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The map label for this gene is yddH [C]

Identifier: 212224786

GI number: 212224786

Start: 1494608

End: 1495141

Strand: Reverse

Name: yddH [C]

Synonym: TON_1635

Alternate gene names: 212224786

Gene position: 1495141-1494608 (Counterclockwise)

Preceding gene: 212224787

Following gene: 212224785

Centisome position: 80.92

GC content: 51.87

Gene sequence:

>534_bases
ATGAAGCCGTACCGACTCCTCTATCCTTTGAGGACTTACCTCATCGTGGCAGGAAATGGTGAGGAGACAAACGTAATGGC
CGCCGACTGGGTCACGATAGTCTCGTTCAGGCCCTTCATGGTTGGTGTTGCCATTGCTCCTGAGAGGTATACATGGGGGC
TGATAAAGAAGTACCGCGAGTTTGTCATCAGCGTGCCGAGTCTCGATATGCTCCGGGACGTCTGGATAGCCGGCACTAGA
CACGGCCCTGAGAAGCTGAAAGAGATGAAAATAACCCTTGTTCCATCGAAGGCTCTTGAAACCCCCAGCATAAAAGAGGC
CCTTGCGAACGTTGAGTGCAGGCTCGTGGATGAGAGGGACTATGGCGATCACACATGGTTCGTTGGGGAGGTTGTAGATA
GCTCATACCGAAAGGATGCCTTCGAAAACGACAGGCCAAATCTTGACGCCAAATTCCTTGCTCATACTGCATGGACGGAT
TTTGTGACCTTCGAGAAGCACGTCCATCGTCCTCCTCAAGTCCACTCTCGATAA

Upstream 100 bases:

>100_bases
CCCTACACCGGAGAGGGCAGCCAAAGCTTTGGCGTGGCTCTCCCGTCGCTGAGGCTTTTAACTTTTTAAGGTGAAGCCCA
ATTCATTTTTGGTGGTTCTC

Downstream 100 bases:

>100_bases
CCTTTTATACTATTTTTACACTCCACCCTTGATGATAGCTCTTGGCATAGAGGGGACGGCACACACTCTTGGCATAGGTA
TAGTCACCGAGAAGAAAGTT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKPYRLLYPLRTYLIVAGNGEETNVMAADWVTIVSFRPFMVGVAIAPERYTWGLIKKYREFVISVPSLDMLRDVWIAGTR
HGPEKLKEMKITLVPSKALETPSIKEALANVECRLVDERDYGDHTWFVGEVVDSSYRKDAFENDRPNLDAKFLAHTAWTD
FVTFEKHVHRPPQVHSR

Sequences:

>Translated_177_residues
MKPYRLLYPLRTYLIVAGNGEETNVMAADWVTIVSFRPFMVGVAIAPERYTWGLIKKYREFVISVPSLDMLRDVWIAGTR
HGPEKLKEMKITLVPSKALETPSIKEALANVECRLVDERDYGDHTWFVGEVVDSSYRKDAFENDRPNLDAKFLAHTAWTD
FVTFEKHVHRPPQVHSR
>Mature_177_residues
MKPYRLLYPLRTYLIVAGNGEETNVMAADWVTIVSFRPFMVGVAIAPERYTWGLIKKYREFVISVPSLDMLRDVWIAGTR
HGPEKLKEMKITLVPSKALETPSIKEALANVECRLVDERDYGDHTWFVGEVVDSSYRKDAFENDRPNLDAKFLAHTAWTD
FVTFEKHVHRPPQVHSR

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20466; Mature: 20466

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYRLLYPLRTYLIVAGNGEETNVMAADWVTIVSFRPFMVGVAIAPERYTWGLIKKYRE
CCCCCCEEECEEEEEEECCCCCCEEEEEHHEEEEEECHHHEEEEECCCCCHHHHHHHHHH
FVISVPSLDMLRDVWIAGTRHGPEKLKEMKITLVPSKALETPSIKEALANVECRLVDERD
HHCCCCCHHHHHHHHHCCCCCCHHHHHHEEEEEECCHHCCCCHHHHHHCCCEEEEEECCC
YGDHTWFVGEVVDSSYRKDAFENDRPNLDAKFLAHTAWTDFVTFEKHVHRPPQVHSR
CCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPYRLLYPLRTYLIVAGNGEETNVMAADWVTIVSFRPFMVGVAIAPERYTWGLIKKYRE
CCCCCCEEECEEEEEEECCCCCCEEEEEHHEEEEEECHHHEEEEECCCCCHHHHHHHHHH
FVISVPSLDMLRDVWIAGTRHGPEKLKEMKITLVPSKALETPSIKEALANVECRLVDERD
HHCCCCCHHHHHHHHHCCCCCCHHHHHHEEEEEECCHHCCCCHHHHHHCCCEEEEEECCC
YGDHTWFVGEVVDSSYRKDAFENDRPNLDAKFLAHTAWTDFVTFEKHVHRPPQVHSR
CCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]