| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224971
Identifier: 212224971
GI number: 212224971
Start: 1696082
End: 1698436
Strand: Reverse
Name: 212224971
Synonym: TON_1820
Alternate gene names: NA
Gene position: 1698436-1696082 (Counterclockwise)
Preceding gene: 212224978
Following gene: 212224969
Centisome position: 91.93
GC content: 46.75
Gene sequence:
>2355_bases GTGAGAACAGTTACACTAGAATTCATTCTGAGCGTTATCAAAAACCTGCTTAAACCAAAGTATGCCCTCCCTATTTTAAC TAGCATCGCCATCGCTATTCGCTTAATACCCTTTAGATTAAGCTATCTTCTTGGCTATGACACATATTTTCATATGGCAT ACGTTAAGTATTCCCTTAAACTTGGGGAGTGGGTGAACTTTTTCCCGTACGCCAAAGCTCCTTGGGGCATGCTTGTAAAT AACTTTCATCCACTTGGCCTCTGGATGACCCCGGCTTATGTATACAGGATCTTATCGATTTTTGGAATCTCACTCTACGA TTCATTCAGGATAACACCTGTCATTTTTGGCGTTTTAACCATTATATTCGTGTATCTGTCTGTCTGGAAGCTGTATGGCA GAGAAGAAGCATTTTTAAGCGCGTTGTTTTTATCCATCTCCTTTGGACACGTCTTCCGTTCAATAGCTGGATATTATCGG GGGGACAACTATCTGCTTTTCTGGTACAGTCTCGCTCTCTTGGGAATTAGCCTTGCTCTCTCACGCCGGAATGAAGGAGA AAGCTGGAAAAAGAGGAGACTGCTACTCTATCTAGTACCAGCATTAGCATCAGGCCTGGCAAGTATATTTTGGAGTGCAT ATTACCTAATATTCGTGTTCCTCCTTGGAAACGCTATATTTCTATCCATAGGTGCACTGTTACTCCAGAAGTCTCGTATG TTAGTTGACTCAGTAGCCATCGTTGTATCTACTCTCTTCGGAGCCCTATTGGCGAATTTTCTTGGGGAGTACTTTTACTA TGGAATGTTTGGATGGAATCGTCCTCTAGGTATCGAAACTGCACAGAAGCTCGGATTTCACCTTGAGACCATTAAGGATG CTTTCTTACTGGCTTACATAAGATATGCAGTTCCACTAGCCCTTGCATTTATCGTGCTTTTGTTCATAATATCTAAAGTC ATACGAAGTAGGACGCATCGTGTCGGGATTATAGTTGTACTCCTCATATTGGCGTTAGTTTTGATGGTGAAGTACTACGG ATTCATAGAAGGCACTTTTTTAAGTTTTATAAAGCACTTCAGCGGGGAATCCATCACAGAAACGCGGCAACCGTCCCTCC GGGATGTGTGGATCTCCTACGGTTCAGTAATCATTGCAGCTTTGTTCTTTCTTTTACGACTCAGACCCTCAAAGATTGCC ATTGAAGACTTCGTTGTGCTCGGATTTGTGTTGCCAAGTATACCTATGATATACACTTGGACTAGATTCCTCTTTATAGG TTCCCCTGCGGTCGCCATACTCGGCGGAGTTGGGTTATGGAACCTTGTAAGGGAGATCCATAAGTTGAACATCCGCAGTC ATCCAGTTATAGCTGGTATTCTCATAGTCCTTGTCACTGTTCCCACCGCATGGGTAGGCGTACAGAACACACTCAACGTA AAACCATTTATGAATGCTGAATGGGAGAAAGCCCTAATCTATCTCAGCGAGCATTCCAACGGAAACGATATTGTTCTCAC CTGGTGGGATCAAGGATATTGGGTTACCTACTACTCCTGGAGAGCCCCAGTTACTCAAGGGGTTCCAAACGAGTTCGTAG CTAGGTATTACATGGGTCTGGCCAGCGAAGAGGAGCTTATGAATCTGGGCGTGGATTACATCATAGTATCATACGACACC GTTTTAAAGTTCCCGGCAGTGCTGGAGACGGCTGGAGTTCCTCCCAAGGACTACCCGATGGTGCCCATTCCACTCGTGGA GCAGGTTGGAGGAGCGTTCCTCTTCGAAAGAGAGGGGTACTCCATATCGGCCAGAACCAGGAGCAGCAGCTGGGAGGTAG TGGTAACGGTAGGGGGGAGCAGGTTCTCCCCCAGGAAAGCCTTCGTTGAAGACACTGCAGGGGTCAGGGAGGTGAACGTC ACAGGGATCCAGAAGGCAGATGCCTACGTGTACCTCAACCTGAACTACGGCTACGCGGTGCTGATGAACGGCAGGGCATT CAACACGACCCTCGCCAGGCTGATGTTCACGGAGAGGGCACCAAACTACCGCCTGGTTTACTCGGACAGAGGATACATAA AGATTTTCAGATTCGAACACCCCAACGTGGCGGTCCTCAGGGATGGGGACAAAATCGTGCTGAGGTTTACCAATGCCACG GGGACAGATCTGGTAATCGAAGGATTTTTAGACAACGGGACGAGAGTGTTCAGGAGATGCTACGATGTCAGTGGGATGAG TGAGTTCACGCTTCCTGAGCAGCTGAACGGAAGCGTTGTTGTGAGGTATTCACACGAGATTAAAGGGAGAGTCCTTGATA GGGGAGTTTTTAGGGTTAATACCCCCAGCCACTAG
Upstream 100 bases:
>100_bases TTTATGATGCCCCTATTTTTTAACATTAAACTTTGTGAAGATAGAGAATAACACAATGCTTTTAATATTCTCAGAAAAGG TACTGCTATGGGGGATTCAA
Downstream 100 bases:
>100_bases CCAGTGAAACAGACATCACCAAGAAATGCCCTGGTATTACCATCATTGCATACACAGTTGACTGGTAATCGTTTACCAGT ATCAGGACTCCATACCCCGA
Product: oligosaccharyl transferase, STT3 subunit
Products: NA
Alternate protein names: Transmembrane Oligosaccharyl Transferase; Oligosaccharyl Transferase STT3 Subunit Superfamily; Oligosaccharyl Transferase Stt3 Subunit Related Protein; Protein-Export Membrane Protein; Oligosaccharyl Transferase-Like Protein
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MRTVTLEFILSVIKNLLKPKYALPILTSIAIAIRLIPFRLSYLLGYDTYFHMAYVKYSLKLGEWVNFFPYAKAPWGMLVN NFHPLGLWMTPAYVYRILSIFGISLYDSFRITPVIFGVLTIIFVYLSVWKLYGREEAFLSALFLSISFGHVFRSIAGYYR GDNYLLFWYSLALLGISLALSRRNEGESWKKRRLLLYLVPALASGLASIFWSAYYLIFVFLLGNAIFLSIGALLLQKSRM LVDSVAIVVSTLFGALLANFLGEYFYYGMFGWNRPLGIETAQKLGFHLETIKDAFLLAYIRYAVPLALAFIVLLFIISKV IRSRTHRVGIIVVLLILALVLMVKYYGFIEGTFLSFIKHFSGESITETRQPSLRDVWISYGSVIIAALFFLLRLRPSKIA IEDFVVLGFVLPSIPMIYTWTRFLFIGSPAVAILGGVGLWNLVREIHKLNIRSHPVIAGILIVLVTVPTAWVGVQNTLNV KPFMNAEWEKALIYLSEHSNGNDIVLTWWDQGYWVTYYSWRAPVTQGVPNEFVARYYMGLASEEELMNLGVDYIIVSYDT VLKFPAVLETAGVPPKDYPMVPIPLVEQVGGAFLFEREGYSISARTRSSSWEVVVTVGGSRFSPRKAFVEDTAGVREVNV TGIQKADAYVYLNLNYGYAVLMNGRAFNTTLARLMFTERAPNYRLVYSDRGYIKIFRFEHPNVAVLRDGDKIVLRFTNAT GTDLVIEGFLDNGTRVFRRCYDVSGMSEFTLPEQLNGSVVVRYSHEIKGRVLDRGVFRVNTPSH
Sequences:
>Translated_784_residues MRTVTLEFILSVIKNLLKPKYALPILTSIAIAIRLIPFRLSYLLGYDTYFHMAYVKYSLKLGEWVNFFPYAKAPWGMLVN NFHPLGLWMTPAYVYRILSIFGISLYDSFRITPVIFGVLTIIFVYLSVWKLYGREEAFLSALFLSISFGHVFRSIAGYYR GDNYLLFWYSLALLGISLALSRRNEGESWKKRRLLLYLVPALASGLASIFWSAYYLIFVFLLGNAIFLSIGALLLQKSRM LVDSVAIVVSTLFGALLANFLGEYFYYGMFGWNRPLGIETAQKLGFHLETIKDAFLLAYIRYAVPLALAFIVLLFIISKV IRSRTHRVGIIVVLLILALVLMVKYYGFIEGTFLSFIKHFSGESITETRQPSLRDVWISYGSVIIAALFFLLRLRPSKIA IEDFVVLGFVLPSIPMIYTWTRFLFIGSPAVAILGGVGLWNLVREIHKLNIRSHPVIAGILIVLVTVPTAWVGVQNTLNV KPFMNAEWEKALIYLSEHSNGNDIVLTWWDQGYWVTYYSWRAPVTQGVPNEFVARYYMGLASEEELMNLGVDYIIVSYDT VLKFPAVLETAGVPPKDYPMVPIPLVEQVGGAFLFEREGYSISARTRSSSWEVVVTVGGSRFSPRKAFVEDTAGVREVNV TGIQKADAYVYLNLNYGYAVLMNGRAFNTTLARLMFTERAPNYRLVYSDRGYIKIFRFEHPNVAVLRDGDKIVLRFTNAT GTDLVIEGFLDNGTRVFRRCYDVSGMSEFTLPEQLNGSVVVRYSHEIKGRVLDRGVFRVNTPSH >Mature_784_residues MRTVTLEFILSVIKNLLKPKYALPILTSIAIAIRLIPFRLSYLLGYDTYFHMAYVKYSLKLGEWVNFFPYAKAPWGMLVN NFHPLGLWMTPAYVYRILSIFGISLYDSFRITPVIFGVLTIIFVYLSVWKLYGREEAFLSALFLSISFGHVFRSIAGYYR GDNYLLFWYSLALLGISLALSRRNEGESWKKRRLLLYLVPALASGLASIFWSAYYLIFVFLLGNAIFLSIGALLLQKSRM LVDSVAIVVSTLFGALLANFLGEYFYYGMFGWNRPLGIETAQKLGFHLETIKDAFLLAYIRYAVPLALAFIVLLFIISKV IRSRTHRVGIIVVLLILALVLMVKYYGFIEGTFLSFIKHFSGESITETRQPSLRDVWISYGSVIIAALFFLLRLRPSKIA IEDFVVLGFVLPSIPMIYTWTRFLFIGSPAVAILGGVGLWNLVREIHKLNIRSHPVIAGILIVLVTVPTAWVGVQNTLNV KPFMNAEWEKALIYLSEHSNGNDIVLTWWDQGYWVTYYSWRAPVTQGVPNEFVARYYMGLASEEELMNLGVDYIIVSYDT VLKFPAVLETAGVPPKDYPMVPIPLVEQVGGAFLFEREGYSISARTRSSSWEVVVTVGGSRFSPRKAFVEDTAGVREVNV TGIQKADAYVYLNLNYGYAVLMNGRAFNTTLARLMFTERAPNYRLVYSDRGYIKIFRFEHPNVAVLRDGDKIVLRFTNAT GTDLVIEGFLDNGTRVFRRCYDVSGMSEFTLPEQLNGSVVVRYSHEIKGRVLDRGVFRVNTPSH
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89076; Mature: 89076
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVTLEFILSVIKNLLKPKYALPILTSIAIAIRLIPFRLSYLLGYDTYFHMAYVKYSLK CCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEWVNFFPYAKAPWGMLVNNFHPLGLWMTPAYVYRILSIFGISLYDSFRITPVIFGVLT HCCHHCCCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IIFVYLSVWKLYGREEAFLSALFLSISFGHVFRSIAGYYRGDNYLLFWYSLALLGISLAL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH SRRNEGESWKKRRLLLYLVPALASGLASIFWSAYYLIFVFLLGNAIFLSIGALLLQKSRM HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVDSVAIVVSTLFGALLANFLGEYFYYGMFGWNRPLGIETAQKLGFHLETIKDAFLLAYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH RYAVPLALAFIVLLFIISKVIRSRTHRVGIIVVLLILALVLMVKYYGFIEGTFLSFIKHF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGESITETRQPSLRDVWISYGSVIIAALFFLLRLRPSKIAIEDFVVLGFVLPSIPMIYTW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHH TRFLFIGSPAVAILGGVGLWNLVREIHKLNIRSHPVIAGILIVLVTVPTAWVGVQNTLNV HHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCC KPFMNAEWEKALIYLSEHSNGNDIVLTWWDQGYWVTYYSWRAPVTQGVPNEFVARYYMGL CCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCC ASEEELMNLGVDYIIVSYDTVLKFPAVLETAGVPPKDYPMVPIPLVEQVGGAFLFEREGY CCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEEECCC SISARTRSSSWEVVVTVGGSRFSPRKAFVEDTAGVREVNVTGIQKADAYVYLNLNYGYAV EEEEECCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEECCEEECCEEEEEEECCCEEE LMNGRAFNTTLARLMFTERAPNYRLVYSDRGYIKIFRFEHPNVAVLRDGDKIVLRFTNAT EECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCEEEEEEECCC GTDLVIEGFLDNGTRVFRRCYDVSGMSEFTLPEQLNGSVVVRYSHEIKGRVLDRGVFRVN CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCCCEECCCEEEEC TPSH CCCC >Mature Secondary Structure MRTVTLEFILSVIKNLLKPKYALPILTSIAIAIRLIPFRLSYLLGYDTYFHMAYVKYSLK CCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEWVNFFPYAKAPWGMLVNNFHPLGLWMTPAYVYRILSIFGISLYDSFRITPVIFGVLT HCCHHCCCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IIFVYLSVWKLYGREEAFLSALFLSISFGHVFRSIAGYYRGDNYLLFWYSLALLGISLAL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH SRRNEGESWKKRRLLLYLVPALASGLASIFWSAYYLIFVFLLGNAIFLSIGALLLQKSRM HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVDSVAIVVSTLFGALLANFLGEYFYYGMFGWNRPLGIETAQKLGFHLETIKDAFLLAYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH RYAVPLALAFIVLLFIISKVIRSRTHRVGIIVVLLILALVLMVKYYGFIEGTFLSFIKHF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGESITETRQPSLRDVWISYGSVIIAALFFLLRLRPSKIAIEDFVVLGFVLPSIPMIYTW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHH TRFLFIGSPAVAILGGVGLWNLVREIHKLNIRSHPVIAGILIVLVTVPTAWVGVQNTLNV HHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCC KPFMNAEWEKALIYLSEHSNGNDIVLTWWDQGYWVTYYSWRAPVTQGVPNEFVARYYMGL CCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCC ASEEELMNLGVDYIIVSYDTVLKFPAVLETAGVPPKDYPMVPIPLVEQVGGAFLFEREGY CCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEEEECCC SISARTRSSSWEVVVTVGGSRFSPRKAFVEDTAGVREVNVTGIQKADAYVYLNLNYGYAV EEEEECCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEECCEEECCEEEEEEECCCEEE LMNGRAFNTTLARLMFTERAPNYRLVYSDRGYIKIFRFEHPNVAVLRDGDKIVLRFTNAT EECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCEEEEEEECCC GTDLVIEGFLDNGTRVFRRCYDVSGMSEFTLPEQLNGSVVVRYSHEIKGRVLDRGVFRVN CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCCCEECCCEEEEC TPSH CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA