| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is malE [H]
Identifier: 212224946
GI number: 212224946
Start: 1664644
End: 1665963
Strand: Reverse
Name: malE [H]
Synonym: TON_1795
Alternate gene names: 212224946
Gene position: 1665963-1664644 (Counterclockwise)
Preceding gene: 212224947
Following gene: 212224945
Centisome position: 90.17
GC content: 55.83
Gene sequence:
>1320_bases ATGAAGAAAGGACTGTTTACCCTACTTTTGATTGGAGTTTTGATTTTTAGCGTCGTGGCCAGCGGCTGTATAGGCGGCGG TGAAACTACCAGCCCCACCACCACTCAGCCAACAACCACCCCGAGCGAGACCACAACGACTACCAGCCCAACAGAAACAA CTACCACTCCAGAGATCGAGTGCGGCAGCGGAAAAATAGTCATATGGCACGCCATGCAACCGAACGAGCTCGAGGTCTTC CAGAGCCTCGCAGAGGAGTACATGGCCATGTGCCCGAACGTTGAGATAGTCTTCGAGCAGAAGCCGGATCTTGAGAGTGC CCTCAAAGCCGCAATTCCGACCGGCCAGGGTCCGGACCTCTTCATATGGGCCCACGACTGGATTGGAAAGTTCGCCGATG CTGGCCTTCTCGAGCCGATTGACGACTACGTTACCGACGACATTCTGAACCAGTTCGCCCCGATGGCTCAGGATGCTATG CAGTACAAGGGTCACTTCTACGCCATGCCCTTCGCTGCCGAGACCGTTGCAATCATCTACAACAAGGATATGGTAAGCGA GCCGCCCAAGACCTTCGACGAGATGAAGGCGATAATGGAGCAGTACTACGACCCGGACAACGATAAGTACGGCATAGCCT ACCCAGTTAACGCTTACTTCATCTCTGCCTGGGCTCAGGCCTTTGGAGGCTACTACTTCAACGACCAGACCGAGATGCCC GGTCTCGACCAGCCTGAGACCATAGAGGGCTTCGAGTTCTTCTTCCAGAACGTCTGGCCATACATGGCCCCAACCGCTGA CTACAACACCCAGCAGAGCATCTTCCTCGAGGGCCGTGCTCCGATGATGGTCAACGGTCCGTGGAGCATTGCCAGCGTCA AGGACGCTGGAATCAACTTCGGCATCGTCCCGCTCCCGCCGATAATCAAGGACGGTAAGGAGTACTGGCCGAGACCCTAT GGTGGAGTCAAGAACATCTACTTCGCCAAGGGCATAAATAACAAAGAGACCGCCTGGTACTTCGTCAAGTGGTTCACCAC CAATCCAGAGGCCATAAAGGAGCTCTCCCTCCAGCTCGGATACATCCCGGTCCTTTCACCGGTTCTTGAGGACCCAGAAA TCCAAGCTGACCCCGTTATCTACGGCTTCGGTCAGGCAGTCCAGCACGCATACCTCATGCCAAAGAGCCCGAAGATGGGC GCCGTTTGGGGCGGTGTTGACGGAGCCATCAACGAGATACTCCAGGACCCGGCCACCGCTGACATACCCGCCATACTCCA GAAGTACCAGCAGGAGATCCTGAACAACCTCGGGGGCTGA
Upstream 100 bases:
>100_bases GGGTTGTACACACAATGCAAACTTGAACAGGGAAGCGCAAGGTATATATATCACTGACGATGATACTATAACACCCAAAG CGAATACGGGTGATAAAGCT
Downstream 100 bases:
>100_bases AGCCCTTTCCCTTTTCCTACCTTTTTGGAGGGATTGGGATGAAGAAGATCACCACAATTGCTCTGTTCCTCATTCTTCCA GGGATGGCGGCGTTTCTGCT
Product: ABC-type maltodextrin transport system
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKKGLFTLLLIGVLIFSVVASGCIGGGETTSPTTTQPTTTPSETTTTTSPTETTTTPEIECGSGKIVIWHAMQPNELEVF QSLAEEYMAMCPNVEIVFEQKPDLESALKAAIPTGQGPDLFIWAHDWIGKFADAGLLEPIDDYVTDDILNQFAPMAQDAM QYKGHFYAMPFAAETVAIIYNKDMVSEPPKTFDEMKAIMEQYYDPDNDKYGIAYPVNAYFISAWAQAFGGYYFNDQTEMP GLDQPETIEGFEFFFQNVWPYMAPTADYNTQQSIFLEGRAPMMVNGPWSIASVKDAGINFGIVPLPPIIKDGKEYWPRPY GGVKNIYFAKGINNKETAWYFVKWFTTNPEAIKELSLQLGYIPVLSPVLEDPEIQADPVIYGFGQAVQHAYLMPKSPKMG AVWGGVDGAINEILQDPATADIPAILQKYQQEILNNLGG
Sequences:
>Translated_439_residues MKKGLFTLLLIGVLIFSVVASGCIGGGETTSPTTTQPTTTPSETTTTTSPTETTTTPEIECGSGKIVIWHAMQPNELEVF QSLAEEYMAMCPNVEIVFEQKPDLESALKAAIPTGQGPDLFIWAHDWIGKFADAGLLEPIDDYVTDDILNQFAPMAQDAM QYKGHFYAMPFAAETVAIIYNKDMVSEPPKTFDEMKAIMEQYYDPDNDKYGIAYPVNAYFISAWAQAFGGYYFNDQTEMP GLDQPETIEGFEFFFQNVWPYMAPTADYNTQQSIFLEGRAPMMVNGPWSIASVKDAGINFGIVPLPPIIKDGKEYWPRPY GGVKNIYFAKGINNKETAWYFVKWFTTNPEAIKELSLQLGYIPVLSPVLEDPEIQADPVIYGFGQAVQHAYLMPKSPKMG AVWGGVDGAINEILQDPATADIPAILQKYQQEILNNLGG >Mature_439_residues MKKGLFTLLLIGVLIFSVVASGCIGGGETTSPTTTQPTTTPSETTTTTSPTETTTTPEIECGSGKIVIWHAMQPNELEVF QSLAEEYMAMCPNVEIVFEQKPDLESALKAAIPTGQGPDLFIWAHDWIGKFADAGLLEPIDDYVTDDILNQFAPMAQDAM QYKGHFYAMPFAAETVAIIYNKDMVSEPPKTFDEMKAIMEQYYDPDNDKYGIAYPVNAYFISAWAQAFGGYYFNDQTEMP GLDQPETIEGFEFFFQNVWPYMAPTADYNTQQSIFLEGRAPMMVNGPWSIASVKDAGINFGIVPLPPIIKDGKEYWPRPY GGVKNIYFAKGINNKETAWYFVKWFTTNPEAIKELSLQLGYIPVLSPVLEDPEIQADPVIYGFGQAVQHAYLMPKSPKMG AVWGGVDGAINEILQDPATADIPAILQKYQQEILNNLGG
Specific function: Involved in an abc transport system for maltotriose [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=363, Percent_Identity=28.9256198347107, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 48654; Mature: 48654
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLFTLLLIGVLIFSVVASGCIGGGETTSPTTTQPTTTPSETTTTTSPTETTTTPEIE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE CGSGKIVIWHAMQPNELEVFQSLAEEYMAMCPNVEIVFEQKPDLESALKAAIPTGQGPDL CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEE FIWAHDWIGKFADAGLLEPIDDYVTDDILNQFAPMAQDAMQYKGHFYAMPFAAETVAIIY EEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEE NKDMVSEPPKTFDEMKAIMEQYYDPDNDKYGIAYPVNAYFISAWAQAFGGYYFNDQTEMP CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCEEECCCCCCC GLDQPETIEGFEFFFQNVWPYMAPTADYNTQQSIFLEGRAPMMVNGPWSIASVKDAGINF CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCC GIVPLPPIIKDGKEYWPRPYGGVKNIYFAKGINNKETAWYFVKWFTTNPEAIKELSLQLG CCCCCCHHHHCCHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCHHHHHHHHHHCC YIPVLSPVLEDPEIQADPVIYGFGQAVQHAYLMPKSPKMGAVWGGVDGAINEILQDPATA CHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCC DIPAILQKYQQEILNNLGG CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKGLFTLLLIGVLIFSVVASGCIGGGETTSPTTTQPTTTPSETTTTTSPTETTTTPEIE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE CGSGKIVIWHAMQPNELEVFQSLAEEYMAMCPNVEIVFEQKPDLESALKAAIPTGQGPDL CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEE FIWAHDWIGKFADAGLLEPIDDYVTDDILNQFAPMAQDAMQYKGHFYAMPFAAETVAIIY EEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEE NKDMVSEPPKTFDEMKAIMEQYYDPDNDKYGIAYPVNAYFISAWAQAFGGYYFNDQTEMP CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHCCEEECCCCCCC GLDQPETIEGFEFFFQNVWPYMAPTADYNTQQSIFLEGRAPMMVNGPWSIASVKDAGINF CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEECCCCCCC GIVPLPPIIKDGKEYWPRPYGGVKNIYFAKGINNKETAWYFVKWFTTNPEAIKELSLQLG CCCCCCHHHHCCHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCHHHHHHHHHHCC YIPVLSPVLEDPEIQADPVIYGFGQAVQHAYLMPKSPKMGAVWGGVDGAINEILQDPATA CHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCC DIPAILQKYQQEILNNLGG CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]