| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224673
Identifier: 212224673
GI number: 212224673
Start: 1398035
End: 1399483
Strand: Reverse
Name: 212224673
Synonym: TON_1522
Alternate gene names: NA
Gene position: 1399483-1398035 (Counterclockwise)
Preceding gene: 212224676
Following gene: 212224670
Centisome position: 75.75
GC content: 55.56
Gene sequence:
>1449_bases ATGGAGCTGAAGAACTATCGCTTTCCCCCGCGTTACGGCCCCGAATGGGGCAGTGGTGGAATATTTGGCCTTAAATATTA CAACGGCGTGCTCTACTACACCTTGGCCTTCGAGGCCGAGGCTCACTTCGTGAGGGACGGCGAGGAAAAAACCTACGACT TTACCCTAGTCGGGGAAGGCCCCACGAGCGGAGGGGATACCTACAACGCCGTAACGGGAGTCGATGAGTTCATCTACTTC GGCGGCTGGGTTCACGCTCCGGCCGTTTACAAGAACCGTACCATAAGCTTCGTCAACAAATACTCCCACGTCCACGTTTA CGATACGGAAAACGACTCTATACGGCTCCTCTGGAAGGATTCAATCCACCATGAGACCGACTGGGCCGGGGAGATAAGCG ATATCATCTACGACCCATACGGTGATAGACTTCTGCTCGCGAGGGAGGACGGTCACGCCAACCTCGGCGTTTACTCTCTG GATAGGAGAACCGGCAGGGCGGAAGAACTGATAGGTGATCCTTCGCCGAAGGGAACCCTCGTCCATGATGTGGCGTTCTT TGGAATCGGCAACAACTTTACGGAGGGGTTGAGGGAGTTAAGGGCTCTTGATTTGATAACCGGGAAATGGAATACCTTCA AGCCCGGAAGCAGCGTCGACGGGAGGCCCTATATAAAGGCAGAGCTTGGAGCCATGGCTTCCGCTTACAACAGGGTCTTC GCCTTTGTTCGTGGGGGTCTCTTTGCCGGCAACCCGCTCATGGGAGAGGACCTCACATTCTTCAGGCTCTTTGACTTCTG CACCTTCTACGCGCCCTTCAGGGTGAACGCGATAAACGTGGGCGGTGGAATACTGACTGCTTTCAACGCCTATCACGACG CGGCTTATCTGCCATCTGACGAGTTCAACTGGATCACCACCAACACGGTGGCCGGCCCTAGCGTCCTGGTTTACATAGCC CCGCCGATGGTGAAAATCGTTGGGGCCTTCGGGGCACGGATAACGAGCATCGAGAAGGTGGATGGAAAAATACTCCTTGG TACCAACACCGCGCCCAATACCGGGGCAACCGAGGCCACCCCATTTGACACGGGGAACAGGGACATAGTCGTGCTCGACG AGAAGATTCTCCAGGACAGGCCCCCGGCGGTGAGCTTCTCCATACCCCTCGCCCTTCCGAGCATGGCAAGGAACTTCGGC GCAGGAACTTTTGGAGGAATTCCGCTTTATGGCTACACTGAGCCGAGGGCAGTCTTCTACGCCAGCTCTGACAACAAGCT CACCGTTTACGAGTACGACCTCTCGCTCCCCCCATCTGGGGCTTACGCAGAGACCTTCGAGCTGAGACGCGGAAAGAACG TCTTGGACTTAAGCTCCTTCAGCGGGATAGTGTCCTTCGAGCTTGAAAAAGAGGACATGAAGGGAAAAGTGAGAATAGAG CTCCGCTGA
Upstream 100 bases:
>100_bases ATCGCCAGCCCGCGATACATGGTTTCCCCTACGGCGCTGGGGTATAAAAGTCTCCCGAAAGTTCAATAAGAGGGAAGCTA TATTCAATCCCGGTGATATT
Downstream 100 bases:
>100_bases TTTCTTTTATCCTCTCAGGACTCCATCCTGCCGAGTATATTGCCCCAGGAGTGGCTGGACTCCAGGAGCTCCGCAACCGT TAGGTGTTCCTCCCTGACGA
Product: protein
Products: NA
Alternate protein names: Alpha-Glucosidase
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MELKNYRFPPRYGPEWGSGGIFGLKYYNGVLYYTLAFEAEAHFVRDGEEKTYDFTLVGEGPTSGGDTYNAVTGVDEFIYF GGWVHAPAVYKNRTISFVNKYSHVHVYDTENDSIRLLWKDSIHHETDWAGEISDIIYDPYGDRLLLAREDGHANLGVYSL DRRTGRAEELIGDPSPKGTLVHDVAFFGIGNNFTEGLRELRALDLITGKWNTFKPGSSVDGRPYIKAELGAMASAYNRVF AFVRGGLFAGNPLMGEDLTFFRLFDFCTFYAPFRVNAINVGGGILTAFNAYHDAAYLPSDEFNWITTNTVAGPSVLVYIA PPMVKIVGAFGARITSIEKVDGKILLGTNTAPNTGATEATPFDTGNRDIVVLDEKILQDRPPAVSFSIPLALPSMARNFG AGTFGGIPLYGYTEPRAVFYASSDNKLTVYEYDLSLPPSGAYAETFELRRGKNVLDLSSFSGIVSFELEKEDMKGKVRIE LR
Sequences:
>Translated_482_residues MELKNYRFPPRYGPEWGSGGIFGLKYYNGVLYYTLAFEAEAHFVRDGEEKTYDFTLVGEGPTSGGDTYNAVTGVDEFIYF GGWVHAPAVYKNRTISFVNKYSHVHVYDTENDSIRLLWKDSIHHETDWAGEISDIIYDPYGDRLLLAREDGHANLGVYSL DRRTGRAEELIGDPSPKGTLVHDVAFFGIGNNFTEGLRELRALDLITGKWNTFKPGSSVDGRPYIKAELGAMASAYNRVF AFVRGGLFAGNPLMGEDLTFFRLFDFCTFYAPFRVNAINVGGGILTAFNAYHDAAYLPSDEFNWITTNTVAGPSVLVYIA PPMVKIVGAFGARITSIEKVDGKILLGTNTAPNTGATEATPFDTGNRDIVVLDEKILQDRPPAVSFSIPLALPSMARNFG AGTFGGIPLYGYTEPRAVFYASSDNKLTVYEYDLSLPPSGAYAETFELRRGKNVLDLSSFSGIVSFELEKEDMKGKVRIE LR >Mature_482_residues MELKNYRFPPRYGPEWGSGGIFGLKYYNGVLYYTLAFEAEAHFVRDGEEKTYDFTLVGEGPTSGGDTYNAVTGVDEFIYF GGWVHAPAVYKNRTISFVNKYSHVHVYDTENDSIRLLWKDSIHHETDWAGEISDIIYDPYGDRLLLAREDGHANLGVYSL DRRTGRAEELIGDPSPKGTLVHDVAFFGIGNNFTEGLRELRALDLITGKWNTFKPGSSVDGRPYIKAELGAMASAYNRVF AFVRGGLFAGNPLMGEDLTFFRLFDFCTFYAPFRVNAINVGGGILTAFNAYHDAAYLPSDEFNWITTNTVAGPSVLVYIA PPMVKIVGAFGARITSIEKVDGKILLGTNTAPNTGATEATPFDTGNRDIVVLDEKILQDRPPAVSFSIPLALPSMARNFG AGTFGGIPLYGYTEPRAVFYASSDNKLTVYEYDLSLPPSGAYAETFELRRGKNVLDLSSFSGIVSFELEKEDMKGKVRIE LR
Specific function: Unknown
COG id: COG4697
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53309; Mature: 53309
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKNYRFPPRYGPEWGSGGIFGLKYYNGVLYYTLAFEAEAHFVRDGEEKTYDFTLVGEG CCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCEEEEECCCCCEEEEEEEECC PTSGGDTYNAVTGVDEFIYFGGWVHAPAVYKNRTISFVNKYSHVHVYDTENDSIRLLWKD CCCCCCCCCHHHCHHHHHEECCEEECCEEECCCEEEEEECCCEEEEEECCCCEEEEEEEC SIHHETDWAGEISDIIYDPYGDRLLLAREDGHANLGVYSLDRRTGRAEELIGDPSPKGTL CCCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHCCCCCCCCCE VHDVAFFGIGNNFTEGLRELRALDLITGKWNTFKPGSSVDGRPYIKAELGAMASAYNRVF EEEEEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH AFVRGGLFAGNPLMGEDLTFFRLFDFCTFYAPFRVNAINVGGGILTAFNAYHDAAYLPSD HHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEHHHCCCEECCCC EFNWITTNTVAGPSVLVYIAPPMVKIVGAFGARITSIEKVDGKILLGTNTAPNTGATEAT CCCEEEECCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCC PFDTGNRDIVVLDEKILQDRPPAVSFSIPLALPSMARNFGAGTFGGIPLYGYTEPRAVFY CCCCCCEEEEEEEHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCCCEEEE ASSDNKLTVYEYDLSLPPSGAYAETFELRRGKNVLDLSSFSGIVSFELEKEDMKGKVRIE ECCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCEEEEE LR EC >Mature Secondary Structure MELKNYRFPPRYGPEWGSGGIFGLKYYNGVLYYTLAFEAEAHFVRDGEEKTYDFTLVGEG CCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCEEEEECCCCCEEEEEEEECC PTSGGDTYNAVTGVDEFIYFGGWVHAPAVYKNRTISFVNKYSHVHVYDTENDSIRLLWKD CCCCCCCCCHHHCHHHHHEECCEEECCEEECCCEEEEEECCCEEEEEECCCCEEEEEEEC SIHHETDWAGEISDIIYDPYGDRLLLAREDGHANLGVYSLDRRTGRAEELIGDPSPKGTL CCCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHCCCCCCCCCE VHDVAFFGIGNNFTEGLRELRALDLITGKWNTFKPGSSVDGRPYIKAELGAMASAYNRVF EEEEEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH AFVRGGLFAGNPLMGEDLTFFRLFDFCTFYAPFRVNAINVGGGILTAFNAYHDAAYLPSD HHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEHHHCCCEECCCC EFNWITTNTVAGPSVLVYIAPPMVKIVGAFGARITSIEKVDGKILLGTNTAPNTGATEAT CCCEEEECCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCC PFDTGNRDIVVLDEKILQDRPPAVSFSIPLALPSMARNFGAGTFGGIPLYGYTEPRAVFY CCCCCCEEEEEEEHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCCCEEEE ASSDNKLTVYEYDLSLPPSGAYAETFELRRGKNVLDLSSFSGIVSFELEKEDMKGKVRIE ECCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCEEEEE LR EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA