| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224978
Identifier: 212224978
GI number: 212224978
Start: 1712287
End: 1712883
Strand: Reverse
Name: 212224978
Synonym: TON_1827
Alternate gene names: NA
Gene position: 1712883-1712287 (Counterclockwise)
Preceding gene: 212224979
Following gene: 212224971
Centisome position: 92.71
GC content: 55.28
Gene sequence:
>597_bases ATGAGACGTAGAGAAGTTGTGCTGAGTGCGGCCCTTCTGCTGCTGGTTGCGCTCGCGGGGCTCTCCAGCTCCCTATTCAC GGACATAGCCCTCTCTGAGAACAACGAGATCTCCTCCGGAAAGTTCGATATAGGAATAAGCAAAGACGGAGAGAGGTTCT ACAACGGCCTCAAGCTCTTCGACTTCTCGGATTTAATGCCTGGCGACGAGAAAACCGTAACCTTTTACGTGAAAAACCGC GGGGACCTCGAGGTTTCGAGGATTACTATGACCATTTACGTTAACGACCTGGAGGACGGTGCCCTCTCCCCCGCCGAGAA GGAAGTCGACAACACCACAGAGAGAGGCGAACTGAGCGGCTACCTCGTGATAACGGGCCTCTCGGTACAGCACGGAGGCA CAACCACCGACCTGACGGAGGTGGCGGGCAGAACACTGAGGGAACTTGACGGGAAGGAGATAGAGCTCTTCAAAGGCTCC CTGGGAGAGGGTGAGGTGCTAAAGATCGTCATGAGGATAAGGTTCTCACCAGAAGCGGGCAACGAGTGCCAGACCGACAG GGTGGAGGTGGACATGAAGATAAACGCAGAGCAGTGA
Upstream 100 bases:
>100_bases GAAGGTGACCTCCTGAGCCCTATTTCTTACTATTTTGAGAGAAAATTTTATAAGTCCATCCCACGTAATCACTAGTTGAA TACTATCGCTGGTGGTGGAA
Downstream 100 bases:
>100_bases GCTTTTAAACTCTCCTCATCCTTCAACATTTATCCGTATAACAAAAATCAAACCAGAAATATGGAATAGAGAACTGCTAA AATCTAAATCACTCCGTTAA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLFDFSDLMPGDEKTVTFYVKNR GDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSGYLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGS LGEGEVLKIVMRIRFSPEAGNECQTDRVEVDMKINAEQ
Sequences:
>Translated_198_residues MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLFDFSDLMPGDEKTVTFYVKNR GDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSGYLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGS LGEGEVLKIVMRIRFSPEAGNECQTDRVEVDMKINAEQ >Mature_198_residues MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLFDFSDLMPGDEKTVTFYVKNR GDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSGYLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGS LGEGEVLKIVMRIRFSPEAGNECQTDRVEVDMKINAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21776; Mature: 21776
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLF CCHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCEEEEEECCCHHHHHCCEEEE DFSDLMPGDEKTVTFYVKNRGDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSG EHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCE YLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGSLGEGEVLKIVMRIRFSPEAG EEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEHEEECCCCC NECQTDRVEVDMKINAEQ CCCCCCEEEEEEEEECCC >Mature Secondary Structure MRRREVVLSAALLLLVALAGLSSSLFTDIALSENNEISSGKFDIGISKDGERFYNGLKLF CCHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCCCCCEEEEEECCCHHHHHCCEEEE DFSDLMPGDEKTVTFYVKNRGDLEVSRITMTIYVNDLEDGALSPAEKEVDNTTERGELSG EHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCE YLVITGLSVQHGGTTTDLTEVAGRTLRELDGKEIELFKGSLGEGEVLKIVMRIRFSPEAG EEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEEEEHEEECCCCC NECQTDRVEVDMKINAEQ CCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA