| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224376
Identifier: 212224376
GI number: 212224376
Start: 1119842
End: 1120474
Strand: Reverse
Name: 212224376
Synonym: TON_1227
Alternate gene names: NA
Gene position: 1120474-1119842 (Counterclockwise)
Preceding gene: 212224377
Following gene: 212224374
Centisome position: 60.64
GC content: 52.45
Gene sequence:
>633_bases ATGAACCGTATATCTCGAAGGGAGCTGATAAGAAAGGCTTGGCATATCTCACCGGGAATACTTGGTGCTCCAATAATAGT CTTCACGCCAAGGTGGGTAACGCTCTTGGTGGTGTGGGGTTTAGCATTCCTCTACACTCTCCAGCATCTCAAGCTGAGGC GCGGCTGGAAATTCACGGTTCCGATAGCCGATATAAGCTACCGCCAGATGGCGAGGGAGGACGAAGTCGACAACTATCTG GGGAGCTTCCTCTTCTGGGTTACGATGGCAATGATATGTTCAATCTTTCCGAAGATAGCCGCCCTCTCGGCACTGTGGGT CTCGACCTTCGGCGACTGCTTCAATGCAATAATCGGCCAGGCGGTTGGTGGCCCGAAGATTCCGTGGAATAAAAGAAAGA CCATCATTGGAAGTGCCACAATGTTCGGTGTATCTCTGGTCATGCTGGTTTTTGCCCACAGAGTCCTTGGTATGCAGTAT TCCCTCCCGTTCCTGGGATTGGTGGCCATGATTGCGGTATTTCTGGAGAGCCTTCCCATCCCGTCGGCCTACGACGAGTT CACGGTTCCATTTGCAACTGCCCTCCTGATATGGCTCGCCTATGGTGGAGAACTGCTTGGTGTGACGTGGTGA
Upstream 100 bases:
>100_bases TCAAAACCGGCCCGACCGGAACGAACGTCAACTCGCTGGTGATAGCGGTGATTCCGTAGAAGATATAAATCCTTCTGCTG AACTCTAGAAGGGTGAAATC
Downstream 100 bases:
>100_bases TCATAGCGGGACGAACTCCCACCCCTTCCTGTGGGTCTCTACCCCTCCGCTCGAACCTTCAGCGCCTTTATCTCCTTTTT CAGCGCTCCTATGAAGCTCT
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNRISRRELIRKAWHISPGILGAPIIVFTPRWVTLLVVWGLAFLYTLQHLKLRRGWKFTVPIADISYRQMAREDEVDNYL GSFLFWVTMAMICSIFPKIAALSALWVSTFGDCFNAIIGQAVGGPKIPWNKRKTIIGSATMFGVSLVMLVFAHRVLGMQY SLPFLGLVAMIAVFLESLPIPSAYDEFTVPFATALLIWLAYGGELLGVTW
Sequences:
>Translated_210_residues MNRISRRELIRKAWHISPGILGAPIIVFTPRWVTLLVVWGLAFLYTLQHLKLRRGWKFTVPIADISYRQMAREDEVDNYL GSFLFWVTMAMICSIFPKIAALSALWVSTFGDCFNAIIGQAVGGPKIPWNKRKTIIGSATMFGVSLVMLVFAHRVLGMQY SLPFLGLVAMIAVFLESLPIPSAYDEFTVPFATALLIWLAYGGELLGVTW >Mature_210_residues MNRISRRELIRKAWHISPGILGAPIIVFTPRWVTLLVVWGLAFLYTLQHLKLRRGWKFTVPIADISYRQMAREDEVDNYL GSFLFWVTMAMICSIFPKIAALSALWVSTFGDCFNAIIGQAVGGPKIPWNKRKTIIGSATMFGVSLVMLVFAHRVLGMQY SLPFLGLVAMIAVFLESLPIPSAYDEFTVPFATALLIWLAYGGELLGVTW
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23601; Mature: 23601
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRISRRELIRKAWHISPGILGAPIIVFTPRWVTLLVVWGLAFLYTLQHLKLRRGWKFTV CCCCHHHHHHHHHHCCCCCCHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE PIADISYRQMAREDEVDNYLGSFLFWVTMAMICSIFPKIAALSALWVSTFGDCFNAIIGQ EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGGPKIPWNKRKTIIGSATMFGVSLVMLVFAHRVLGMQYSLPFLGLVAMIAVFLESLPI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC PSAYDEFTVPFATALLIWLAYGGELLGVTW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNRISRRELIRKAWHISPGILGAPIIVFTPRWVTLLVVWGLAFLYTLQHLKLRRGWKFTV CCCCHHHHHHHHHHCCCCCCHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE PIADISYRQMAREDEVDNYLGSFLFWVTMAMICSIFPKIAALSALWVSTFGDCFNAIIGQ EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGGPKIPWNKRKTIIGSATMFGVSLVMLVFAHRVLGMQYSLPFLGLVAMIAVFLESLPI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC PSAYDEFTVPFATALLIWLAYGGELLGVTW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA