| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224192
Identifier: 212224192
GI number: 212224192
Start: 964335
End: 965516
Strand: Reverse
Name: 212224192
Synonym: TON_1043
Alternate gene names: NA
Gene position: 965516-964335 (Counterclockwise)
Preceding gene: 212224193
Following gene: 212224190
Centisome position: 52.26
GC content: 51.52
Gene sequence:
>1182_bases ATGATGAGAAGGGCAGTCTTCGCGCTGGTAATCGTGCTCATGGTGTTCGTTTCAGGATGTATCACTGTAGTTCAGCAGAC CGAAACTTCGTCTTCCACGTATTCCCCAACAACTTCTACCTGGAGCACGCCCGCTCCGACCACCACTACAACCACAACAA CGTCTCCTGCGACATGGACGAATCCCGAAGTTCAGTGGGGCAACTTAACCGTTCTCCTGCCAAGTCAGGATGCCCAGTTG AACTGCTCAGGGATACTCTGGCGCTACATACTCAAAGACGCCCTTCCCTGCATGCTGAGCAGGCCGGAGCTTGAGGTTAT CTCCCCACTCGCGGAGAAGCTTAAAGGCGAAAATTTAGTCCAGAGTGCCTGGAACGTCCTTGACTGGGAAGATCAATGGA TAATCTACGACCGAGAGAAGGCCAAAGAGCCTTTTGCCAAGGTTATCATTTACCCTGACGGAAGACAGGAAGTTGTTGAG GGACAGAACAACACGATACAGACTCCCTATGAGACGATTATGAGGGGAAAGGGCATATGCACTGACTACACTGTTCTCAC CGACGCCCTGCTCTTGGCCATGAACTACACCCCCGTTTACGCGATGGCGATAAACCTTACCGACCTTGGCCATGCGGCGG CACTTGTAAGGATAGACGGCTGGTTCTTCGTCCTTGACCAGCATCTGCCCCCGATGGATCTCGGCTCCTACTATCGCTAC TGGAAGAGGCATGGGAGCATAATAATCAACGCAACGCTTTACGAGATAATGCTAGGAGAGAACCTTGCTGAAGTGAAGAC CCTCGGGGTCTTGAGTGGAAAAGACTTTCTCATACAGGACTACACCATGACGGAGAACGACGCAAAGGCTCTGGCTTATG GTATGCTGAACCTACTTGCCCAAGATTTTGGAATTGGCGCCGATAATTCTCTCTCGCTTATCTCCGAGGGCAAGCTTCCG GAAGGTTACAAGGCCGGCTGGATGTGGAGCACGACCTTCTACAATCTGGCCGATTACTATCATCCCATATTCTACGAACA GTATGTGAAGTGGCTCCTCGAAAGGATGACACTGGATTCAGAAACTGTAGAACACCTTGAAAAGAGTGCTTCAGCGTGGA TAGAAGTGGGGATTGAGGGCAACGACCTCGTTGTCACCCTCTACCTCGGCCAGCGTCAGTAG
Upstream 100 bases:
>100_bases CAGTTAGAAAACTTTGATCAAACTTTGCCTGCAAAGTTTACTGGCGCAGAGGTTGCTCCATGAAGGTTTCCTTTATAACT TTCACTGACGATTTTATGTC
Downstream 100 bases:
>100_bases CGCCTTGAATAGCCGCGGGAGTAGTCTCTTCTTCCGTTTTTCCGGTATCTCTGTGGTCTCTCCTCGCGCTTGTACCTCTC ATGGTACTCCCTAGGTAGCT
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MMRRAVFALVIVLMVFVSGCITVVQQTETSSSTYSPTTSTWSTPAPTTTTTTTTSPATWTNPEVQWGNLTVLLPSQDAQL NCSGILWRYILKDALPCMLSRPELEVISPLAEKLKGENLVQSAWNVLDWEDQWIIYDREKAKEPFAKVIIYPDGRQEVVE GQNNTIQTPYETIMRGKGICTDYTVLTDALLLAMNYTPVYAMAINLTDLGHAAALVRIDGWFFVLDQHLPPMDLGSYYRY WKRHGSIIINATLYEIMLGENLAEVKTLGVLSGKDFLIQDYTMTENDAKALAYGMLNLLAQDFGIGADNSLSLISEGKLP EGYKAGWMWSTTFYNLADYYHPIFYEQYVKWLLERMTLDSETVEHLEKSASAWIEVGIEGNDLVVTLYLGQRQ
Sequences:
>Translated_393_residues MMRRAVFALVIVLMVFVSGCITVVQQTETSSSTYSPTTSTWSTPAPTTTTTTTTSPATWTNPEVQWGNLTVLLPSQDAQL NCSGILWRYILKDALPCMLSRPELEVISPLAEKLKGENLVQSAWNVLDWEDQWIIYDREKAKEPFAKVIIYPDGRQEVVE GQNNTIQTPYETIMRGKGICTDYTVLTDALLLAMNYTPVYAMAINLTDLGHAAALVRIDGWFFVLDQHLPPMDLGSYYRY WKRHGSIIINATLYEIMLGENLAEVKTLGVLSGKDFLIQDYTMTENDAKALAYGMLNLLAQDFGIGADNSLSLISEGKLP EGYKAGWMWSTTFYNLADYYHPIFYEQYVKWLLERMTLDSETVEHLEKSASAWIEVGIEGNDLVVTLYLGQRQ >Mature_393_residues MMRRAVFALVIVLMVFVSGCITVVQQTETSSSTYSPTTSTWSTPAPTTTTTTTTSPATWTNPEVQWGNLTVLLPSQDAQL NCSGILWRYILKDALPCMLSRPELEVISPLAEKLKGENLVQSAWNVLDWEDQWIIYDREKAKEPFAKVIIYPDGRQEVVE GQNNTIQTPYETIMRGKGICTDYTVLTDALLLAMNYTPVYAMAINLTDLGHAAALVRIDGWFFVLDQHLPPMDLGSYYRY WKRHGSIIINATLYEIMLGENLAEVKTLGVLSGKDFLIQDYTMTENDAKALAYGMLNLLAQDFGIGADNSLSLISEGKLP EGYKAGWMWSTTFYNLADYYHPIFYEQYVKWLLERMTLDSETVEHLEKSASAWIEVGIEGNDLVVTLYLGQRQ
Specific function: Unknown
COG id: COG1800
COG function: function code R; Predicted transglutaminase-like proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0252 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007562 [H]
Pfam domain/function: PF04473 DUF553 [H]
EC number: NA
Molecular weight: Translated: 44348; Mature: 44348
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRAVFALVIVLMVFVSGCITVVQQTETSSSTYSPTTSTWSTPAPTTTTTTTTSPATWT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC NPEVQWGNLTVLLPSQDAQLNCSGILWRYILKDALPCMLSRPELEVISPLAEKLKGENLV CCCEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHH QSAWNVLDWEDQWIIYDREKAKEPFAKVIIYPDGRQEVVEGQNNTIQTPYETIMRGKGIC HHHHCCCCCCCCEEEEECHHCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHHCCCCCC TDYTVLTDALLLAMNYTPVYAMAINLTDLGHAAALVRIDGWFFVLDQHLPPMDLGSYYRY CHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHH WKRHGSIIINATLYEIMLGENLAEVKTLGVLSGKDFLIQDYTMTENDAKALAYGMLNLLA HHHCCCEEEEHHHHHHHHCCCHHHHHHHEEECCCCEEEEEEEECCCHHHHHHHHHHHHHH QDFGIGADNSLSLISEGKLPEGYKAGWMWSTTFYNLADYYHPIFYEQYVKWLLERMTLDS HHHCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ETVEHLEKSASAWIEVGIEGNDLVVTLYLGQRQ HHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC >Mature Secondary Structure MMRRAVFALVIVLMVFVSGCITVVQQTETSSSTYSPTTSTWSTPAPTTTTTTTTSPATWT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC NPEVQWGNLTVLLPSQDAQLNCSGILWRYILKDALPCMLSRPELEVISPLAEKLKGENLV CCCEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHH QSAWNVLDWEDQWIIYDREKAKEPFAKVIIYPDGRQEVVEGQNNTIQTPYETIMRGKGIC HHHHCCCCCCCCEEEEECHHCCCCCEEEEECCCCHHHHHCCCCCCCCCHHHHHHCCCCCC TDYTVLTDALLLAMNYTPVYAMAINLTDLGHAAALVRIDGWFFVLDQHLPPMDLGSYYRY CHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHH WKRHGSIIINATLYEIMLGENLAEVKTLGVLSGKDFLIQDYTMTENDAKALAYGMLNLLA HHHCCCEEEEHHHHHHHHCCCHHHHHHHEEECCCCEEEEEEEECCCHHHHHHHHHHHHHH QDFGIGADNSLSLISEGKLPEGYKAGWMWSTTFYNLADYYHPIFYEQYVKWLLERMTLDS HHHCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ETVEHLEKSASAWIEVGIEGNDLVVTLYLGQRQ HHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]