| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224065
Identifier: 212224065
GI number: 212224065
Start: 846370
End: 847239
Strand: Reverse
Name: 212224065
Synonym: TON_0916
Alternate gene names: NA
Gene position: 847239-846370 (Counterclockwise)
Preceding gene: 212224074
Following gene: 212224064
Centisome position: 45.86
GC content: 54.14
Gene sequence:
>870_bases ATGCAGATCGCAGTGAGCGGAGGAAAAGGTGGAACCGGAAAATCCACCATTGCGATAAATCTCGCGATAGCCCTTAAAGA GCACTTTGATCTTGTTCTGGCCGATTTGGATGTTGAGGCACCAAACGACCATCTGCTTCTTGGAGTTGAGCTCCAGAACG AGGAGCCCGTTGAGCTCTTCATGCCGCGCTTTGACTACTCCAAGTGTACTCACTGCAGAAAGTGCGCAGAAGTTTGTGAG GAGCACGCGATAATAACCATGCGTGACGGAACTCCCTTCCTGATGCCCAACCTCTGTTCTGGTTGCGCAGCCTGTGAGAT AGTCTGCCCGGTTCCCGGAGCGATACTGCCCGGCAAGAAGCTTATGGGCCACACATATCTAACGGAGACGCCCTACGGCT TCCCGCTCGTTACGGGCAGGCTTTTGGAGGGCGAGGAGAGGGCCATGCCCATCGTTTCAAGAGCGAAGAAGAGGGCCCAG AGCTTAAATAAGGAGCTTCTGCTCGTTGACACTGCTGCCGGAACGAGCAATACCGTTTCGAAGGCACTTGAAGATTCTAA GCTCATCATAGCCGTCACCGAGCCGACACCGCTCGGGCTTCATGACAGCGAACTTATCCTCCGGTTGGCTCGGCTCATGG ACATTCCGGCTATGATAATCGTTAACCGCTCCGATCTGGGTGACGTTGGAAAGGTCAGGGAAATTGCCGAGCGCTATAGC GCCGAGATAATAGCCGAGATCCCCTACAGCGAGAACGTCATACGAAGCTACGTGGAAGGAAGGCCGATAGTTCTGAGCGA CTATCCTGAGGCCCGAATCTTCAGGAAGATTGCCGAGAGGGTTGTCGAATTCATCGGGGGTGGTGAGTGA
Upstream 100 bases:
>100_bases ATCCCAAAGGCAACTTTCAGGCACCTCATGACCATCACCGTGTGAGCATATGCACAAAGCTTAAAAACTTTTAGGTTAGC CTAATTCTGGGGGTGAGGTA
Downstream 100 bases:
>100_bases TGCAACTCGTCATAGCGAGCGGTAAGGGCGGCGTAGGAAAGAGCACCGTAACTGCTTCGCTCCTCTACCTTCTAAAGGAT GAGTACAACTTTGTGGCGGT
Product: ATPase C-terminus
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQIAVSGGKGGTGKSTIAINLAIALKEHFDLVLADLDVEAPNDHLLLGVELQNEEPVELFMPRFDYSKCTHCRKCAEVCE EHAIITMRDGTPFLMPNLCSGCAACEIVCPVPGAILPGKKLMGHTYLTETPYGFPLVTGRLLEGEERAMPIVSRAKKRAQ SLNKELLLVDTAAGTSNTVSKALEDSKLIIAVTEPTPLGLHDSELILRLARLMDIPAMIIVNRSDLGDVGKVREIAERYS AEIIAEIPYSENVIRSYVEGRPIVLSDYPEARIFRKIAERVVEFIGGGE
Sequences:
>Translated_289_residues MQIAVSGGKGGTGKSTIAINLAIALKEHFDLVLADLDVEAPNDHLLLGVELQNEEPVELFMPRFDYSKCTHCRKCAEVCE EHAIITMRDGTPFLMPNLCSGCAACEIVCPVPGAILPGKKLMGHTYLTETPYGFPLVTGRLLEGEERAMPIVSRAKKRAQ SLNKELLLVDTAAGTSNTVSKALEDSKLIIAVTEPTPLGLHDSELILRLARLMDIPAMIIVNRSDLGDVGKVREIAERYS AEIIAEIPYSENVIRSYVEGRPIVLSDYPEARIFRKIAERVVEFIGGGE >Mature_289_residues MQIAVSGGKGGTGKSTIAINLAIALKEHFDLVLADLDVEAPNDHLLLGVELQNEEPVELFMPRFDYSKCTHCRKCAEVCE EHAIITMRDGTPFLMPNLCSGCAACEIVCPVPGAILPGKKLMGHTYLTETPYGFPLVTGRLLEGEERAMPIVSRAKKRAQ SLNKELLLVDTAAGTSNTVSKALEDSKLIIAVTEPTPLGLHDSELILRLARLMDIPAMIIVNRSDLGDVGKVREIAERYS AEIIAEIPYSENVIRSYVEGRPIVLSDYPEARIFRKIAERVVEFIGGGE
Specific function: Unknown
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31570; Mature: 31570
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAVSGGKGGTGKSTIAINLAIALKEHFDLVLADLDVEAPNDHLLLGVELQNEEPVELF CEEEEECCCCCCCCEEEEEEEEEEEHHCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEE MPRFDYSKCTHCRKCAEVCEEHAIITMRDGTPFLMPNLCSGCAACEIVCPVPGAILPGKK ECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCEEEEECCCCCCCCCCHH LMGHTYLTETPYGFPLVTGRLLEGEERAMPIVSRAKKRAQSLNKELLLVDTAAGTSNTVS HHCCEEECCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH KALEDSKLIIAVTEPTPLGLHDSELILRLARLMDIPAMIIVNRSDLGDVGKVREIAERYS HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC AEIIAEIPYSENVIRSYVEGRPIVLSDYPEARIFRKIAERVVEFIGGGE CEEEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQIAVSGGKGGTGKSTIAINLAIALKEHFDLVLADLDVEAPNDHLLLGVELQNEEPVELF CEEEEECCCCCCCCEEEEEEEEEEEHHCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEE MPRFDYSKCTHCRKCAEVCEEHAIITMRDGTPFLMPNLCSGCAACEIVCPVPGAILPGKK ECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCEEEEECCCCCCCCCCHH LMGHTYLTETPYGFPLVTGRLLEGEERAMPIVSRAKKRAQSLNKELLLVDTAAGTSNTVS HHCCEEECCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH KALEDSKLIIAVTEPTPLGLHDSELILRLARLMDIPAMIIVNRSDLGDVGKVREIAERYS HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC AEIIAEIPYSENVIRSYVEGRPIVLSDYPEARIFRKIAERVVEFIGGGE CEEEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]