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The map label for this gene is flaC [H]

Identifier: 212224333

GI number: 212224333

Start: 1081812

End: 1082288

Strand: Reverse

Name: flaC [H]

Synonym: TON_1184

Alternate gene names: 212224333

Gene position: 1082288-1081812 (Counterclockwise)

Preceding gene: 212224334

Following gene: 212224332

Centisome position: 58.58

GC content: 48.22

Gene sequence:

>477_bases
ATGGCGCTGGACTTCCTCTCGTCTTTGTTCAAGAAGAAGCCAAAGGAAGAGGCCACCCCTCCGGAGGAGCCCATTTTTGA
AGAGGAACTAGAAGAGCGTGTCGAACACAGGGAGGAAAACGAGCAGATAAGACAACTCATGGAGCGCATCAATGAGATCG
AGAACGACATCCCAAGGATAAAGATAAGCATAGACACGATAAAGAAGCAGATGCAGGAACTCCGCGACGACATCGACAGG
CTTGACAAGACCATTAAGGACGTCATGATGCTCTATGAGGTTATCAGCCAGGAGATAAATCCATTTAAGGACCAGATGGG
ACAGGAGAACCCACTCACCAATGAGATACAGGATCTCAGGAAAGAACTGGAAGACCTAAAGCTTGAGATCGCTCAGATAA
AAAACGACATCAAGGTGCTTGCGGGATATGGGGTTGACCTCGATTCGATAATCTACGAGGTGCTTGCGGAGGTGTGA

Upstream 100 bases:

>100_bases
AAGGTCATACCCGAGAACGGTGCAGGTGGGGTTATAGACTTTACCACTCCAAGCACCTACACGGACAACCTGATGGAGCT
GCAATGAGGGGGTGGCTTCC

Downstream 100 bases:

>100_bases
CGCGTGGAGATTAGCAGGCTCGTTACAGAGGCTGACATCAACGCCAAGCTCGCGGAGCTCAAGGGCAAGGTTCCAACAGT
CGTCATCAACGACCTCCGCG

Product: flagella-related protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MALDFLSSLFKKKPKEEATPPEEPIFEEELEERVEHREENEQIRQLMERINEIENDIPRIKISIDTIKKQMQELRDDIDR
LDKTIKDVMMLYEVISQEINPFKDQMGQENPLTNEIQDLRKELEDLKLEIAQIKNDIKVLAGYGVDLDSIIYEVLAEV

Sequences:

>Translated_158_residues
MALDFLSSLFKKKPKEEATPPEEPIFEEELEERVEHREENEQIRQLMERINEIENDIPRIKISIDTIKKQMQELRDDIDR
LDKTIKDVMMLYEVISQEINPFKDQMGQENPLTNEIQDLRKELEDLKLEIAQIKNDIKVLAGYGVDLDSIIYEVLAEV
>Mature_157_residues
ALDFLSSLFKKKPKEEATPPEEPIFEEELEERVEHREENEQIRQLMERINEIENDIPRIKISIDTIKKQMQELRDDIDRL
DKTIKDVMMLYEVISQEINPFKDQMGQENPLTNEIQDLRKELEDLKLEIAQIKNDIKVLAGYGVDLDSIIYEVLAEV

Specific function: Unknown

COG id: COG3352

COG function: function code N; Putative archaeal flagellar protein C

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009205
- InterPro:   IPR008039 [H]

Pfam domain/function: PF05377 FlaC_arch [H]

EC number: NA

Molecular weight: Translated: 18686; Mature: 18554

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDFLSSLFKKKPKEEATPPEEPIFEEELEERVEHREENEQIRQLMERINEIENDIPRI
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KISIDTIKKQMQELRDDIDRLDKTIKDVMMLYEVISQEINPFKDQMGQENPLTNEIQDLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHH
KELEDLKLEIAQIKNDIKVLAGYGVDLDSIIYEVLAEV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ALDFLSSLFKKKPKEEATPPEEPIFEEELEERVEHREENEQIRQLMERINEIENDIPRI
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KISIDTIKKQMQELRDDIDRLDKTIKDVMMLYEVISQEINPFKDQMGQENPLTNEIQDLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHH
KELEDLKLEIAQIKNDIKVLAGYGVDLDSIIYEVLAEV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA