The gene/protein map for NC_008380 is currently unavailable.
Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212224978

Identifier: 212224978

GI number: 212224978

Start: 1712287

End: 1712883

Strand: Reverse

Name: 212224978

Synonym: TON_1827

Alternate gene names: NA

Gene position: 1712883-1712287 (Counterclockwise)

Preceding gene: 212224979

Following gene: 212224971

Centisome position: 92.71

GC content: 55.28

Gene sequence:

>597_bases
ATGAGACGTAGAGAAGTTGTGCTGAGTGCGGCCCTTCTGCTGCTGGTTGCGCTCGCGGGGCTCTCCAGCTCCCTATTCAC
GGACATAGCCCTCTCTGAGAACAACGAGATCTCCTCCGGAAAGTTCGATATAGGAATAAGCAAAGACGGAGAGAGGTTCT
ACAACGGCCTCAAGCTCTTCGACTTCTCGGATTTAATGCCTGGCGACGAGAAAACCGTAACCTTTTACGTGAAAAACCGC
GGGGACCTCGAGGTTTCGAGGATTACTATGACCATTTACGTTAACGACCTGGAGGACGGTGCCCTCTCCCCCGCCGAGAA
GGAAGTCGACAACACCACAGAGAGAGGCGAACTGAGCGGCTACCTCGTGATAACGGGCCTCTCGGTACAGCACGGAGGCA
CAACCACCGACCTGACGGAGGTGGCGGGCAGAACACTGAGGGAACTTGACGGGAAGGAGATAGAGCTCTTCAAAGGCTCC
CTGGGAGAGGGTGAGGTGCTAAAGATCGTCATGAGGATAAGGTTCTCACCAGAAGCGGGCAACGAGTGCCAGACCGACAG
GGTGGAGGTGGACATGAAGATAAACGCAGAGCAGTGA

Upstream 100 bases:

>100_bases
GAAGGTGACCTCCTGAGCCCTATTTCTTACTATTTTGAGAGAAAATTTTATAAGTCCATCCCACGTAATCACTAGTTGAA
TACTATCGCTGGTGGTGGAA

Downstream 100 bases:

>100_bases
GCTTTTAAACTCTCCTCATCCTTCAACATTTATCCGTATAACAAAAATCAAACCAGAAATATGGAATAGAGAACTGCTAA
AATCTAAATCACTCCGTTAA

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLFDFSDLMPGDEKTVTFYVKNR
GDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSGYLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGS
LGEGEVLKIVMRIRFSPEAGNECQTDRVEVDMKINAEQ

Sequences:

>Translated_198_residues
MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLFDFSDLMPGDEKTVTFYVKNR
GDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSGYLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGS
LGEGEVLKIVMRIRFSPEAGNECQTDRVEVDMKINAEQ
>Mature_198_residues
MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLFDFSDLMPGDEKTVTFYVKNR
GDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSGYLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGS
LGEGEVLKIVMRIRFSPEAGNECQTDRVEVDMKINAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21776; Mature: 21776

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLF
CCHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCEEEEEECCCHHHHHCCEEEE
DFSDLMPGDEKTVTFYVKNRGDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSG
EHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCE
YLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGSLGEGEVLKIVMRIRFSPEAG
EEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEHEEECCCCC
NECQTDRVEVDMKINAEQ
CCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLF
CCHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCEEEEEECCCHHHHHCCEEEE
DFSDLMPGDEKTVTFYVKNRGDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSG
EHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCE
YLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGSLGEGEVLKIVMRIRFSPEAG
EEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEHEEECCCCC
NECQTDRVEVDMKINAEQ
CCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA