| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224845
Identifier: 212224845
GI number: 212224845
Start: 1558440
End: 1559579
Strand: Reverse
Name: 212224845
Synonym: TON_1694
Alternate gene names: NA
Gene position: 1559579-1558440 (Counterclockwise)
Preceding gene: 212224846
Following gene: 212224843
Centisome position: 84.41
GC content: 52.11
Gene sequence:
>1140_bases ATGAACAGCACGCTCACCATGATGATCATTGGCATCCTAGCATTTTGGGCCGTGCTCTACGCCCTCTTCGGGAGAAAATA CGACGAAGAGAATGAAGAGGGCTTGGCTGTTGACCTTTTCATAGCTATGTGGCGAACAAAGAAACTGTTAGGCTTTATAG ACAATCTCGCCCATAGATGGAAGCGCTTCTGGAGGGTTTATGGAGATATAGGAATAGCCCTCGGCTTCCTTGGCATGGCC TATGTCTTCTACGCCCTCCTAAAGACCGCGATGAATACGATACAGACCGGAGGCGAGCAGGCCGGAGTCCAGCTTGTGAT ACCAGGCATTACGATTCCCCTCTCATACGGCCTGATAGCCCTTGTAGTTGTCATGGTCGTCCACGAGCTGAGTCATGGAG TAGTCGCAAGGGCTGAAAATCTGCCCCTAAAGTCAGTCGGCTTGGTTCTTCTCGCCGTAATCCCCGGTGCCTTTGTTGAG CCCGACGAGGAGGCCCTTGAGAAAGCCCCACTGAGAACGAGGCTGAGGGTTTACGGCGCAGGCTCGCTCGCCAACATAGT GACGGCTCTGATAGCGGTTCTCATAATCAACTTCGCAATAACCCCGGTTCTCCAGCCGGCAGGAATACTCGTCTCTGGAG TCCTTGAAGACGGTCCCGCTTACGGCGTTCTCCAGCAGGGGGATGTAATAATCGCAATGGACGGTCAGCAGATCAAGGAC ATGGAGCAGTTCATTAATTTCATGAACACGACTAAGCCAGGCCAAGTGCTGACAATCACCGTATTGAGGGGCGGGAATGA AATAAACCTCCAGCTGAAGCTCGGAGCGCACCCGGATAACCCGGAAAGAGGTTATATTGGTATTTATCCAGCACCACACT ACGTCTCAAAGGTAGGACACGAGAACATAATCTTTCCGCTGTTCTTCACGTTCTACTGGATATACGTGCTCAACCTTGGA ATCGGCCTCATGAACCTCTTCCCACTCGTTCCATTGGACGGCGGCAGGATGCTCGATGATGTAGTCAAGACGTATCTGCC GGAAAATGTGGCCAAGCCCGTAAGGTACTTCACGATAGGAGTCGGATTGTTCCTCCTAGCGCTGAACCTGTGGCCGGCCT TAAGGGGTATTATGGGCTAA
Upstream 100 bases:
>100_bases CGATGTGAGAACAAAGATATACATCCTGAAGTTCCTGGGCAGACTGTGAGTGCGATTACTTTTTAAACTCAGCTCGAAAA CGCTTTATTAGGTGACTCAA
Downstream 100 bases:
>100_bases GATATCCTTATTTTACCTCCTTTTATCCGGAATTTATAAGCTCCCGGCTCAAAGTCAGGTAGTGGAGATTTTCTTATGAT CATCTCTTCGTATTTCAGGT
Product: membrane-associated metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRWKRFWRVYGDIGIALGFLGMA YVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIALVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVE PDEEALEKAPLRTRLRVYGAGSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGHENIIFPLFFTFYWIYVLNLG IGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIGVGLFLLALNLWPALRGIMG
Sequences:
>Translated_379_residues MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRWKRFWRVYGDIGIALGFLGMA YVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIALVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVE PDEEALEKAPLRTRLRVYGAGSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGHENIIFPLFFTFYWIYVLNLG IGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIGVGLFLLALNLWPALRGIMG >Mature_379_residues MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRWKRFWRVYGDIGIALGFLGMA YVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIALVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVE PDEEALEKAPLRTRLRVYGAGSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGHENIIFPLFFTFYWIYVLNLG IGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIGVGLFLLALNLWPALRGIMG
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.solfataricus C04034 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR001193 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 41654; Mature: 41654
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRW CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KRFWRVYGDIGIALGFLGMAYVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEHHHHHHHHH LVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVEPDEEALEKAPLRTRLRVYGA HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHEEECC GSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCEEEEECCHHHHH MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGH HHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCC ENIIFPLFFTFYWIYVLNLGIGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH VGLFLLALNLWPALRGIMG HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSTLTMMIIGILAFWAVLYALFGRKYDEENEEGLAVDLFIAMWRTKKLLGFIDNLAHRW CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KRFWRVYGDIGIALGFLGMAYVFYALLKTAMNTIQTGGEQAGVQLVIPGITIPLSYGLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEHHHHHHHHH LVVVMVVHELSHGVVARAENLPLKSVGLVLLAVIPGAFVEPDEEALEKAPLRTRLRVYGA HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHEEECC GSLANIVTALIAVLIINFAITPVLQPAGILVSGVLEDGPAYGVLQQGDVIIAMDGQQIKD CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCEEEEECCHHHHH MEQFINFMNTTKPGQVLTITVLRGGNEINLQLKLGAHPDNPERGYIGIYPAPHYVSKVGH HHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCHHHHHHCCC ENIIFPLFFTFYWIYVLNLGIGLMNLFPLVPLDGGRMLDDVVKTYLPENVAKPVRYFTIG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH VGLFLLALNLWPALRGIMG HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]