| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224762
Identifier: 212224762
GI number: 212224762
Start: 1471678
End: 1472895
Strand: Reverse
Name: 212224762
Synonym: TON_1611
Alternate gene names: NA
Gene position: 1472895-1471678 (Counterclockwise)
Preceding gene: 212224763
Following gene: 212224761
Centisome position: 79.72
GC content: 50.9
Gene sequence:
>1218_bases ATGGATATAGTAAAGCGCTATACCTTACTTTACATCTTCATGAATACAGGCTTCATTGGGAACCTCCTCATCGTCTACTA CCTCTCAAAGGGCCTTACATATGCCCAGATAGGCATCGCGACATCGATACTGACTGTGGGATTCTTCCTGTTTGAGGTCC CGACAGGTGTGGTCGCGGACAAGATGAGCAGGAAGCTCAGCGTTCTGGTGGGCTTTGCGATAAATATAACGGCCATGATA TTCCTGATATTCCTTAGGGGATTCCCTATGTTACTCATTTATGCCATTGTTGCTTCGTTCGGCGCAACGTTCGTGAGCGG AAGCCTCCAAGCGTGGCTCTTTGACAACCTCAAACACCTTGGGATGGAAAGAGAATACCGGAGCCTAATGAGGGACATTA AAACCCTTACGATTCCACTCTCGGCACTAGCCATAGCGATCGGAGGAATCCTCGCCCAGCTCTACGGCTTCTGGCTTCCC CTTCTTCTTACGTTAATCCTTGAAATAGCTACCCTTATCGTGGCCTACACGATTCCAGAATATGAATTCAAAAAACCAGA GCGCTCATACCTCTCACACACTCTCCATTCATTCAAGGACATCCTCCAGCCCCAGCTCTTCTGGCTGGTGGTTCTCTCGA TAACCGTCGTCATGGCCACGAACCAGTTCCGGAAGTTCTTCGAGCCCTACCTCGGTGAGATACTCGCAAAAAGCCTTGGA ACGACCTTAATGGGAACCCTTGGACTCCTTGGAATTGTTGAATCCATCGTGAAGATTATCCCAAGGCTCATAGGCGTTCG CTTAAGGGACTCGTGGAGCGTTAAGGCCTACTCCCTTGCCCCGGTTGTCATTCCAGTATTGACGGCATTGTCGGTCGTTT ACCAGAATCCGCTTTGGATTATTGCCATTGGGATTTTCGTTACGGTGATTCACACGGCCTTCTCCTTTAACCTTGGGATA GAGATCCAGTACAGGATTCCGAGCGAGAAGAGGGCCACCATACTGTCCGTTTACTCCATGGTCTCGGCACTGGTCATGAG CGTTTTCTACTTCATCTACGGGTTTGCCGTTGATTGGCTTGGGCTTGGGGGGGCGAGACTGGTGTTTGCCATAGCGTTGC TGGTTGCTGGAATCTTCCTGAAGGCCGGTGAAATCGTGGGGCCCCTCGGGGAGACCCTACGGCTCAGGCACGCGGAGGCT ATCCCAAATGAGCGGTAG
Upstream 100 bases:
>100_bases CCAAGGGACACATTGATACTTACCTGGAAAGGAGATAACCTGAATTCTTCTAACATTTTTATTTTTGTCTGCGCTGTAAT CGGGAGACAGGTGATGGAAT
Downstream 100 bases:
>100_bases GCCGTATCCTAAACAATACAATGGCAAATTTGGGAATTGGATGGCCTTTGACTTTTCTTTTCTCAAGCCTCGCCCTTAGC CGGGAGGAGGTCAGTTCAAG
Product: permease
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Permease; Permease Facilitator Superfamily
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MDIVKRYTLLYIFMNTGFIGNLLIVYYLSKGLTYAQIGIATSILTVGFFLFEVPTGVVADKMSRKLSVLVGFAINITAMI FLIFLRGFPMLLIYAIVASFGATFVSGSLQAWLFDNLKHLGMEREYRSLMRDIKTLTIPLSALAIAIGGILAQLYGFWLP LLLTLILEIATLIVAYTIPEYEFKKPERSYLSHTLHSFKDILQPQLFWLVVLSITVVMATNQFRKFFEPYLGEILAKSLG TTLMGTLGLLGIVESIVKIIPRLIGVRLRDSWSVKAYSLAPVVIPVLTALSVVYQNPLWIIAIGIFVTVIHTAFSFNLGI EIQYRIPSEKRATILSVYSMVSALVMSVFYFIYGFAVDWLGLGGARLVFAIALLVAGIFLKAGEIVGPLGETLRLRHAEA IPNER
Sequences:
>Translated_405_residues MDIVKRYTLLYIFMNTGFIGNLLIVYYLSKGLTYAQIGIATSILTVGFFLFEVPTGVVADKMSRKLSVLVGFAINITAMI FLIFLRGFPMLLIYAIVASFGATFVSGSLQAWLFDNLKHLGMEREYRSLMRDIKTLTIPLSALAIAIGGILAQLYGFWLP LLLTLILEIATLIVAYTIPEYEFKKPERSYLSHTLHSFKDILQPQLFWLVVLSITVVMATNQFRKFFEPYLGEILAKSLG TTLMGTLGLLGIVESIVKIIPRLIGVRLRDSWSVKAYSLAPVVIPVLTALSVVYQNPLWIIAIGIFVTVIHTAFSFNLGI EIQYRIPSEKRATILSVYSMVSALVMSVFYFIYGFAVDWLGLGGARLVFAIALLVAGIFLKAGEIVGPLGETLRLRHAEA IPNER >Mature_405_residues MDIVKRYTLLYIFMNTGFIGNLLIVYYLSKGLTYAQIGIATSILTVGFFLFEVPTGVVADKMSRKLSVLVGFAINITAMI FLIFLRGFPMLLIYAIVASFGATFVSGSLQAWLFDNLKHLGMEREYRSLMRDIKTLTIPLSALAIAIGGILAQLYGFWLP LLLTLILEIATLIVAYTIPEYEFKKPERSYLSHTLHSFKDILQPQLFWLVVLSITVVMATNQFRKFFEPYLGEILAKSLG TTLMGTLGLLGIVESIVKIIPRLIGVRLRDSWSVKAYSLAPVVIPVLTALSVVYQNPLWIIAIGIFVTVIHTAFSFNLGI EIQYRIPSEKRATILSVYSMVSALVMSVFYFIYGFAVDWLGLGGARLVFAIALLVAGIFLKAGEIVGPLGETLRLRHAEA IPNER
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45088; Mature: 45088
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVKRYTLLYIFMNTGFIGNLLIVYYLSKGLTYAQIGIATSILTVGFFLFEVPTGVVAD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH KMSRKLSVLVGFAINITAMIFLIFLRGFPMLLIYAIVASFGATFVSGSLQAWLFDNLKHL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC GMEREYRSLMRDIKTLTIPLSALAIAIGGILAQLYGFWLPLLLTLILEIATLIVAYTIPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YEFKKPERSYLSHTLHSFKDILQPQLFWLVVLSITVVMATNQFRKFFEPYLGEILAKSLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLMGTLGLLGIVESIVKIIPRLIGVRLRDSWSVKAYSLAPVVIPVLTALSVVYQNPLWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHH IAIGIFVTVIHTAFSFNLGIEIQYRIPSEKRATILSVYSMVSALVMSVFYFIYGFAVDWL HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGGARLVFAIALLVAGIFLKAGEIVGPLGETLRLRHAEAIPNER CCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MDIVKRYTLLYIFMNTGFIGNLLIVYYLSKGLTYAQIGIATSILTVGFFLFEVPTGVVAD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH KMSRKLSVLVGFAINITAMIFLIFLRGFPMLLIYAIVASFGATFVSGSLQAWLFDNLKHL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC GMEREYRSLMRDIKTLTIPLSALAIAIGGILAQLYGFWLPLLLTLILEIATLIVAYTIPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YEFKKPERSYLSHTLHSFKDILQPQLFWLVVLSITVVMATNQFRKFFEPYLGEILAKSLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLMGTLGLLGIVESIVKIIPRLIGVRLRDSWSVKAYSLAPVVIPVLTALSVVYQNPLWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHH IAIGIFVTVIHTAFSFNLGIEIQYRIPSEKRATILSVYSMVSALVMSVFYFIYGFAVDWL HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGGARLVFAIALLVAGIFLKAGEIVGPLGETLRLRHAEAIPNER CCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA