| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225009
Identifier: 212225009
GI number: 212225009
Start: 1738401
End: 1739576
Strand: Reverse
Name: 212225009
Synonym: TON_1857
Alternate gene names: NA
Gene position: 1739576-1738401 (Counterclockwise)
Preceding gene: 212225010
Following gene: 212225008
Centisome position: 94.15
GC content: 42.35
Gene sequence:
>1176_bases ATGAAAGTGGCAATAATCTGCTTCGATTTCAAGGAGTCAAACCTCAGAAAGCAACCCTGGAGATATGTGTATGAAATTGC AAAGGGGCTTAAATCCAATGGACATGAAGTTTTCATAGTCACTAATTCGAACAATGAGACAGATATCGCCGGAATACGAG TTTTTGGTGTCGGCAAATTGTTCATTCCTCTAAAAGGAGAATCAAAAGAAGTCCTAGAGGTTTTAGACAGGGAAAATCCC GACAGGATAATCATGCTCTTAGGGCTGACAAGCTTCCTCAGAACTCACTTTGAGATCAAACAGCCAGTCATAGGCGTTCT CACAAGCCCAGTATACTCATTGGGGGAGCTGATAAGAAACGTCGGGATTAGAGACTCGATAGCTTATCGCAGATACACAG TCATTCACATCATAAACTCGCTTGTACCTAGCTTTCTCGTGAGAAAATGGTCGCAGAAATTTGAATATATAATCGTTCTG AGTCAACGTAACCGGGAGAGACTAATCAAAAAAGGAGTTCCAGCGGATAAGGTTATTGTAATACCTCCAGGAATAGATGA AGAGTTCCTAGAGCTTCCTGAACGAGAAACAATTGAGCGCATTAGGTCTGAAATCAGTCCAGATGGAGCTCCTGTCGTGA TGTACTACACTTCCCCGTTAACCTTAAGGGGAACGGATACGCTAGTTAGGGCTTTGCCCCATATTCTAAAAGAAAAAGAA GTTAAACTGTTGATTCTTTCCAGACCCGATTACAGGAGTGTCCTAAAAGAGGAACAGAAGCTCAGAAAGCTGGCAGAAAA GCTGAACGTGAGAAAAAATCTCGTGATAATTTCAAAACATCTGCCACTCGAGGACGTCAAAGCGTACGTAAGTTCGGCTG ATGTGGTGGTGCTTCCGTTTAAACTTGTGCTTTCTGATGTCCCGCTGAGTATATTAGAAGCAATGGCTCTAGGAAAAGTT GTCATCGGTACTGATGTTGATGGAATTCCAGAGATACTGAAAGACAAAGGACTCATAGTCAGGCCGAATAACCCCAAAGA GTTGGCCAACGCTGTGTTATTAGTATTGGAAGATAAGAAGCTAAAATATGAACTAGAAACGGCAGCCAAGGAATACGTTA ATCAGTGGAGAAGATGGAATGACGTTGTGGAGGAGTTTTTAAAGCTGATAGGGTGA
Upstream 100 bases:
>100_bases AAACGCAAGAAAAACCATCGAGAGAAAGTTCACCTGGGGCAAGATAGGCAGGAAATTTGAGAGAATTTACGAGTCAGCCA CTAGCTAAGGTGATAGAACT
Downstream 100 bases:
>100_bases GGGTCCATGGATCCGCCTAGGCTTATCTGCATTATTGGACCGGATGGCACAGGAAAAACAACCCAGGCTAAGATGTTAAT TGAAAAACTTCGCGAGATGG
Product: membrane-bound galactosyl-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKVAIICFDFKESNLRKQPWRYVYEIAKGLKSNGHEVFIVTNSNNETDIAGIRVFGVGKLFIPLKGESKEVLEVLDRENP DRIIMLLGLTSFLRTHFEIKQPVIGVLTSPVYSLGELIRNVGIRDSIAYRRYTVIHIINSLVPSFLVRKWSQKFEYIIVL SQRNRERLIKKGVPADKVIVIPPGIDEEFLELPERETIERIRSEISPDGAPVVMYYTSPLTLRGTDTLVRALPHILKEKE VKLLILSRPDYRSVLKEEQKLRKLAEKLNVRKNLVIISKHLPLEDVKAYVSSADVVVLPFKLVLSDVPLSILEAMALGKV VIGTDVDGIPEILKDKGLIVRPNNPKELANAVLLVLEDKKLKYELETAAKEYVNQWRRWNDVVEEFLKLIG
Sequences:
>Translated_391_residues MKVAIICFDFKESNLRKQPWRYVYEIAKGLKSNGHEVFIVTNSNNETDIAGIRVFGVGKLFIPLKGESKEVLEVLDRENP DRIIMLLGLTSFLRTHFEIKQPVIGVLTSPVYSLGELIRNVGIRDSIAYRRYTVIHIINSLVPSFLVRKWSQKFEYIIVL SQRNRERLIKKGVPADKVIVIPPGIDEEFLELPERETIERIRSEISPDGAPVVMYYTSPLTLRGTDTLVRALPHILKEKE VKLLILSRPDYRSVLKEEQKLRKLAEKLNVRKNLVIISKHLPLEDVKAYVSSADVVVLPFKLVLSDVPLSILEAMALGKV VIGTDVDGIPEILKDKGLIVRPNNPKELANAVLLVLEDKKLKYELETAAKEYVNQWRRWNDVVEEFLKLIG >Mature_391_residues MKVAIICFDFKESNLRKQPWRYVYEIAKGLKSNGHEVFIVTNSNNETDIAGIRVFGVGKLFIPLKGESKEVLEVLDRENP DRIIMLLGLTSFLRTHFEIKQPVIGVLTSPVYSLGELIRNVGIRDSIAYRRYTVIHIINSLVPSFLVRKWSQKFEYIIVL SQRNRERLIKKGVPADKVIVIPPGIDEEFLELPERETIERIRSEISPDGAPVVMYYTSPLTLRGTDTLVRALPHILKEKE VKLLILSRPDYRSVLKEEQKLRKLAEKLNVRKNLVIISKHLPLEDVKAYVSSADVVVLPFKLVLSDVPLSILEAMALGKV VIGTDVDGIPEILKDKGLIVRPNNPKELANAVLLVLEDKKLKYELETAAKEYVNQWRRWNDVVEEFLKLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 44662; Mature: 44662
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIICFDFKESNLRKQPWRYVYEIAKGLKSNGHEVFIVTNSNNETDIAGIRVFGVGKL CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECEE FIPLKGESKEVLEVLDRENPDRIIMLLGLTSFLRTHFEIKQPVIGVLTSPVYSLGELIRN EEEECCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VGIRDSIAYRRYTVIHIINSLVPSFLVRKWSQKFEYIIVLSQRNRERLIKKGVPADKVIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEEEE IPPGIDEEFLELPERETIERIRSEISPDGAPVVMYYTSPLTLRGTDTLVRALPHILKEKE ECCCCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCEEECCHHHHHHHHHHHHCCCC VKLLILSRPDYRSVLKEEQKLRKLAEKLNVRKNLVIISKHLPLEDVKAYVSSADVVVLPF EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEHH KLVLSDVPLSILEAMALGKVVIGTDVDGIPEILKDKGLIVRPNNPKELANAVLLVLEDKK HHHHHCCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEECCCCHHHHHHHEEEEEECCC LKYELETAAKEYVNQWRRWNDVVEEFLKLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKVAIICFDFKESNLRKQPWRYVYEIAKGLKSNGHEVFIVTNSNNETDIAGIRVFGVGKL CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECEE FIPLKGESKEVLEVLDRENPDRIIMLLGLTSFLRTHFEIKQPVIGVLTSPVYSLGELIRN EEEECCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VGIRDSIAYRRYTVIHIINSLVPSFLVRKWSQKFEYIIVLSQRNRERLIKKGVPADKVIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEEEE IPPGIDEEFLELPERETIERIRSEISPDGAPVVMYYTSPLTLRGTDTLVRALPHILKEKE ECCCCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCEEECCHHHHHHHHHHHHCCCC VKLLILSRPDYRSVLKEEQKLRKLAEKLNVRKNLVIISKHLPLEDVKAYVSSADVVVLPF EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEHH KLVLSDVPLSILEAMALGKVVIGTDVDGIPEILKDKGLIVRPNNPKELANAVLLVLEDKK HHHHHCCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEECCCCHHHHHHHEEEEEECCC LKYELETAAKEYVNQWRRWNDVVEEFLKLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]