| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224195
Identifier: 212224195
GI number: 212224195
Start: 967408
End: 968217
Strand: Reverse
Name: 212224195
Synonym: TON_1046
Alternate gene names: NA
Gene position: 968217-967408 (Counterclockwise)
Preceding gene: 212224198
Following gene: 212224194
Centisome position: 52.4
GC content: 50.0
Gene sequence:
>810_bases ATGGGTCTCTACGAGTTCTTTTACAGGTACTTCATCGAGCCTATAATCAACAACGAGGGCTACAACATCGTCAACACATT CGTTTATGCAATAATCCTTGGAATAGCCGTCCTCCTGCTGTACAGGCTCCTGAAGAAGATGGGGATAAAAATAGACGAGC ACTTTTTCAAGGCGCTGATTCCGTACATGATCCTCGGCCCGCTTATGAGGGCGATGACAGATGTGGGAATCCTCCCAAGG ACGTACTTGACAGTCAGTCCAGGCGGCTACTTCGTCATCGCAGCCTTTGCCCTCGCTTCCCTCTACGTCGTCTGGCGGCA CGTTGGGTCAGGGGAGAAGTTTTACCCCCTCTACCGCGATTTCGGATACGTCCTCCTTGGTGGACTGGTCTTTATACTGC TGATAAACCTAGACAAGGTCAACTTCAGGTGGGAGGTCTTCAAGTACTTCGTGCCAATTCTTATCGCCGCGGAAGCATTC ATATGGGTGCTCTCGAAAAAGGTCAAGCTTGTGGGAGACAACTCGCTTCTCTTTTACACCCACTTCTACGACGCGACCAC TACCTTCGTGGGAATTCAGTTCTTCGGTTTCTGGGAGCAACACGTTTTAGCCAGAAAACTCATGGAGTTCTCCGGTACTC CCGCGGTGATTTATCCCGAGAAGCTCCTAATACTGCTCCCAATAGTCTGGATACTCGACAGGGAGATGAAGGATGAAGAT CCGGAGCTGATAAACTTCGTCAAGCTCGCAATGTTCATACTTGGCTTTGGACCCGGGACTAGGAATCTGTTGATAACCCT GATGGGGTGA
Upstream 100 bases:
>100_bases TTCCCGCGGCAGCTGCATTAAGTGCATCCCCATCACCGTCCGTAGGAACTATAGTGGGAAAAGCTTTAAGGCTATCGGAA CAACCGTCTATGGTGGTCGA
Downstream 100 bases:
>100_bases TACGTATGGAAAAATTTGGTGAGATCTCCTGGAACGAAGTGGCCATTGAGATGGCCAAGGAAGTTGAGAAGGTTGTAATG CCCCTCTTTGGAACCCCAAA
Product: membrane protein, conserved
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MGLYEFFYRYFIEPIINNEGYNIVNTFVYAIILGIAVLLLYRLLKKMGIKIDEHFFKALIPYMILGPLMRAMTDVGILPR TYLTVSPGGYFVIAAFALASLYVVWRHVGSGEKFYPLYRDFGYVLLGGLVFILLINLDKVNFRWEVFKYFVPILIAAEAF IWVLSKKVKLVGDNSLLFYTHFYDATTTFVGIQFFGFWEQHVLARKLMEFSGTPAVIYPEKLLILLPIVWILDREMKDED PELINFVKLAMFILGFGPGTRNLLITLMG
Sequences:
>Translated_269_residues MGLYEFFYRYFIEPIINNEGYNIVNTFVYAIILGIAVLLLYRLLKKMGIKIDEHFFKALIPYMILGPLMRAMTDVGILPR TYLTVSPGGYFVIAAFALASLYVVWRHVGSGEKFYPLYRDFGYVLLGGLVFILLINLDKVNFRWEVFKYFVPILIAAEAF IWVLSKKVKLVGDNSLLFYTHFYDATTTFVGIQFFGFWEQHVLARKLMEFSGTPAVIYPEKLLILLPIVWILDREMKDED PELINFVKLAMFILGFGPGTRNLLITLMG >Mature_268_residues GLYEFFYRYFIEPIINNEGYNIVNTFVYAIILGIAVLLLYRLLKKMGIKIDEHFFKALIPYMILGPLMRAMTDVGILPRT YLTVSPGGYFVIAAFALASLYVVWRHVGSGEKFYPLYRDFGYVLLGGLVFILLINLDKVNFRWEVFKYFVPILIAAEAFI WVLSKKVKLVGDNSLLFYTHFYDATTTFVGIQFFGFWEQHVLARKLMEFSGTPAVIYPEKLLILLPIVWILDREMKDEDP ELINFVKLAMFILGFGPGTRNLLITLMG
Specific function: Unknown
COG id: COG1967
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002749 [H]
Pfam domain/function: PF01889 DUF63 [H]
EC number: NA
Molecular weight: Translated: 31087; Mature: 30955
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLYEFFYRYFIEPIINNEGYNIVNTFVYAIILGIAVLLLYRLLKKMGIKIDEHFFKALI CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH PYMILGPLMRAMTDVGILPRTYLTVSPGGYFVIAAFALASLYVVWRHVGSGEKFYPLYRD HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH FGYVLLGGLVFILLINLDKVNFRWEVFKYFVPILIAAEAFIWVLSKKVKLVGDNSLLFYT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEE HFYDATTTFVGIQFFGFWEQHVLARKLMEFSGTPAVIYPEKLLILLPIVWILDREMKDED EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCCCCC PELINFVKLAMFILGFGPGTRNLLITLMG HHHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure GLYEFFYRYFIEPIINNEGYNIVNTFVYAIILGIAVLLLYRLLKKMGIKIDEHFFKALI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH PYMILGPLMRAMTDVGILPRTYLTVSPGGYFVIAAFALASLYVVWRHVGSGEKFYPLYRD HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH FGYVLLGGLVFILLINLDKVNFRWEVFKYFVPILIAAEAFIWVLSKKVKLVGDNSLLFYT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEE HFYDATTTFVGIQFFGFWEQHVLARKLMEFSGTPAVIYPEKLLILLPIVWILDREMKDED EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCCCCC PELINFVKLAMFILGFGPGTRNLLITLMG HHHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]