Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212225080

Identifier: 212225080

GI number: 212225080

Start: 1812728

End: 1813219

Strand: Reverse

Name: 212225080

Synonym: TON_1928

Alternate gene names: NA

Gene position: 1813219-1812728 (Counterclockwise)

Preceding gene: 212225081

Following gene: 212225077

Centisome position: 98.14

GC content: 55.49

Gene sequence:

>492_bases
ATGGCCTGGCTGGCGGTAGTTATCGTCCTCGGCCTCGGCGGAACGGTTCTTATCGCCTACCTCGTGGCGAAGCGCGAGTA
CGAGCTTGAAGAGCTCTCGGAAGAAGTTCCAGAGAAACCCAGAAGGAGGATAGAACCTCCTAAAGTAAGGAAATGCGTGG
TCCTTCAGTCGGCCTTTGTCGGCATCTCCCTTGCGCTCCTCTTTACCGGGAAACTCCCAAGAGAAGCGGGAATCGCCGTC
ATCGTCTTCACCCAGCTCTTCCTCCTCGCGCTGACGGTCCTCTTCTCCCGGCCCCTCGTTTTCCAGCTGGCGCCGAATTT
CAAGGGGAAGATGGCACTCGGCTTCGCCAGGGCCTTAACCGTAGTTTCAGCTGTGATAACCCTCTGGCTTTTCCTAATTG
TCACAGGCTACGAACCGGGCCGATCGAAGCAATCTTTCTCACGTTCTTTTCCCTCAGTGCAGTGTTCTACGCCGTCTTTA
AGTCCATCGTAA

Upstream 100 bases:

>100_bases
CTTATCTCTCCAAGCAGGCAAGAGAAAAGCTAATCGCGTCTCAGGAATCGGAACCATTGCAACGGGAGTTCTCATAATAC
TCCTTTCGCCGTTTCTCCCG

Downstream 100 bases:

>100_bases
GCGCCTACGAGGAGGGGTACTATTAGCCCTCAATGACCTTCACAAGCTCCTCAAGGTCTTTTCTTTCAACCAGACCAACC
TCAACGGCATGCTCTAAGAT

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAWLAVVIVLGLGGTVLIAYLVAKREYELEELSEEVPEKPRRRIEPPKVRKCVVLQSAFVGISLALLFTGKLPREAGIAV
IVFTQLFLLALTVLFSRPLVFQLAPNFKGKMALGFARALTVVSAVITLWLFLIVTGYEPGRSKQSFSRSFPSVQCSTPSL
SPS

Sequences:

>Translated_163_residues
MAWLAVVIVLGLGGTVLIAYLVAKREYELEELSEEVPEKPRRRIEPPKVRKCVVLQSAFVGISLALLFTGKLPREAGIAV
IVFTQLFLLALTVLFSRPLVFQLAPNFKGKMALGFARALTVVSAVITLWLFLIVTGYEPGRSKQSFSRSFPSVQCSTPSL
SPS
>Mature_162_residues
AWLAVVIVLGLGGTVLIAYLVAKREYELEELSEEVPEKPRRRIEPPKVRKCVVLQSAFVGISLALLFTGKLPREAGIAVI
VFTQLFLLALTVLFSRPLVFQLAPNFKGKMALGFARALTVVSAVITLWLFLIVTGYEPGRSKQSFSRSFPSVQCSTPSLS
PS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17881; Mature: 17749

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWLAVVIVLGLGGTVLIAYLVAKREYELEELSEEVPEKPRRRIEPPKVRKCVVLQSAFV
CHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHH
GISLALLFTGKLPREAGIAVIVFTQLFLLALTVLFSRPLVFQLAPNFKGKMALGFARALT
HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
VVSAVITLWLFLIVTGYEPGRSKQSFSRSFPSVQCSTPSLSPS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure 
AWLAVVIVLGLGGTVLIAYLVAKREYELEELSEEVPEKPRRRIEPPKVRKCVVLQSAFV
HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHH
GISLALLFTGKLPREAGIAVIVFTQLFLLALTVLFSRPLVFQLAPNFKGKMALGFARALT
HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
VVSAVITLWLFLIVTGYEPGRSKQSFSRSFPSVQCSTPSLSPS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA