| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224761
Identifier: 212224761
GI number: 212224761
Start: 1470299
End: 1471516
Strand: Reverse
Name: 212224761
Synonym: TON_1610
Alternate gene names: NA
Gene position: 1471516-1470299 (Counterclockwise)
Preceding gene: 212224762
Following gene: 212224760
Centisome position: 79.64
GC content: 55.01
Gene sequence:
>1218_bases ATGAAGAGGGTTATGGTGCTGATTGTGTTTTTGATGTTCGCTCTAACACCCCTGTCCGAGGCCTGCATGAGCCCCACCGA TGTCTATGCGGTCGAGGTCGTTCTGAACAAGCCAGGGATAATTTACAAGCCGTATCCCGCTTTCAATGCTCTTCACAACG CAATAGTCGAGAATGATACCTTCATCTTTCGCTCCCACTACGACAAAAGGCTTGTAGTTGTACTGTGGAACGCCAGCGAC GGTCCCCACCTGAGGATAGAGATTCCGGCAGAGTGGAGAGAGACTGGGTTGACTAAAACAGCCTTCAACGCCTCGCTCCT GATAACAACTGACGCACTTGAAAAGTTGAAGGCTGATGGATGGAAAACGAGGGACAATCTAACTTTTACCAGGGACAACG TCACGATAACCCTGACGCCGGTGGCTGGGGAAGAGTGCACTTTGGATGGGGACTGCGCTACTGGCGGCTGCTCCGGGGAA GTATGCGCTCCAAGGGAAGAGGCCACCAGGATAGTAACCCCTTGCGTCTATCGCGAGTGGTACACCTGCCTTGGCCTGAC GAGCTGCGGCTGCGTAAACGGGATCTGCACCTGGAAGCCAAACGATGCCTTTGAGTCCTGCCTGAGGGAGCACGGGATTG ATCCTGAGAAAGTTATCCGGGCGGGTCTCGTGAGGGTGGAGGTTGAAGCTTACAACATGGAGCCTGGAGAGGTTGAGGCT GCCGTTAAGGACTTTCTCTCGGCCTTTGGTGTTGACTGCAACCCGGCGTTGACCTTCGTGGAACCCATGAGTGGAAGGCT CGTTCCTGTGGTTGATTCCTCCGAGGTGAACTTCTCGGAGGCGGTAAAAGTCGAGCTCGAGTGGCTGAGGGATGTCGGGG TGCTCCAAATAAGCGACGAAGACATCGAAGCGATAGCTAAAGTTGCCGGGCCTGGAAAGGCGGGACCTAACTCCCACATC GGCTGGTACGAGACAAAAGACGGCACTTATGCGTGGATACCCTACGAGGAGAGCCTTAATCCAATGCTGGTCAGGTGCAC CACCGATGAGGTGCCCACCTACAACCTCCCGAACGGAACTGCCTATGTTGGCCCAACAGTAACCCAGTCCCCATCCACAG ATGCCACCACGTCGACGGAGAGTTCACCAAATGGTGGAATATGCGGTCCTGCCTTAGTCGTTGGGCTGTCGCTGTTTGCC TTCCTGCGGAGGAGGTGA
Upstream 100 bases:
>100_bases CTCAAGCCTCGCCCTTAGCCGGGAGGAGGTCAGTTCAAGCTGGATTGAAGCGATGGGAAGGGGTATATATTTCCTCTCCT TATTTCCTACGGTGGAGATC
Downstream 100 bases:
>100_bases ACTTTTAAACCTCTCTCTCCAACTTTTCACCATGGACTGGAAAAGAGGGCTTCGCGAAGAGGGTTTTCTCGAGCTGGACG GCTTTAGGGTGGAGCTTACC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MKRVMVLIVFLMFALTPLSEACMSPTDVYAVEVVLNKPGIIYKPYPAFNALHNAIVENDTFIFRSHYDKRLVVVLWNASD GPHLRIEIPAEWRETGLTKTAFNASLLITTDALEKLKADGWKTRDNLTFTRDNVTITLTPVAGEECTLDGDCATGGCSGE VCAPREEATRIVTPCVYREWYTCLGLTSCGCVNGICTWKPNDAFESCLREHGIDPEKVIRAGLVRVEVEAYNMEPGEVEA AVKDFLSAFGVDCNPALTFVEPMSGRLVPVVDSSEVNFSEAVKVELEWLRDVGVLQISDEDIEAIAKVAGPGKAGPNSHI GWYETKDGTYAWIPYEESLNPMLVRCTTDEVPTYNLPNGTAYVGPTVTQSPSTDATTSTESSPNGGICGPALVVGLSLFA FLRRR
Sequences:
>Translated_405_residues MKRVMVLIVFLMFALTPLSEACMSPTDVYAVEVVLNKPGIIYKPYPAFNALHNAIVENDTFIFRSHYDKRLVVVLWNASD GPHLRIEIPAEWRETGLTKTAFNASLLITTDALEKLKADGWKTRDNLTFTRDNVTITLTPVAGEECTLDGDCATGGCSGE VCAPREEATRIVTPCVYREWYTCLGLTSCGCVNGICTWKPNDAFESCLREHGIDPEKVIRAGLVRVEVEAYNMEPGEVEA AVKDFLSAFGVDCNPALTFVEPMSGRLVPVVDSSEVNFSEAVKVELEWLRDVGVLQISDEDIEAIAKVAGPGKAGPNSHI GWYETKDGTYAWIPYEESLNPMLVRCTTDEVPTYNLPNGTAYVGPTVTQSPSTDATTSTESSPNGGICGPALVVGLSLFA FLRRR >Mature_405_residues MKRVMVLIVFLMFALTPLSEACMSPTDVYAVEVVLNKPGIIYKPYPAFNALHNAIVENDTFIFRSHYDKRLVVVLWNASD GPHLRIEIPAEWRETGLTKTAFNASLLITTDALEKLKADGWKTRDNLTFTRDNVTITLTPVAGEECTLDGDCATGGCSGE VCAPREEATRIVTPCVYREWYTCLGLTSCGCVNGICTWKPNDAFESCLREHGIDPEKVIRAGLVRVEVEAYNMEPGEVEA AVKDFLSAFGVDCNPALTFVEPMSGRLVPVVDSSEVNFSEAVKVELEWLRDVGVLQISDEDIEAIAKVAGPGKAGPNSHI GWYETKDGTYAWIPYEESLNPMLVRCTTDEVPTYNLPNGTAYVGPTVTQSPSTDATTSTESSPNGGICGPALVVGLSLFA FLRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44294; Mature: 44294
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVMVLIVFLMFALTPLSEACMSPTDVYAVEVVLNKPGIIYKPYPAFNALHNAIVENDT CHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHCCCE FIFRSHYDKRLVVVLWNASDGPHLRIEIPAEWRETGLTKTAFNASLLITTDALEKLKADG EEEEECCCCEEEEEEEECCCCCEEEEEECHHHHHCCCEEEECCCEEEEEHHHHHHHHCCC WKTRDNLTFTRDNVTITLTPVAGEECTLDGDCATGGCSGEVCAPREEATRIVTPCVYREW CCCCCCEEEEECCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHH YTCLGLTSCGCVNGICTWKPNDAFESCLREHGIDPEKVIRAGLVRVEVEAYNMEPGEVEA HHHHCCCCCCHHCCEEECCCCHHHHHHHHHCCCCHHHHHHHCEEEEEEEEECCCCHHHHH AVKDFLSAFGVDCNPALTFVEPMSGRLVPVVDSSEVNFSEAVKVELEWLRDVGVLQISDE HHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCHHHHHEEEEEHHHCCCEEEECCH DIEAIAKVAGPGKAGPNSHIGWYETKDGTYAWIPYEESLNPMLVRCTTDEVPTYNLPNGT HHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEHHCCCCCEEEEEECCCCCCEECCCCC AYVGPTVTQSPSTDATTSTESSPNGGICGPALVVGLSLFAFLRRR EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRVMVLIVFLMFALTPLSEACMSPTDVYAVEVVLNKPGIIYKPYPAFNALHNAIVENDT CHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHCCCE FIFRSHYDKRLVVVLWNASDGPHLRIEIPAEWRETGLTKTAFNASLLITTDALEKLKADG EEEEECCCCEEEEEEEECCCCCEEEEEECHHHHHCCCEEEECCCEEEEEHHHHHHHHCCC WKTRDNLTFTRDNVTITLTPVAGEECTLDGDCATGGCSGEVCAPREEATRIVTPCVYREW CCCCCCEEEEECCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHH YTCLGLTSCGCVNGICTWKPNDAFESCLREHGIDPEKVIRAGLVRVEVEAYNMEPGEVEA HHHHCCCCCCHHCCEEECCCCHHHHHHHHHCCCCHHHHHHHCEEEEEEEEECCCCHHHHH AVKDFLSAFGVDCNPALTFVEPMSGRLVPVVDSSEVNFSEAVKVELEWLRDVGVLQISDE HHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCHHHHHEEEEEHHHCCCEEEECCH DIEAIAKVAGPGKAGPNSHIGWYETKDGTYAWIPYEESLNPMLVRCTTDEVPTYNLPNGT HHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEHHCCCCCEEEEEECCCCCCEECCCCC AYVGPTVTQSPSTDATTSTESSPNGGICGPALVVGLSLFAFLRRR EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA