Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is malC [H]

Identifier: 212224945

GI number: 212224945

Start: 1663706

End: 1664605

Strand: Reverse

Name: malC [H]

Synonym: TON_1794

Alternate gene names: 212224945

Gene position: 1664605-1663706 (Counterclockwise)

Preceding gene: 212224946

Following gene: 212224944

Centisome position: 90.1

GC content: 52.44

Gene sequence:

>900_bases
ATGAAGAAGATCACCACAATTGCTCTGTTCCTCATTCTTCCAGGGATGGCGGCGTTTCTGCTCTTCAACCTGTGGCCGAT
AATCTACTCGATTTACCTTGCCTTCACCAACGCCCAGCTCGGCAACTTTCCAATCCAGGCGCCGGATGCAGAGCCCTTCA
AGTTCGTTGGTTTAGAGAACTTCAGGTGGATACTGAGCGACGAAAAGTTCAGAAGCGCCTTTATGTGGACCTGGATATTC
GTCGCAACGAGCGTTACCCTCAAGGTTCTTGTAGGAACTTTCCTCAGCCTGCTCTACAACAGCAAATACGTCAAGGGCAA
GATGGTCTACAGGTCGCTCCTGATAATCCCATGGGCCCTACCGCTCCTCTTCTCGGTCACCGTTTGGAGGTTTATGTTTG
ATCCGGTTTTTGGTCCGATTAATCAGATTCTCAAATCGATCGGCGTGAGTACCCTTCCCAACTGGACGAACGATCCTTTC
TGGGGCCTTGTAGCTCTCAACATAATCGAGGTCTGGCTGGCCTATCCGTTTATGATAACCGTCATCACGGCGGCGCTTCA
GTCCGTTCCGGACACGCTCGTGGAAGCGGCAATAATAGACGGTGCCAACTACTGGCAGAGACTCAGGCACGTCGTTCTCC
CGATAGTCGGCAAGCCAATAGCCTTCGCCACAATACTCACCAGTGCAGCCAGCTTCCAGTACTTCATGGTGCCATACATT
TACAACGCTGGCCTATTCGAGGACAAGTTCATACTGCTCTACGGCTTCAGGAAGGCCTTTGGGGCGAGTCCCCACTACGG
AAGGGCAGCGGCGGTGATGATAATAGCGACCCTCGTGCTGGCGGTTTACATGTACGTCAACGTTAGGATAACCAAGCTCC
AGGAGGGTGCCAAGGGATGA

Upstream 100 bases:

>100_bases
CTGACATACCCGCCATACTCCAGAAGTACCAGCAGGAGATCCTGAACAACCTCGGGGGCTGAAGCCCTTTCCCTTTTCCT
ACCTTTTTGGAGGGATTGGG

Downstream 100 bases:

>100_bases
TGGGCCAAAAGAAAAAGGAGATAATCAAGAGCTTCCTCCTCACCCTCGCGGCCATTTTCATAATGTTTATCATCCTCTTC
CCAGTGTACTATATATTCAC

Product: sugar transport inner membrane protein (malf-like)

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKKITTIALFLILPGMAAFLLFNLWPIIYSIYLAFTNAQLGNFPIQAPDAEPFKFVGLENFRWILSDEKFRSAFMWTWIF
VATSVTLKVLVGTFLSLLYNSKYVKGKMVYRSLLIIPWALPLLFSVTVWRFMFDPVFGPINQILKSIGVSTLPNWTNDPF
WGLVALNIIEVWLAYPFMITVITAALQSVPDTLVEAAIIDGANYWQRLRHVVLPIVGKPIAFATILTSAASFQYFMVPYI
YNAGLFEDKFILLYGFRKAFGASPHYGRAAAVMIIATLVLAVYMYVNVRITKLQEGAKG

Sequences:

>Translated_299_residues
MKKITTIALFLILPGMAAFLLFNLWPIIYSIYLAFTNAQLGNFPIQAPDAEPFKFVGLENFRWILSDEKFRSAFMWTWIF
VATSVTLKVLVGTFLSLLYNSKYVKGKMVYRSLLIIPWALPLLFSVTVWRFMFDPVFGPINQILKSIGVSTLPNWTNDPF
WGLVALNIIEVWLAYPFMITVITAALQSVPDTLVEAAIIDGANYWQRLRHVVLPIVGKPIAFATILTSAASFQYFMVPYI
YNAGLFEDKFILLYGFRKAFGASPHYGRAAAVMIIATLVLAVYMYVNVRITKLQEGAKG
>Mature_299_residues
MKKITTIALFLILPGMAAFLLFNLWPIIYSIYLAFTNAQLGNFPIQAPDAEPFKFVGLENFRWILSDEKFRSAFMWTWIF
VATSVTLKVLVGTFLSLLYNSKYVKGKMVYRSLLIIPWALPLLFSVTVWRFMFDPVFGPINQILKSIGVSTLPNWTNDPF
WGLVALNIIEVWLAYPFMITVITAALQSVPDTLVEAAIIDGANYWQRLRHVVLPIVGKPIAFATILTSAASFQYFMVPYI
YNAGLFEDKFILLYGFRKAFGASPHYGRAAAVMIIATLVLAVYMYVNVRITKLQEGAKG

Specific function: Part of the binding-protein-dependent transport system for maltodextrin; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=31.640625, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=30, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1789861, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR007829 [H]

Pfam domain/function: PF00528 BPD_transp_1; PF05154 TM2 [H]

EC number: NA

Molecular weight: Translated: 33830; Mature: 33830

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITTIALFLILPGMAAFLLFNLWPIIYSIYLAFTNAQLGNFPIQAPDAEPFKFVGLEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
FRWILSDEKFRSAFMWTWIFVATSVTLKVLVGTFLSLLYNSKYVKGKMVYRSLLIIPWAL
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
PLLFSVTVWRFMFDPVFGPINQILKSIGVSTLPNWTNDPFWGLVALNIIEVWLAYPFMIT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VITAALQSVPDTLVEAAIIDGANYWQRLRHVVLPIVGKPIAFATILTSAASFQYFMVPYI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YNAGLFEDKFILLYGFRKAFGASPHYGRAAAVMIIATLVLAVYMYVNVRITKLQEGAKG
HCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MKKITTIALFLILPGMAAFLLFNLWPIIYSIYLAFTNAQLGNFPIQAPDAEPFKFVGLEN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
FRWILSDEKFRSAFMWTWIFVATSVTLKVLVGTFLSLLYNSKYVKGKMVYRSLLIIPWAL
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
PLLFSVTVWRFMFDPVFGPINQILKSIGVSTLPNWTNDPFWGLVALNIIEVWLAYPFMIT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VITAALQSVPDTLVEAAIIDGANYWQRLRHVVLPIVGKPIAFATILTSAASFQYFMVPYI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YNAGLFEDKFILLYGFRKAFGASPHYGRAAAVMIIATLVLAVYMYVNVRITKLQEGAKG
HCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8478935; 11463916 [H]