Click here to switch to the map view.

The map label for this gene is flaB5 [H]

Identifier: 212224334

GI number: 212224334

Start: 1082302

End: 1083099

Strand: Reverse

Name: flaB5 [H]

Synonym: TON_1185

Alternate gene names: 212224334

Gene position: 1083099-1082302 (Counterclockwise)

Preceding gene: 212224335

Following gene: 212224333

Centisome position: 58.62

GC content: 56.89

Gene sequence:

>798_bases
ATGAGGCGCGGTGCCATTGGTATTGGGACGCTCATCGTGTTCATCGCAATGGTGCTGGTGGCTGCCGTTGCCGCTGGTGT
GCTCATAAGCACTTCTGGCTACCTCCAGCAGAAGGCGATGGCCACCGGCAGGCAAACGACCCAGGAGGTAGCGAGCGGCA
TCAAGGTGATGAACGTCTACGGCTACACCCCTGCTGACCCAGCCGGGAGCGGTAAGATAACTAGGATGGTGCTCTATGTC
TCCCCCAACGCCGGTTCTGGCGGCATAGACCTTGCCCACGTCAGGGTTGTCCTCAGCGACGGCAAGAGGATGGCCGTCTA
CAGGTATTACGATCCGAACGAGGATCCAGACCTTCAGGCAGACTACTTCATTTACTCCGGTGACGTGAGCAACGTGTTCG
CCGATGTTGGTGAGGACCCAGCAACAGGTGCTGTTGACGTCAGCACATATACCCCAACCACGGCCAGCGACATATCAATC
CTCTGGAAGAACCTGTACTACTACAATACGAATGCAGACGGTAATGGCCAAAGGATACTCTTTGGTATCATCGTCGTCAG
CGACGGCGACCAGAGCCTCAGCGGAAGCCCAGCGCACCCGACCCTCAGCTGGGGTGACATAGCAGCAATAGCCCTCTGGA
CGATACCGTTTGACGATGATGGTGACCCGACTACCGGCTACGGCCTTGGTCCAAGCACCAAGGTCACCGGTAAGGTCATA
CCCGAGAACGGTGCAGGTGGGGTTATAGACTTTACCACTCCAAGCACCTACACGGACAACCTGATGGAGCTGCAATGA

Upstream 100 bases:

>100_bases
GGTAAGGTCATACCCGAAGTCGGCGCCGCGGGAGTTATAGACTTCACCACCCCCGCGACGTACAACTACAATGTGATGGT
GCTCCAGTGAGGTGATTGCC

Downstream 100 bases:

>100_bases
GGGGGTGGCTTCCATGGCGCTGGACTTCCTCTCGTCTTTGTTCAAGAAGAAGCCAAAGGAAGAGGCCACCCCTCCGGAGG
AGCCCATTTTTGAAGAGGAA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRRGAIGIGTLIVFIAMVLVAAVAAGVLISTSGYLQQKAMATGRQTTQEVASGIKVMNVYGYTPADPAGSGKITRMVLYV
SPNAGSGGIDLAHVRVVLSDGKRMAVYRYYDPNEDPDLQADYFIYSGDVSNVFADVGEDPATGAVDVSTYTPTTASDISI
LWKNLYYYNTNADGNGQRILFGIIVVSDGDQSLSGSPAHPTLSWGDIAAIALWTIPFDDDGDPTTGYGLGPSTKVTGKVI
PENGAGGVIDFTTPSTYTDNLMELQ

Sequences:

>Translated_265_residues
MRRGAIGIGTLIVFIAMVLVAAVAAGVLISTSGYLQQKAMATGRQTTQEVASGIKVMNVYGYTPADPAGSGKITRMVLYV
SPNAGSGGIDLAHVRVVLSDGKRMAVYRYYDPNEDPDLQADYFIYSGDVSNVFADVGEDPATGAVDVSTYTPTTASDISI
LWKNLYYYNTNADGNGQRILFGIIVVSDGDQSLSGSPAHPTLSWGDIAAIALWTIPFDDDGDPTTGYGLGPSTKVTGKVI
PENGAGGVIDFTTPSTYTDNLMELQ
>Mature_265_residues
MRRGAIGIGTLIVFIAMVLVAAVAAGVLISTSGYLQQKAMATGRQTTQEVASGIKVMNVYGYTPADPAGSGKITRMVLYV
SPNAGSGGIDLAHVRVVLSDGKRMAVYRYYDPNEDPDLQADYFIYSGDVSNVFADVGEDPATGAVDVSTYTPTTASDISI
LWKNLYYYNTNADGNGQRILFGIIVVSDGDQSLSGSPAHPTLSWGDIAAIALWTIPFDDDGDPTTGYGLGPSTKVTGKVI
PENGAGGVIDFTTPSTYTDNLMELQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella [H]

COG id: COG1681

COG function: function code N; Archaeal flagellins

Gene ontology:

Cell location: Archaeal flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013373
- InterPro:   IPR002774 [H]

Pfam domain/function: PF01917 Arch_flagellin [H]

EC number: NA

Molecular weight: Translated: 27929; Mature: 27929

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGAIGIGTLIVFIAMVLVAAVAAGVLISTSGYLQQKAMATGRQTTQEVASGIKVMNVY
CCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCHHHHHHHCCEEEEEEE
GYTPADPAGSGKITRMVLYVSPNAGSGGIDLAHVRVVLSDGKRMAVYRYYDPNEDPDLQA
CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCCCCCE
DYFIYSGDVSNVFADVGEDPATGAVDVSTYTPTTASDISILWKNLYYYNTNADGNGQRIL
EEEEEECCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHEEEEEEEEECCCCCCCCEEE
FGIIVVSDGDQSLSGSPAHPTLSWGDIAAIALWTIPFDDDGDPTTGYGLGPSTKVTGKVI
EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
PENGAGGVIDFTTPSTYTDNLMELQ
CCCCCCCEEEECCCCCCCCCEEECC
>Mature Secondary Structure
MRRGAIGIGTLIVFIAMVLVAAVAAGVLISTSGYLQQKAMATGRQTTQEVASGIKVMNVY
CCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCHHHHHHHCCEEEEEEE
GYTPADPAGSGKITRMVLYVSPNAGSGGIDLAHVRVVLSDGKRMAVYRYYDPNEDPDLQA
CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCCCCCE
DYFIYSGDVSNVFADVGEDPATGAVDVSTYTPTTASDISILWKNLYYYNTNADGNGQRIL
EEEEEECCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHEEEEEEEEECCCCCCCCEEE
FGIIVVSDGDQSLSGSPAHPTLSWGDIAAIALWTIPFDDDGDPTTGYGLGPSTKVTGKVI
EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
PENGAGGVIDFTTPSTYTDNLMELQ
CCCCCCCEEEECCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]