Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212225074

Identifier: 212225074

GI number: 212225074

Start: 1808834

End: 1808947

Strand: Reverse

Name: 212225074

Synonym: TON_1922

Alternate gene names: NA

Gene position: 1808947-1808834 (Counterclockwise)

Preceding gene: 212225077

Following gene: 212225073

Centisome position: 97.91

GC content: 55.26

Gene sequence:

>114_bases
ATGAAGAGGAGACCGAGGAAGTGGAAGAAGAAGGGAAGGATGAGGTGGAAGTGGATCAAGAAGAGGATCAGGCGCCTCAA
GAGGCAGCGCAGGAAGGAGCGCGGACTCATCTGA

Upstream 100 bases:

>100_bases
TCTTTTCGACCGTCCAAAGGGAGTTAACCTTTCCCCACGGAAAAGCTTAAAAAGGAGCCGCTGGAGCTAAGGGTGGAGTT
AGAGCTCAGGGGTGATGCTC

Downstream 100 bases:

>100_bases
CGCCCTTCCATTCATTTTCTATTGCTTCCTTTTTGGTGGTGCTATGAACTCTTTTGAAGCATTTAAAAGGCTCTCACTGG
AAATTGAAACTTCACGTGGA

Product: LSU ribosomal protein L41E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 37; Mature: 37

Protein sequence:

>37_residues
MKRRPRKWKKKGRMRWKWIKKRIRRLKRQRRKERGLI

Sequences:

>Translated_37_residues
MKRRPRKWKKKGRMRWKWIKKRIRRLKRQRRKERGLI
>Mature_37_residues
MKRRPRKWKKKGRMRWKWIKKRIRRLKRQRRKERGLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5029; Mature: 5029

Theoretical pI: Translated: 13.21; Mature: 13.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRPRKWKKKGRMRWKWIKKRIRRLKRQRRKERGLI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRRPRKWKKKGRMRWKWIKKRIRRLKRQRRKERGLI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA