| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224701
Identifier: 212224701
GI number: 212224701
Start: 1423097
End: 1423444
Strand: Reverse
Name: 212224701
Synonym: TON_1550
Alternate gene names: NA
Gene position: 1423444-1423097 (Counterclockwise)
Preceding gene: 212224702
Following gene: 212224699
Centisome position: 77.04
GC content: 53.16
Gene sequence:
>348_bases ATGGGTCGGAACGTTGGCCTCTTGCTGGTTGGTATGTTCCTCATCGTCTTGGTCGCGGGGTGCATTGAGGGAGGGAACTT TGTTTACTCGAAGGGCAAGATTATTGGGCCGCATAGAGAGCTTGATTATTCCTTTAAGGGGCCTGCGACTTTGGAGATAG GGGTCTCAGGAAACGGGCCGTTCACCCTGCTCATAATATCGTCCGATGGCTCGAAGGAACTGTTCAAGCGAACAAACGTA ACCGAGGTCAAAGAGACGGTGGAGCTTCCGGAGGGTTCCTGGAGGGTCATCATCAGAAACGAGGGTGATAGCTCCATAAG CCTCGACATAAGCCTCCGCGGGAAGTGA
Upstream 100 bases:
>100_bases TTGATTGGTTCTCATACTGTTTGTAAGCGGGTAAAAATTTATATAGCTAGTGGTCATTTTTGTGACGGGATTTGTTAAAT TCAAAATCGGGGGGCTGTAG
Downstream 100 bases:
>100_bases ACACCCGTGATAGCGACATAATGTTCAACGTTAACACGCGCTAGCAATTGGAGAGAGCTATCATGTGGCTTTTTCATTTT GAGCTGAAAAGGCTTGTCCG
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGRNVGLLLVGMFLIVLVAGCIEGGNFVYSKGKIIGPHRELDYSFKGPATLEIGVSGNGPFTLLIISSDGSKELFKRTNV TEVKETVELPEGSWRVIIRNEGDSSISLDISLRGK
Sequences:
>Translated_115_residues MGRNVGLLLVGMFLIVLVAGCIEGGNFVYSKGKIIGPHRELDYSFKGPATLEIGVSGNGPFTLLIISSDGSKELFKRTNV TEVKETVELPEGSWRVIIRNEGDSSISLDISLRGK >Mature_114_residues GRNVGLLLVGMFLIVLVAGCIEGGNFVYSKGKIIGPHRELDYSFKGPATLEIGVSGNGPFTLLIISSDGSKELFKRTNVT EVKETVELPEGSWRVIIRNEGDSSISLDISLRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12411; Mature: 12279
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRNVGLLLVGMFLIVLVAGCIEGGNFVYSKGKIIGPHRELDYSFKGPATLEIGVSGNGP CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCCCEEEEEEECCCCC FTLLIISSDGSKELFKRTNVTEVKETVELPEGSWRVIIRNEGDSSISLDISLRGK EEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure GRNVGLLLVGMFLIVLVAGCIEGGNFVYSKGKIIGPHRELDYSFKGPATLEIGVSGNGP CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCCCEEEEEEECCCCC FTLLIISSDGSKELFKRTNVTEVKETVELPEGSWRVIIRNEGDSSISLDISLRGK EEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA