Click here to switch to the map view.

The map label for this gene is flaE [H]

Identifier: 212224332

GI number: 212224332

Start: 1080477

End: 1081808

Strand: Reverse

Name: flaE [H]

Synonym: TON_1183

Alternate gene names: 212224332

Gene position: 1081808-1080477 (Counterclockwise)

Preceding gene: 212224333

Following gene: 212224331

Centisome position: 58.55

GC content: 54.2

Gene sequence:

>1332_bases
GTGGAGATTAGCAGGCTCGTTACAGAGGCTGACATCAACGCCAAGCTCGCGGAGCTCAAGGGCAAGGTTCCAACAGTCGT
CATCAACGACCTCCGCGAGAAGCTCATAGCACGCAAGGACAACCTCACTTACGACCAGCTTGAGAAGATAATCCAGAAAG
TCCTTGACACCTATGGAAGCCAGGCCACAAAGTACGAACAGCTCAACAAACGCGTTGATGAACTAGGCAAGAGGCTCACC
GATCTGAGCCTTCAGTTGAGCAGGCTCGTTGAGACTCTCGAATCTGCGAAGTTCGATGTTCAAGAGAAGAAGGCTGAGAA
GGTCTCCCAGAAAGTCGACGAAGTCCACGAGAAGATCGGGAAGCTTGAGGAACTCCTCGAAGGGGAGGAGAAAGAGGAAG
TTCCTGAGGAACTCACCGAAAAGCTCGAGGAGCTCCACAGAAAGGTCGATGAGATTGCCGAGAAGGTCGAGGTTCAGACG
GCAGCCGAGAAACTTGAAGAAGCCCAGGAGAAGCTGGAGGAGCTTCAGGCCAAGATAGAGGCCGGCGAAGAAATCAGTGA
GGAGGAGCTTGCGGCCGCCGAACAGGCGGTTGCCGAGGCCCAAGCTGCAGCAGAGGAAGCCCCGGTGGAAGAAATAAGGG
GCGTTGAGGAGGTAGAGGCTCCCACTGAAGAGACTGCCCCTGAGGAAGTTGAAGAGACTGAGGAAGTCCCAGGGGTGGAA
GAAGTCGAGGTGCTTCCGGAAGAGATTGGAAACGTGGAGGAACTTCCCGAAGAGGCTCCGCAGGAAGGAATTGTTGGGGA
AGTTGAGGCCGTCCCCGAGGTAGCCGAGGAAGTTTCGATTGAAGAGGTTCCCGCTCATGAGGTTAAACCTGAGGAAATCA
AAAGGGAGGAAGGTGGTGTTGAGATGGCTGAGAAGATCCAGATCCCGGAGGACATCGCAAGCCTGCTCTTTGAGGAGGAG
CCAAAGAAGGCACGCCTTGAAAAGCTCCCCGAGGACATCGTTTCCACCATGATAGCCCTTAAGTGGCTCGGATTCCTCAT
CGACAGGGTTGGTATCCAGAACCTTGAGAGAGTGCTTGAGTTTTACTATGAGATAGGCTGGATAAGTGAGGAAGTGCTCA
ACCAGCTCCTGCGCTATGCCAAGGGTACCAGGCCGCACCACAGGGACCCCGAGTGGAAGCCGGCCGAGAAGCTCACCGTC
CAGGATCACCTCATAAGCTTGCTCTTCCTCGAGAGGCTCAGAGGACTCAAGATAAACAGGAACGTCCTAGACAAGCTTGA
GCGCGAAATCAAGATGCTCGAAAAGACCCTCGACGAGTTTTACGGTATCTGA

Upstream 100 bases:

>100_bases
GCTTGAGATCGCTCAGATAAAAAACGACATCAAGGTGCTTGCGGGATATGGGGTTGACCTCGATTCGATAATCTACGAGG
TGCTTGCGGAGGTGTGACGC

Downstream 100 bases:

>100_bases
GGTGCAGGACTTCGGGGAGAGGGGGGCGGCCTATGGGATTCAGCGTATCAGCGAGTACGGCCATAATCTTTATTTCTTTT
TTAATAGCCGCCAGCACCCT

Product: flagella-related protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MEISRLVTEADINAKLAELKGKVPTVVINDLREKLIARKDNLTYDQLEKIIQKVLDTYGSQATKYEQLNKRVDELGKRLT
DLSLQLSRLVETLESAKFDVQEKKAEKVSQKVDEVHEKIGKLEELLEGEEKEEVPEELTEKLEELHRKVDEIAEKVEVQT
AAEKLEEAQEKLEELQAKIEAGEEISEEELAAAEQAVAEAQAAAEEAPVEEIRGVEEVEAPTEETAPEEVEETEEVPGVE
EVEVLPEEIGNVEELPEEAPQEGIVGEVEAVPEVAEEVSIEEVPAHEVKPEEIKREEGGVEMAEKIQIPEDIASLLFEEE
PKKARLEKLPEDIVSTMIALKWLGFLIDRVGIQNLERVLEFYYEIGWISEEVLNQLLRYAKGTRPHHRDPEWKPAEKLTV
QDHLISLLFLERLRGLKINRNVLDKLEREIKMLEKTLDEFYGI

Sequences:

>Translated_443_residues
MEISRLVTEADINAKLAELKGKVPTVVINDLREKLIARKDNLTYDQLEKIIQKVLDTYGSQATKYEQLNKRVDELGKRLT
DLSLQLSRLVETLESAKFDVQEKKAEKVSQKVDEVHEKIGKLEELLEGEEKEEVPEELTEKLEELHRKVDEIAEKVEVQT
AAEKLEEAQEKLEELQAKIEAGEEISEEELAAAEQAVAEAQAAAEEAPVEEIRGVEEVEAPTEETAPEEVEETEEVPGVE
EVEVLPEEIGNVEELPEEAPQEGIVGEVEAVPEVAEEVSIEEVPAHEVKPEEIKREEGGVEMAEKIQIPEDIASLLFEEE
PKKARLEKLPEDIVSTMIALKWLGFLIDRVGIQNLERVLEFYYEIGWISEEVLNQLLRYAKGTRPHHRDPEWKPAEKLTV
QDHLISLLFLERLRGLKINRNVLDKLEREIKMLEKTLDEFYGI
>Mature_443_residues
MEISRLVTEADINAKLAELKGKVPTVVINDLREKLIARKDNLTYDQLEKIIQKVLDTYGSQATKYEQLNKRVDELGKRLT
DLSLQLSRLVETLESAKFDVQEKKAEKVSQKVDEVHEKIGKLEELLEGEEKEEVPEELTEKLEELHRKVDEIAEKVEVQT
AAEKLEEAQEKLEELQAKIEAGEEISEEELAAAEQAVAEAQAAAEEAPVEEIRGVEEVEAPTEETAPEEVEETEEVPGVE
EVEVLPEEIGNVEELPEEAPQEGIVGEVEAVPEVAEEVSIEEVPAHEVKPEEIKREEGGVEMAEKIQIPEDIASLLFEEE
PKKARLEKLPEDIVSTMIALKWLGFLIDRVGIQNLERVLEFYYEIGWISEEVLNQLLRYAKGTRPHHRDPEWKPAEKLTV
QDHLISLLFLERLRGLKINRNVLDKLEREIKMLEKTLDEFYGI

Specific function: Unknown

COG id: COG3351

COG function: function code N; Putative archaeal flagellar protein D/E

Gene ontology:

Cell location: Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii flaE, also to flaD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006752
- ProDom:   PD012942 [H]

Pfam domain/function: PF04659 Arch_fla_DE [H]

EC number: NA

Molecular weight: Translated: 50521; Mature: 50521

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISRLVTEADINAKLAELKGKVPTVVINDLREKLIARKDNLTYDQLEKIIQKVLDTYGS
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
QATKYEQLNKRVDELGKRLTDLSLQLSRLVETLESAKFDVQEKKAEKVSQKVDEVHEKIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KLEELLEGEEKEEVPEELTEKLEELHRKVDEIAEKVEVQTAAEKLEEAQEKLEELQAKIE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGEEISEEELAAAEQAVAEAQAAAEEAPVEEIRGVEEVEAPTEETAPEEVEETEEVPGVE
HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCHH
EVEVLPEEIGNVEELPEEAPQEGIVGEVEAVPEVAEEVSIEEVPAHEVKPEEIKREEGGV
HHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCH
EMAEKIQIPEDIASLLFEEEPKKARLEKLPEDIVSTMIALKWLGFLIDRVGIQNLERVLE
HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYYEIGWISEEVLNQLLRYAKGTRPHHRDPEWKPAEKLTVQDHLISLLFLERLRGLKINR
HHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
NVLDKLEREIKMLEKTLDEFYGI
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEISRLVTEADINAKLAELKGKVPTVVINDLREKLIARKDNLTYDQLEKIIQKVLDTYGS
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
QATKYEQLNKRVDELGKRLTDLSLQLSRLVETLESAKFDVQEKKAEKVSQKVDEVHEKIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KLEELLEGEEKEEVPEELTEKLEELHRKVDEIAEKVEVQTAAEKLEEAQEKLEELQAKIE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGEEISEEELAAAEQAVAEAQAAAEEAPVEEIRGVEEVEAPTEETAPEEVEETEEVPGVE
HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCHH
EVEVLPEEIGNVEELPEEAPQEGIVGEVEAVPEVAEEVSIEEVPAHEVKPEEIKREEGGV
HHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCH
EMAEKIQIPEDIASLLFEEEPKKARLEKLPEDIVSTMIALKWLGFLIDRVGIQNLERVLE
HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYYEIGWISEEVLNQLLRYAKGTRPHHRDPEWKPAEKLTVQDHLISLLFLERLRGLKINR
HHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
NVLDKLEREIKMLEKTLDEFYGI
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA