| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is ybaL [C]
Identifier: 212224862
GI number: 212224862
Start: 1577028
End: 1578203
Strand: Reverse
Name: ybaL [C]
Synonym: TON_1711
Alternate gene names: 212224862
Gene position: 1578203-1577028 (Counterclockwise)
Preceding gene: 212224863
Following gene: 212224861
Centisome position: 85.42
GC content: 52.3
Gene sequence:
>1176_bases GTGGACTTTCTAGCGGCGCTCGCGATTCTGCTCGTGACTGCCAAGAGCATCGAGTGGCTCTTCGAGAGAGTTGGGATACA CCCGATTATTGCCCACGTGCTCACAGGAATCGTGCTGGGACCCTTTGTTCTTGGAGCCATCGAACCAACCGATCAGCTCG GCGTCCTGGCCGAGTTCGGGCTCATAATGATGATGCTCTACATGGGACTCACCAGCAACTTTTCAGCCATAGCCCAGAAC ACGAAAAAAGCTGTGGTCGTTGCCGTCCTTGGAGTGGCTTTCTCGTTCATTCTCGGCTTTACCACGGTAGAGTTCTTCGA CAAAGGCACTTCGGCGGCGATCTTCGTCGGCGTTACCCTCGGAAACACCGCAATAGAGGTGACGAGCGGCGTCCTCGTTA AGGAGCGCGTTAAAAGAGAGATTTCATCCATTCTCATGGGAGCTGCATTCGTTGACGACATACTGGCGGTTTACCTGATA GGTATAATCACCGCAATGGCCAAGGGGAGTCTCGACGCGCTTTCCCTGGGAATACTGACCGTCAAGATATTCCTTTTCAT AGGAGCCACCTTATTAATCTCGGAGTTCGTCTTCAAGCGCTCCCGCTGGTTCTACTCAATAGTCAAGAACCTAAACGTCT TCTTCACCTTCACGCTAATATTAACTTTCGCCCTGGCAATAATAGCCGAAAAGGTCGGTCTCAACCAGATAATCGGCGCC TACCTTGCGGGACTGACGATAAGCAGACTGCGTGAGAGAAAAGATCCTCTCGTTGTGACCAGGATAAAGCTCAACGAACT CATCGAAGACCTCCAGGTCGTTCTTACGGAGTTCTTCATTCCGCTGTTCTTCATCTACGTCGGATTGATGTTCAACCCAC CGCTGGCTAGAATAAGCCTTGCTCTGATAGGAACCCTCTACCTCGCGGCAGTGCTTGGAAAGCTTCTCGGCTGTGGGCTG GGGAGCAGGCTCTTCGGCCTGAGCTGGAAGGATTCAATCCTCGTTGGTATAGGCATGGGTGGCAGGGGAAGCCTGGAGCT GGCGATACTCACCTTTGGCCTCAACACCGGGCTCATCGATCAGACCATCTTCGCGAGCGTCATAGTCGTCTCCATGATGA CAGCCTTAACGACGCCGCTGTTCTTTAAGACCTACATCAAAAGGGCAAAAGCTTAA
Upstream 100 bases:
>100_bases GTCTTTGGCACCGGTCGAGGTGCAACGCTCGCGATGATTCTTGCGATAATTATGATGGCATTCTGGATAATAGGAGCTCT GCTCGCAAGGAGGGGATGAC
Downstream 100 bases:
>100_bases ATTGAGGGGTGTGGAGTAGTGCCAGGCTGGTGAGACCATGTTCCCGAGGAAAGGCGCGAGCGAGGAAGAAGTTTTAGCAG AGCTGGAGGAGAAAACGGCG
Product: NapA-type sodium/hydrogen antiporter
Products: NA
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MDFLAALAILLVTAKSIEWLFERVGIHPIIAHVLTGIVLGPFVLGAIEPTDQLGVLAEFGLIMMMLYMGLTSNFSAIAQN TKKAVVVAVLGVAFSFILGFTTVEFFDKGTSAAIFVGVTLGNTAIEVTSGVLVKERVKREISSILMGAAFVDDILAVYLI GIITAMAKGSLDALSLGILTVKIFLFIGATLLISEFVFKRSRWFYSIVKNLNVFFTFTLILTFALAIIAEKVGLNQIIGA YLAGLTISRLRERKDPLVVTRIKLNELIEDLQVVLTEFFIPLFFIYVGLMFNPPLARISLALIGTLYLAAVLGKLLGCGL GSRLFGLSWKDSILVGIGMGGRGSLELAILTFGLNTGLIDQTIFASVIVVSMMTALTTPLFFKTYIKRAKA
Sequences:
>Translated_391_residues MDFLAALAILLVTAKSIEWLFERVGIHPIIAHVLTGIVLGPFVLGAIEPTDQLGVLAEFGLIMMMLYMGLTSNFSAIAQN TKKAVVVAVLGVAFSFILGFTTVEFFDKGTSAAIFVGVTLGNTAIEVTSGVLVKERVKREISSILMGAAFVDDILAVYLI GIITAMAKGSLDALSLGILTVKIFLFIGATLLISEFVFKRSRWFYSIVKNLNVFFTFTLILTFALAIIAEKVGLNQIIGA YLAGLTISRLRERKDPLVVTRIKLNELIEDLQVVLTEFFIPLFFIYVGLMFNPPLARISLALIGTLYLAAVLGKLLGCGL GSRLFGLSWKDSILVGIGMGGRGSLELAILTFGLNTGLIDQTIFASVIVVSMMTALTTPLFFKTYIKRAKA >Mature_391_residues MDFLAALAILLVTAKSIEWLFERVGIHPIIAHVLTGIVLGPFVLGAIEPTDQLGVLAEFGLIMMMLYMGLTSNFSAIAQN TKKAVVVAVLGVAFSFILGFTTVEFFDKGTSAAIFVGVTLGNTAIEVTSGVLVKERVKREISSILMGAAFVDDILAVYLI GIITAMAKGSLDALSLGILTVKIFLFIGATLLISEFVFKRSRWFYSIVKNLNVFFTFTLILTFALAIIAEKVGLNQIIGA YLAGLTISRLRERKDPLVVTRIKLNELIEDLQVVLTEFFIPLFFIYVGLMFNPPLARISLALIGTLYLAAVLGKLLGCGL GSRLFGLSWKDSILVGIGMGGRGSLELAILTFGLNTGLIDQTIFASVIVVSMMTALTTPLFFKTYIKRAKA
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=421, Percent_Identity=27.5534441805226, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 42313; Mature: 42313
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLAALAILLVTAKSIEWLFERVGIHPIIAHVLTGIVLGPFVLGAIEPTDQLGVLAEFG CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LIMMMLYMGLTSNFSAIAQNTKKAVVVAVLGVAFSFILGFTTVEFFDKGTSAAIFVGVTL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE GNTAIEVTSGVLVKERVKREISSILMGAAFVDDILAVYLIGIITAMAKGSLDALSLGILT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VKIFLFIGATLLISEFVFKRSRWFYSIVKNLNVFFTFTLILTFALAIIAEKVGLNQIIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH YLAGLTISRLRERKDPLVVTRIKLNELIEDLQVVLTEFFIPLFFIYVGLMFNPPLARISL HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ALIGTLYLAAVLGKLLGCGLGSRLFGLSWKDSILVGIGMGGRGSLELAILTFGLNTGLID HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCHHH QTIFASVIVVSMMTALTTPLFFKTYIKRAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFLAALAILLVTAKSIEWLFERVGIHPIIAHVLTGIVLGPFVLGAIEPTDQLGVLAEFG CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LIMMMLYMGLTSNFSAIAQNTKKAVVVAVLGVAFSFILGFTTVEFFDKGTSAAIFVGVTL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE GNTAIEVTSGVLVKERVKREISSILMGAAFVDDILAVYLIGIITAMAKGSLDALSLGILT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VKIFLFIGATLLISEFVFKRSRWFYSIVKNLNVFFTFTLILTFALAIIAEKVGLNQIIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH YLAGLTISRLRERKDPLVVTRIKLNELIEDLQVVLTEFFIPLFFIYVGLMFNPPLARISL HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ALIGTLYLAAVLGKLLGCGLGSRLFGLSWKDSILVGIGMGGRGSLELAILTFGLNTGLID HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCHHH QTIFASVIVVSMMTALTTPLFFKTYIKRAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]