Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224692

Identifier: 212224692

GI number: 212224692

Start: 1413601

End: 1414923

Strand: Reverse

Name: 212224692

Synonym: TON_1541

Alternate gene names: NA

Gene position: 1414923-1413601 (Counterclockwise)

Preceding gene: 212224693

Following gene: 212224691

Centisome position: 76.58

GC content: 54.42

Gene sequence:

>1323_bases
ATGCTCCCCCTCTCGGATATTTTAATTTGGTCGCTGGCCGGAGTGCTCTTCGGCTCGCTTATATCATGGATTCCGGGATT
CCATATCTTCAACATCATGGCCCTGCTCGTGGCAGTCTTCGGGGTCGGCGAGCTCATGCCCGTCCAGGCCTTTCCATTCT
TTGCTATAGGGGCCATAGTAGCTTACGCCTACGTCAGTGCAATATCGAGCGTCTACTTCAGCGTTGCTGACGAAAGCGCC
GTCTTCCTGCTCTTCCCCACGCAGAGGTACCTCCTCCTTGGCAGAGGACATGAGGCGGTACTGCTGTACCTCATTGGCGC
GGTTGCTGGAACGCTTATACTGGTCATAGGCGCCCTCTTCATCTTCCCGAAGGTACTTCCGCCGATATACCAGGCGACCA
GTCCGTACATCACCTACTTCCTCACCGCCATAGTTCTTTTCATGTTCATGAGCGAGTGGCCCAAGGAAGGTGACAGGGGC
AAGACGCCGTTCCAGAGGCTCTGGATGGCTTGGAGGCAGATACTGGGTGGATTACTCGTCTTCTTACTCTCCGGAATCCT
TGGCTTCATCGTCATGAACACCAACCTCCTACCGACAACGAGCGCCTACACGAGGCTTACGCCCATGTTCATAGGCTTCT
TTGGGATGTCCTGGGTGCTGCTGAACATACTCTCCAATCCACCCATGCTGGAACAGGTGCCGGACGATAGAATTGAGAGC
AGTCCCTACAACATCGCTAAGGCCAGTTTTGGCGGTGCTCTTGGAGGAACAATAGCTGCCGTTTACCCGATAATCACTGG
AGGTATGGGAGCGCTCATAGCGGGTCACATGACGAGCCAGCGCGGTGACGATGCCTTCATAATCAGTCAAGGAGTTAACA
GGGTCATCTACTACGTCGGGGCCTTCACGCTGCTCTTCCTGCCCAACCTCAGGCTCACGAGGGGAGCGGCGGCATGGCTC
GTTAGCTCGATATACACTCCGAAGAGCTACTCCGAATACTTGGCGGCCGTAGGCGTCATACTACTCAGCGCGGGAATAAG
CTTCGTTTTCACCTACTACATCTCCAAGTTCCTTGCGAGGGGCTTCAACATCGTCCATATTAGGAAACTCTCTTACTTCG
TAGCAATAACGCTGGTTATCATCTCATACGTCCTCACCGGACCGATGGGGATAGTGGTGCTTCTCGTCTCAACGGCAATA
GGCATGATGGCGGCGGCCTTCAACACCAGAAGGAGTTACTGCCTCGGAGGCCTTATTCTTCCGGTGCTCATAAGTATGAC
GGGACACACGGGCGAAGTTATGCACCTGCTTGGCCTGGGGTGA

Upstream 100 bases:

>100_bases
CAGGTTGTCAGGATAGCAGGCTACGTTACCGAGTACAAGGGTACCATAGAGGTCGTCCCCTACATGAGTGACGCAATAAT
CGTCGAGTGAGGTGATGACC

Downstream 100 bases:

>100_bases
TGTAAAATGAGGGGCTTCACTCACTACATATCCGGTCTGGCGGCGGCGACCTTCTTCCCTGCTCTGGTCGCGGACTTGCG
GATGGGCATCCTCATTCCAG

Product: membrane protein, conserved

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MLPLSDILIWSLAGVLFGSLISWIPGFHIFNIMALLVAVFGVGELMPVQAFPFFAIGAIVAYAYVSAISSVYFSVADESA
VFLLFPTQRYLLLGRGHEAVLLYLIGAVAGTLILVIGALFIFPKVLPPIYQATSPYITYFLTAIVLFMFMSEWPKEGDRG
KTPFQRLWMAWRQILGGLLVFLLSGILGFIVMNTNLLPTTSAYTRLTPMFIGFFGMSWVLLNILSNPPMLEQVPDDRIES
SPYNIAKASFGGALGGTIAAVYPIITGGMGALIAGHMTSQRGDDAFIISQGVNRVIYYVGAFTLLFLPNLRLTRGAAAWL
VSSIYTPKSYSEYLAAVGVILLSAGISFVFTYYISKFLARGFNIVHIRKLSYFVAITLVIISYVLTGPMGIVVLLVSTAI
GMMAAAFNTRRSYCLGGLILPVLISMTGHTGEVMHLLGLG

Sequences:

>Translated_440_residues
MLPLSDILIWSLAGVLFGSLISWIPGFHIFNIMALLVAVFGVGELMPVQAFPFFAIGAIVAYAYVSAISSVYFSVADESA
VFLLFPTQRYLLLGRGHEAVLLYLIGAVAGTLILVIGALFIFPKVLPPIYQATSPYITYFLTAIVLFMFMSEWPKEGDRG
KTPFQRLWMAWRQILGGLLVFLLSGILGFIVMNTNLLPTTSAYTRLTPMFIGFFGMSWVLLNILSNPPMLEQVPDDRIES
SPYNIAKASFGGALGGTIAAVYPIITGGMGALIAGHMTSQRGDDAFIISQGVNRVIYYVGAFTLLFLPNLRLTRGAAAWL
VSSIYTPKSYSEYLAAVGVILLSAGISFVFTYYISKFLARGFNIVHIRKLSYFVAITLVIISYVLTGPMGIVVLLVSTAI
GMMAAAFNTRRSYCLGGLILPVLISMTGHTGEVMHLLGLG
>Mature_440_residues
MLPLSDILIWSLAGVLFGSLISWIPGFHIFNIMALLVAVFGVGELMPVQAFPFFAIGAIVAYAYVSAISSVYFSVADESA
VFLLFPTQRYLLLGRGHEAVLLYLIGAVAGTLILVIGALFIFPKVLPPIYQATSPYITYFLTAIVLFMFMSEWPKEGDRG
KTPFQRLWMAWRQILGGLLVFLLSGILGFIVMNTNLLPTTSAYTRLTPMFIGFFGMSWVLLNILSNPPMLEQVPDDRIES
SPYNIAKASFGGALGGTIAAVYPIITGGMGALIAGHMTSQRGDDAFIISQGVNRVIYYVGAFTLLFLPNLRLTRGAAAWL
VSSIYTPKSYSEYLAAVGVILLSAGISFVFTYYISKFLARGFNIVHIRKLSYFVAITLVIISYVLTGPMGIVVLLVSTAI
GMMAAAFNTRRSYCLGGLILPVLISMTGHTGEVMHLLGLG

Specific function: Unknown

COG id: COG1784

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 47825; Mature: 47825

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLSDILIWSLAGVLFGSLISWIPGFHIFNIMALLVAVFGVGELMPVQAFPFFAIGAIV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AYAYVSAISSVYFSVADESAVFLLFPTQRYLLLGRGHEAVLLYLIGAVAGTLILVIGALF
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
IFPKVLPPIYQATSPYITYFLTAIVLFMFMSEWPKEGDRGKTPFQRLWMAWRQILGGLLV
HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLLSGILGFIVMNTNLLPTTSAYTRLTPMFIGFFGMSWVLLNILSNPPMLEQVPDDRIES
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
SPYNIAKASFGGALGGTIAAVYPIITGGMGALIAGHMTSQRGDDAFIISQGVNRVIYYVG
CCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
AFTLLFLPNLRLTRGAAAWLVSSIYTPKSYSEYLAAVGVILLSAGISFVFTYYISKFLAR
HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFNIVHIRKLSYFVAITLVIISYVLTGPMGIVVLLVSTAIGMMAAAFNTRRSYCLGGLIL
CCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLISMTGHTGEVMHLLGLG
HHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MLPLSDILIWSLAGVLFGSLISWIPGFHIFNIMALLVAVFGVGELMPVQAFPFFAIGAIV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AYAYVSAISSVYFSVADESAVFLLFPTQRYLLLGRGHEAVLLYLIGAVAGTLILVIGALF
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
IFPKVLPPIYQATSPYITYFLTAIVLFMFMSEWPKEGDRGKTPFQRLWMAWRQILGGLLV
HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLLSGILGFIVMNTNLLPTTSAYTRLTPMFIGFFGMSWVLLNILSNPPMLEQVPDDRIES
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
SPYNIAKASFGGALGGTIAAVYPIITGGMGALIAGHMTSQRGDDAFIISQGVNRVIYYVG
CCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
AFTLLFLPNLRLTRGAAAWLVSSIYTPKSYSEYLAAVGVILLSAGISFVFTYYISKFLAR
HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFNIVHIRKLSYFVAITLVIISYVLTGPMGIVVLLVSTAIGMMAAAFNTRRSYCLGGLIL
CCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLISMTGHTGEVMHLLGLG
HHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]