| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224064
Identifier: 212224064
GI number: 212224064
Start: 845483
End: 846370
Strand: Reverse
Name: 212224064
Synonym: TON_0915
Alternate gene names: NA
Gene position: 846370-845483 (Counterclockwise)
Preceding gene: 212224065
Following gene: 212224063
Centisome position: 45.81
GC content: 55.29
Gene sequence:
>888_bases ATGCAACTCGTCATAGCGAGCGGTAAGGGCGGCGTAGGAAAGAGCACCGTAACTGCTTCGCTCCTCTACCTTCTAAAGGA TGAGTACAACTTTGTGGCGGTGGATGCGGACGCAGATGCGCCGAACCTCGACCTCCTTCTTGGCGTCGAGCGCTGGGAAG AGGAGATGGAGCTGGTTGGCGCCAAGGTCGCTCACATAAACACGGAGAGCTGCATACGCTGTGGCATCTGTCAGGAGCGC TGCCCCTACGATTGTATCAAGGTCATCGACGGCGACTACGTTGTGAGTGAACTCACCTGTGAAGGCTGCAACGTCTGCAG TCTGGTCTGCCCGGTTCCAGGAACCATAACCCTCGAGGAAGTCCGCTCTGGGATAATAAGGAAGACCACCACGAAGTACG GCTTCCCGCTAATCTCAGCCCAGCTCGACGTCGGCAGGCCCAACAGCGGCAAGCTCGTAACTGAGGAGAAGGAGTGGGCG AAGAACCTGATGAAGGAGCTTGGCCTTAAGCACATGATAGTGGACAGCGCAGCTGGAATAGGCTGTCAGGTTATAGCGAG CATCGGCGGTGCAGATTTGACAATACTCATTGCCGAGCCGACGCCAGCCTCCCTCAGCGATGTTCAGAGGGCTTATAGGG TCATCCAGCACTTCAGGCAGCCGGCTTACCTTATAATCAACAAGGCCGACTTCAACCCTGGATTTAGAGCCCTCCACGAG TGGGCAGAGAGCGAGGGAATCCCGATACTTGGCGAGGTTCCCTACGACAAGGCGGTACCAAAGAGCATGGCGATGCTTAA GCCTGTTGTGGAGGCCTTTCCAGACTCAAAGGCATCCCAGGCGATAAAAGAGATTGCTGAGAGAATTAAGGCTGAGATAC TGAAATGA
Upstream 100 bases:
>100_bases ACGTGGAAGGAAGGCCGATAGTTCTGAGCGACTATCCTGAGGCCCGAATCTTCAGGAAGATTGCCGAGAGGGTTGTCGAA TTCATCGGGGGTGGTGAGTG
Downstream 100 bases:
>100_bases AGCCACAGTTCGTGGAATTTCCACTCTTCCCATCTTATCCTTAGTTAGAGCTCGTGCGTGGCTGGTTCTATAACCTTTCG TGGTTTGTGGCGAGGCAACC
Product: ATPase, N-terminus
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MQLVIASGKGGVGKSTVTASLLYLLKDEYNFVAVDADADAPNLDLLLGVERWEEEMELVGAKVAHINTESCIRCGICQER CPYDCIKVIDGDYVVSELTCEGCNVCSLVCPVPGTITLEEVRSGIIRKTTTKYGFPLISAQLDVGRPNSGKLVTEEKEWA KNLMKELGLKHMIVDSAAGIGCQVIASIGGADLTILIAEPTPASLSDVQRAYRVIQHFRQPAYLIINKADFNPGFRALHE WAESEGIPILGEVPYDKAVPKSMAMLKPVVEAFPDSKASQAIKEIAERIKAEILK
Sequences:
>Translated_295_residues MQLVIASGKGGVGKSTVTASLLYLLKDEYNFVAVDADADAPNLDLLLGVERWEEEMELVGAKVAHINTESCIRCGICQER CPYDCIKVIDGDYVVSELTCEGCNVCSLVCPVPGTITLEEVRSGIIRKTTTKYGFPLISAQLDVGRPNSGKLVTEEKEWA KNLMKELGLKHMIVDSAAGIGCQVIASIGGADLTILIAEPTPASLSDVQRAYRVIQHFRQPAYLIINKADFNPGFRALHE WAESEGIPILGEVPYDKAVPKSMAMLKPVVEAFPDSKASQAIKEIAERIKAEILK >Mature_295_residues MQLVIASGKGGVGKSTVTASLLYLLKDEYNFVAVDADADAPNLDLLLGVERWEEEMELVGAKVAHINTESCIRCGICQER CPYDCIKVIDGDYVVSELTCEGCNVCSLVCPVPGTITLEEVRSGIIRKTTTKYGFPLISAQLDVGRPNSGKLVTEEKEWA KNLMKELGLKHMIVDSAAGIGCQVIASIGGADLTILIAEPTPASLSDVQRAYRVIQHFRQPAYLIINKADFNPGFRALHE WAESEGIPILGEVPYDKAVPKSMAMLKPVVEAFPDSKASQAIKEIAERIKAEILK
Specific function: Unknown
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 32064; Mature: 32064
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLVIASGKGGVGKSTVTASLLYLLKDEYNFVAVDADADAPNLDLLLGVERWEEEMELVG CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECHHHHHHHHHHHH AKVAHINTESCIRCGICQERCPYDCIKVIDGDYVVSELTCEGCNVCSLVCPVPGTITLEE HHHEECCHHHHHHHCCCHHHCCHHHHHHHCCCEEEEHHCCCCCCEEEEECCCCCCEEHHH VRSGIIRKTTTKYGFPLISAQLDVGRPNSGKLVTEEKEWAKNLMKELGLKHMIVDSAAGI HHCCHHHHHHHHCCCEEEEEEEECCCCCCCCEEECHHHHHHHHHHHCCCHHEEHHCCCCC GCQVIASIGGADLTILIAEPTPASLSDVQRAYRVIQHFRQPAYLIINKADFNPGFRALHE CHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH WAESEGIPILGEVPYDKAVPKSMAMLKPVVEAFPDSKASQAIKEIAERIKAEILK HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLVIASGKGGVGKSTVTASLLYLLKDEYNFVAVDADADAPNLDLLLGVERWEEEMELVG CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECHHHHHHHHHHHH AKVAHINTESCIRCGICQERCPYDCIKVIDGDYVVSELTCEGCNVCSLVCPVPGTITLEE HHHEECCHHHHHHHCCCHHHCCHHHHHHHCCCEEEEHHCCCCCCEEEEECCCCCCEEHHH VRSGIIRKTTTKYGFPLISAQLDVGRPNSGKLVTEEKEWAKNLMKELGLKHMIVDSAAGI HHCCHHHHHHHHCCCEEEEEEEECCCCCCCCEEECHHHHHHHHHHHCCCHHEEHHCCCCC GCQVIASIGGADLTILIAEPTPASLSDVQRAYRVIQHFRQPAYLIINKADFNPGFRALHE CHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH WAESEGIPILGEVPYDKAVPKSMAMLKPVVEAFPDSKASQAIKEIAERIKAEILK HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]