASQLAIGSIFFREWKLITRNEHGING VSHLLYFRRPKKNTAREVLADF >Mature_261_residues SLEELYRYLRWRMDPDDELAVGRFWGIMKVFEFMEGLLPEEPRVLDLCAGTGIAGAAAARATNAPLLTVLDARKEDLEKA RKWIEIAGISPELRLVTGDVREVSKLVGEHDLALLWGLTMPHFDPFDVIRIFANVALSLNEDGVFVMEETDRVYGILYQV GYKDFLVESKTEDYTLISVHEGYNLKRGTFKRTYYKLPGFEKITEEEHRLWDLASQLAIGSIFFREWKLITRNEHGINGV SHLLYFRRPKKNTAREVLADF
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30222; Mature: 30091
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEELYRYLRWRMDPDDELAVGRFWGIMKVFEFMEGLLPEEPRVLDLCAGTGIAGAAAA CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH RATNAPLLTVLDARKEDLEKARKWIEIAGISPELRLVTGDVREVSKLVGEHDLALLWGLT HCCCCCEEEEHHCCHHHHHHHHHHEECCCCCCCEEEEECCHHHHHHHHCCCCHHHEEECC MPHFDPFDVIRIFANVALSLNEDGVFVMEETDRVYGILYQVGYKDFLVESKTEDYTLISV CCCCCHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHHHCHHHHHCCCCCCCEEEEEE HEGYNLKRGTFKRTYYKLPGFEKITEEEHRLWDLASQLAIGSIFFREWKLITRNEHGING ECCCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCH VSHLLYFRRPKKNTAREVLADF HHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure SLEELYRYLRWRMDPDDELAVGRFWGIMKVFEFMEGLLPEEPRVLDLCAGTGIAGAAAA CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH RATNAPLLTVLDARKEDLEKARKWIEIAGISPELRLVTGDVREVSKLVGEHDLALLWGLT HCCCCCEEEEHHCCHHHHHHHHHHEECCCCCCCEEEEECCHHHHHHHHCCCCHHHEEECC MPHFDPFDVIRIFANVALSLNEDGVFVMEETDRVYGILYQVGYKDFLVESKTEDYTLISV CCCCCHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHHHHCHHHHHCCCCCCCEEEEEE HEGYNLKRGTFKRTYYKLPGFEKITEEEHRLWDLASQLAIGSIFFREWKLITRNEHGING ECCCCCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCH VSHLLYFRRPKKNTAREVLADF HHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA