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The map label for this gene is ydaO [C]

Identifier: 212224843

GI number: 212224843

Start: 1556637

End: 1557608

Strand: Reverse

Name: ydaO [C]

Synonym: TON_1692

Alternate gene names: 212224843

Gene position: 1557608-1556637 (Counterclockwise)

Preceding gene: 212224845

Following gene: 212224840

Centisome position: 84.3

GC content: 51.54

Gene sequence:

>972_bases
ATGAGATGCTCTAAATGCGGGAGACCAGCCGTCTACCATGCACGCTACACGGGAAGGTACTACTGCAAGAAGCACTTCAA
CGAGATGGTAGAGAAGAAGTTTAAGGAGACCGTTAAGAAGTACAGACTCGTAGAGAAGGGTGAAAGGATAGCCGTTGGCG
TGAGCGGCGGAAAGGACAGCGTTGTTCTTCTCCATCTCCTTGCTAAGCTCCAGAAAAAGTTCCCCTTCGAGCTGGTGGCG
GTGACGATAGACGAGGGAATAGCCGGCTACCGTCCACCGAGCGTGGAGATAGCCAGAAGAAACGCGGAGAAGCTCGGTAT
AGAGCATCATATTTATTCGTTCAAGGAATACATAGGATTCACCCTCGACGAAACAGTTGAGATAATGGGAAGCTTTGAGA
AGGGTGAAAGAGTCGGAGCCTGCTCCTACTGCGGAGTTTGGAGGAGGTGGCTTCTCAACCACGCGGCCAAAGAGGTGGAG
GCTGATAAGTTAGCCGTCGGCCACAACCTCGACGATGAGGTTCAGATGTTCATAATGAACATACTTAGGGGAGACATTGC
CCGCTTGGGCAGAACCGGGCCTTACTACGAAGAGATTCATCCTGAGCTTGTTCCAAGAATAAAGCCCCTCCGCGAGATTC
CCGAGAAGGAGATAATACTCTACGCAGTGCTGAACGAGATTGAAGTCGATTTGAGCGAGTGCCCCTACGCTGTCGAAGCC
TTCCGCGCCGAGATAAGGGACTGGATCAACGAGATGGAAGAGAAGCATCCAGGAACCAAGTACCAGATTCTCAGGAGCTA
CGACAAACTCTTCCCTCTCATAGCAAAAACCTATACCAAACGGACGAGCGAGCTTAACCGCTGCAAGATATGCGGCCAGC
CGACAACGGGCGAGATATGCAAGGCCTGCCAGTTCAGGTTACAGGTAGAGAGAAAGGCTAGGGAAAAGGGGCTGACCTTC
AGAATGGAATAG

Upstream 100 bases:

>100_bases
CACCAATACTTTTGTCGATTTAAACAATATTAATATTTCGTTAGGATAGATTCCAATGTGAATTTTTTTAAGCCCACTAG
ATTACCCACTTAGGGATAGC

Downstream 100 bases:

>100_bases
AAGAGGGTTCCTTCAGAGGCCTGCTTGATGTGCTCGAAGTTCTACAAGGTAATCGCCGATAGACCTAGAACTACAGTTAA
AATAACGGAAACGGAGCAAA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRCSKCGRPAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDSVVLLHLLAKLQKKFPFELVA
VTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIGFTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNHAAKEVE
ADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIILYAVLNEIEVDLSECPYAVEA
FRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEICKACQFRLQVERKAREKGLTF
RME

Sequences:

>Translated_323_residues
MRCSKCGRPAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDSVVLLHLLAKLQKKFPFELVA
VTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIGFTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNHAAKEVE
ADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIILYAVLNEIEVDLSECPYAVEA
FRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEICKACQFRLQVERKAREKGLTF
RME
>Mature_323_residues
MRCSKCGRPAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDSVVLLHLLAKLQKKFPFELVA
VTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIGFTLDETVEIMGSFEKGERVGACSYCGVWRRWLLNHAAKEVE
ADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIILYAVLNEIEVDLSECPYAVEA
FRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEICKACQFRLQVERKAREKGLTF
RME

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=290, Percent_Identity=32.7586206896552, Blast_Score=161, Evalue=8e-40,
Organism=Escherichia coli, GI1787606, Length=255, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17540090, Length=302, Percent_Identity=34.4370860927152, Blast_Score=184, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI193211090, Length=259, Percent_Identity=27.027027027027, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321227, Length=137, Percent_Identity=39.4160583941606, Blast_Score=107, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24651972, Length=302, Percent_Identity=35.4304635761589, Blast_Score=186, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 37447; Mature: 37447

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00589 PTS_HPR_SER ; PS01263 UPF0021

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCSKCGRPAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDS
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
VVLLHLLAKLQKKFPFELVAVTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIGF
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCC
TLDETVEIMGSFEKGERVGACSYCGVWRRWLLNHAAKEVEADKLAVGHNLDDEVQMFIMN
CHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIILYAVLNEIEVDLSECPYAVEA
HHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHCHHHCCHHHHH
FRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEIC
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHH
KACQFRLQVERKAREKGLTFRME
HHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MRCSKCGRPAVYHARYTGRYYCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDS
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
VVLLHLLAKLQKKFPFELVAVTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIGF
HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCC
TLDETVEIMGSFEKGERVGACSYCGVWRRWLLNHAAKEVEADKLAVGHNLDDEVQMFIMN
CHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIILYAVLNEIEVDLSECPYAVEA
HHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHCHHHCCHHHHH
FRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELNRCKICGQPTTGEIC
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHH
KACQFRLQVERKAREKGLTFRME
HHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]