| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224691
Identifier: 212224691
GI number: 212224691
Start: 1412197
End: 1413594
Strand: Reverse
Name: 212224691
Synonym: TON_1540
Alternate gene names: NA
Gene position: 1413594-1412197 (Counterclockwise)
Preceding gene: 212224692
Following gene: 212224685
Centisome position: 76.51
GC content: 53.43
Gene sequence:
>1398_bases ATGAGGGGCTTCACTCACTACATATCCGGTCTGGCGGCGGCGACCTTCTTCCCTGCTCTGGTCGCGGACTTGCGGATGGG CATCCTCATTCCAGTCATAGCTGCAGCTGCGGCATATTTCCCCGACTTCGTCGACTTTAAATTCGGCAAGTTCTTCAGCA GGAGGGACTACGAAATAGATCCGGCTCCATGGGACGACAAGAAGCACTACGCACCAAAACTCGTTAAGGTTGCTGAACTG AATGAGAAAAACCGCTACCAGTTCTTTGCAGTTCAGGGCAAGGTCAGCGAAATAGTCGAGAGGGGCGAGGATACGCTGGT CTTTAAGATGGTTGATGAGAACGGAAACGTCAAAACAGTCGAGAAGCCATACAAGAGCATAATCTTCAAGCTTACAGATG AGACCGGCACCATAACGGTAGAGGCCTTCGGGGAAGACTACGAGTTCTTTGAAGAGGAGTTCGGTGAGATAGCCTTTGGG AAGGAGATGCTGGTCTTTGGCTATGTCGACGTTGATGATGACGGAATAAAGCTTGTTGTCTCCGACGCTCCCCATCCACA GGGCATAGCCGAGACCATAGCCAAGGCCATAGAGGAAGCCTACGAGAAAGGTGAAACTATAGTCAAGATACACAACATTC GCCTGCCTGGAGATGTCTACAGGCGGTTCTTCATACACCTCGACCCGCCGAAGAGGGAAGTCCGCGTTGAGATGGGCCCG ATTGTAACTCCCGGCGGTGTTGCCATCGGCGGTGAAGTTCCAGATTACAGGCGCGTAGGGATAGCGAAGGTCAGTGTCCC CTTCATCAAGACATATCCCAAGCCTACCCGTGTGGATTCCTTCTCGGGCCCGGAGATAGCCTTCAGAAAGGCGGAGTTTA AGGGCAAGACCGTAGTCAAGGATCGCTTCCTGCCATGGCACCACGGCTTCAGCCACTCCCTCACGATGGGCATAATAATC GGTATCGTCGTCTTTGCCTTCTTCAAGCTCATCGGCTACGCCCACGCGACCGAGCTTGCCCTCGCGGCGATGATAGGCCA GTGGCTCCACGTCTTCGAGGATCAGCTTGGCTTCATGGGCAGCAACCTGCTCCCGCCGATAACCAAGGACGTCATCCCTG GCTTCAAGCTCGGTGAGAGCGGAAGTGGTCTGACCAACTTCTCCACAGCCTGGCTCATGATAGCCTTCATGATATGGAAC TTCAACCGCTTCACAGACCCGAGGCCGATTCCAATAGCCGACTGGAAGCTGCTGCTACTCTTAGCATGGCCATCGATAAT AGGATTTGCCATAGCGATAGTCAAGAGCTTCAGGCTGAGGAAGGAGATATCCCAGCTAATGGACTACTACACCAACTTGG AGGCCTTCGAGGAGATGGAAGAGGTTGGAGGCATCTGA
Upstream 100 bases:
>100_bases AAGGAGTTACTGCCTCGGAGGCCTTATTCTTCCGGTGCTCATAAGTATGACGGGACACACGGGCGAAGTTATGCACCTGC TTGGCCTGGGGTGATGTAAA
Downstream 100 bases:
>100_bases GATTTTTATCTTTTCTCTGGCTTCTTCGCCACTACACCGAGCGCTTCCTCGGCCCTTCTAACACCAACGAAGCCTGCCTT TCTTAGGCGCTCCATCACGC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MRGFTHYISGLAAATFFPALVADLRMGILIPVIAAAAAYFPDFVDFKFGKFFSRRDYEIDPAPWDDKKHYAPKLVKVAEL NEKNRYQFFAVQGKVSEIVERGEDTLVFKMVDENGNVKTVEKPYKSIIFKLTDETGTITVEAFGEDYEFFEEEFGEIAFG KEMLVFGYVDVDDDGIKLVVSDAPHPQGIAETIAKAIEEAYEKGETIVKIHNIRLPGDVYRRFFIHLDPPKREVRVEMGP IVTPGGVAIGGEVPDYRRVGIAKVSVPFIKTYPKPTRVDSFSGPEIAFRKAEFKGKTVVKDRFLPWHHGFSHSLTMGIII GIVVFAFFKLIGYAHATELALAAMIGQWLHVFEDQLGFMGSNLLPPITKDVIPGFKLGESGSGLTNFSTAWLMIAFMIWN FNRFTDPRPIPIADWKLLLLLAWPSIIGFAIAIVKSFRLRKEISQLMDYYTNLEAFEEMEEVGGI
Sequences:
>Translated_465_residues MRGFTHYISGLAAATFFPALVADLRMGILIPVIAAAAAYFPDFVDFKFGKFFSRRDYEIDPAPWDDKKHYAPKLVKVAEL NEKNRYQFFAVQGKVSEIVERGEDTLVFKMVDENGNVKTVEKPYKSIIFKLTDETGTITVEAFGEDYEFFEEEFGEIAFG KEMLVFGYVDVDDDGIKLVVSDAPHPQGIAETIAKAIEEAYEKGETIVKIHNIRLPGDVYRRFFIHLDPPKREVRVEMGP IVTPGGVAIGGEVPDYRRVGIAKVSVPFIKTYPKPTRVDSFSGPEIAFRKAEFKGKTVVKDRFLPWHHGFSHSLTMGIII GIVVFAFFKLIGYAHATELALAAMIGQWLHVFEDQLGFMGSNLLPPITKDVIPGFKLGESGSGLTNFSTAWLMIAFMIWN FNRFTDPRPIPIADWKLLLLLAWPSIIGFAIAIVKSFRLRKEISQLMDYYTNLEAFEEMEEVGGI >Mature_465_residues MRGFTHYISGLAAATFFPALVADLRMGILIPVIAAAAAYFPDFVDFKFGKFFSRRDYEIDPAPWDDKKHYAPKLVKVAEL NEKNRYQFFAVQGKVSEIVERGEDTLVFKMVDENGNVKTVEKPYKSIIFKLTDETGTITVEAFGEDYEFFEEEFGEIAFG KEMLVFGYVDVDDDGIKLVVSDAPHPQGIAETIAKAIEEAYEKGETIVKIHNIRLPGDVYRRFFIHLDPPKREVRVEMGP IVTPGGVAIGGEVPDYRRVGIAKVSVPFIKTYPKPTRVDSFSGPEIAFRKAEFKGKTVVKDRFLPWHHGFSHSLTMGIII GIVVFAFFKLIGYAHATELALAAMIGQWLHVFEDQLGFMGSNLLPPITKDVIPGFKLGESGSGLTNFSTAWLMIAFMIWN FNRFTDPRPIPIADWKLLLLLAWPSIIGFAIAIVKSFRLRKEISQLMDYYTNLEAFEEMEEVGGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52401; Mature: 52401
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFTHYISGLAAATFFPALVADLRMGILIPVIAAAAAYFPDFVDFKFGKFFSRRDYEID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC PAPWDDKKHYAPKLVKVAELNEKNRYQFFAVQGKVSEIVERGEDTLVFKMVDENGNVKTV CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCEEEEEEECCCCCEEEH EKPYKSIIFKLTDETGTITVEAFGEDYEFFEEEFGEIAFGKEMLVFGYVDVDDDGIKLVV HHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHCCHHCCCEEEEEEEEEECCCCCEEEE SDAPHPQGIAETIAKAIEEAYEKGETIVKIHNIRLPGDVYRRFFIHLDPPKREVRVEMGP CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHEEEEECCCCCHHEEEEECC IVTPGGVAIGGEVPDYRRVGIAKVSVPFIKTYPKPTRVDSFSGPEIAFRKAEFKGKTVVK EECCCCEEECCCCCCHHHCCEEEEECCHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEHH DRFLPWHHGFSHSLTMGIIIGIVVFAFFKLIGYAHATELALAAMIGQWLHVFEDQLGFMG HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNLLPPITKDVIPGFKLGESGSGLTNFSTAWLMIAFMIWNFNRFTDPRPIPIADWKLLLL CCCCCCHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LAWPSIIGFAIAIVKSFRLRKEISQLMDYYTNLEAFEEMEEVGGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure MRGFTHYISGLAAATFFPALVADLRMGILIPVIAAAAAYFPDFVDFKFGKFFSRRDYEID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC PAPWDDKKHYAPKLVKVAELNEKNRYQFFAVQGKVSEIVERGEDTLVFKMVDENGNVKTV CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCEEEEEEECCCCCEEEH EKPYKSIIFKLTDETGTITVEAFGEDYEFFEEEFGEIAFGKEMLVFGYVDVDDDGIKLVV HHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHCCHHCCCEEEEEEEEEECCCCCEEEE SDAPHPQGIAETIAKAIEEAYEKGETIVKIHNIRLPGDVYRRFFIHLDPPKREVRVEMGP CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHEEEEECCCCCHHEEEEECC IVTPGGVAIGGEVPDYRRVGIAKVSVPFIKTYPKPTRVDSFSGPEIAFRKAEFKGKTVVK EECCCCEEECCCCCCHHHCCEEEEECCHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEHH DRFLPWHHGFSHSLTMGIIIGIVVFAFFKLIGYAHATELALAAMIGQWLHVFEDQLGFMG HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNLLPPITKDVIPGFKLGESGSGLTNFSTAWLMIAFMIWNFNRFTDPRPIPIADWKLLLL CCCCCCHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LAWPSIIGFAIAIVKSFRLRKEISQLMDYYTNLEAFEEMEEVGGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA