The gene/protein map for NC_011529 is currently unavailable.
Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224699

Identifier: 212224699

GI number: 212224699

Start: 1422170

End: 1422832

Strand: Reverse

Name: 212224699

Synonym: TON_1548

Alternate gene names: NA

Gene position: 1422832-1422170 (Counterclockwise)

Preceding gene: 212224701

Following gene: 212224698

Centisome position: 77.01

GC content: 52.04

Gene sequence:

>663_bases
ATGAAGCACCGTAAAGTGTCCCTTGCACTCTTCGCACTCTCGCTCTTTCCGGCCTTCGCCGTTAGCTACGACTTTGGAAA
GCTTCCCTCAAAGCTCCAAGAGGAAGCGTTGAGTGCAGTAATAACCGCCGACGTCCTCTCCAATTGGGTTCCGCCGTTTA
TCAAATACCTCCTGGCCCCGTTTGTTTTAATATACCTTCTATTCATCTTCGGCTCCGAGTTCGAGAGTGGAAGAGCAGCG
TTGATGCTCAGCAAGTCCCTCACGAAGAGGCGCTACTTTATGGGATGGATAACGCAAGGTGTAGAGCTTGCTTTAATCCC
TGCCCTTGGCATGGTCCTCTCCGGAAGTCTGGCGATGCTCTACTACGGCCTCGATCCTGAAGACTACATATTGGGCGCAA
TCGGCCTTTCGGTAGCTCTCATCGGTGTTGTGGGAGTGGCCCTCCTAATTATTCCGGCCGTGAGAAGCGGGGACACCGGC
GTTTTCCTTGGGATTGGAGCTTTTATAACCCTCCTTCTGGCCTCAAATCTTGACTTGGGCATTTCGCTTGACTTTCTACC
CTTCAACTATCTCCAAAATGCCCTCTCATTTACCAGAACTGGAATAGACACCTCCCCGGGGCAGTCATCACCATCCTGTC
CTTCTCCCTGCTCTCCACTCTAG

Upstream 100 bases:

>100_bases
TCGTTCCCTACTTTGCCCTTGGCTCCCTGTTTCCTTTTGTCGGCTTCGTGCTCTCCCATCAAGTTACAAGGCTTGAACTA
AACTCGTGGAGGGCTGCGGG

Downstream 100 bases:

>100_bases
TGGGTTCCGAGATTTTCCGGAGAACGGAGCTTAGGAACGCTCGACTCAACGTCTCCCTGGCAGCCCCCGTCCCGTCCCGC
GGCATCACCGGTCTCTTCCT

Product: ABC-type transport system, permease component, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKHRKVSLALFALSLFPAFAVSYDFGKLPSKLQEEALSAVITADVLSNWVPPFIKYLLAPFVLIYLLFIFGSEFESGRAA
LMLSKSLTKRRYFMGWITQGVELALIPALGMVLSGSLAMLYYGLDPEDYILGAIGLSVALIGVVGVALLIIPAVRSGDTG
VFLGIGAFITLLLASNLDLGISLDFLPFNYLQNALSFTRTGIDTSPGQSSPSCPSPCSPL

Sequences:

>Translated_220_residues
MKHRKVSLALFALSLFPAFAVSYDFGKLPSKLQEEALSAVITADVLSNWVPPFIKYLLAPFVLIYLLFIFGSEFESGRAA
LMLSKSLTKRRYFMGWITQGVELALIPALGMVLSGSLAMLYYGLDPEDYILGAIGLSVALIGVVGVALLIIPAVRSGDTG
VFLGIGAFITLLLASNLDLGISLDFLPFNYLQNALSFTRTGIDTSPGQSSPSCPSPCSPL
>Mature_220_residues
MKHRKVSLALFALSLFPAFAVSYDFGKLPSKLQEEALSAVITADVLSNWVPPFIKYLLAPFVLIYLLFIFGSEFESGRAA
LMLSKSLTKRRYFMGWITQGVELALIPALGMVLSGSLAMLYYGLDPEDYILGAIGLSVALIGVVGVALLIIPAVRSGDTG
VFLGIGAFITLLLASNLDLGISLDFLPFNYLQNALSFTRTGIDTSPGQSSPSCPSPCSPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23577; Mature: 23577

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHRKVSLALFALSLFPAFAVSYDFGKLPSKLQEEALSAVITADVLSNWVPPFIKYLLAP
CCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FVLIYLLFIFGSEFESGRAALMLSKSLTKRRYFMGWITQGVELALIPALGMVLSGSLAML
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE
YYGLDPEDYILGAIGLSVALIGVVGVALLIIPAVRSGDTGVFLGIGAFITLLLASNLDLG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCC
ISLDFLPFNYLQNALSFTRTGIDTSPGQSSPSCPSPCSPL
EEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHRKVSLALFALSLFPAFAVSYDFGKLPSKLQEEALSAVITADVLSNWVPPFIKYLLAP
CCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FVLIYLLFIFGSEFESGRAALMLSKSLTKRRYFMGWITQGVELALIPALGMVLSGSLAML
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE
YYGLDPEDYILGAIGLSVALIGVVGVALLIIPAVRSGDTGVFLGIGAFITLLLASNLDLG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCC
ISLDFLPFNYLQNALSFTRTGIDTSPGQSSPSCPSPCSPL
EEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA