| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223957
Identifier: 212223957
GI number: 212223957
Start: 751740
End: 752207
Strand: Reverse
Name: 212223957
Synonym: TON_0808
Alternate gene names: NA
Gene position: 752207-751740 (Counterclockwise)
Preceding gene: 212223958
Following gene: 212223952
Centisome position: 40.71
GC content: 52.99
Gene sequence:
>468_bases TTGAATAACCTCCTTGAGGTTTTCATACTATCTCTGGTTCCCACATTCGAGGGAAGATATGCTATCGTTTACGGCATAGG TAAAGGCTATCCCCTGTGGAAGACCCTTCTGGCGGCTTCTCTTGGCGTTCTGCTTCTCTCGCTTGTCCTTCCGGCGATCC TGCCCTACATAGACAGACTTATGCTCTGGCTGGGGAAAACGCCGCTGGAGAATGTTGCGAGGCTCTATCTGTACTACATC GAGCGAGTGAGGAGAAAAGCCCACCCATACGTTGAGAAGTGGGGATTCCTCGGATTAACAATCTTTGTCGCCATACCCTT TCCCGGAACTGGCGTATGGACGGGGGCTCTGGCCGCTTACCTGCTTGGCATCGAGAAGAGAATGACCGTTCCCGCCTTGA TCCTCGGAGGACTCCTAAGTATGGCGATAACGCTTGTGCCCAGTCTCGGGATCTTCGGGGTTTCGTGA
Upstream 100 bases:
>100_bases CTTGGCCCTTGGGTGGGCATGGTTGTAGAGCTCGCCGAAAACTGGTGGCTTTCCCACTACAGGGCAATAGTCAAAAAGCT CAAACTGGAGGTGTTTGACG
Downstream 100 bases:
>100_bases TGGGAGCTGAAAAAATGAAACAGAGATTTAAGCCAGCTCCTTCCCCATAGTCTCCTCGCCAAGGATCAGAACGTCCAGAG CGCCTATTATTGAGACCACC
Product: membrane protein, conserved
Products: NA
Alternate protein names: Small Multidrug Export Protein; Small Multi-Drug Export Protein; Small Multidrug Export Related Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRLMLWLGKTPLENVARLYLYYI ERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAYLLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS
Sequences:
>Translated_155_residues MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRLMLWLGKTPLENVARLYLYYI ERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAYLLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS >Mature_155_residues MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRLMLWLGKTPLENVARLYLYYI ERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAYLLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS
Specific function: Unknown
COG id: COG2426
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17094; Mature: 17094
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRL CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLWLGKTPLENVARLYLYYIERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAY HHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHH LLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRL CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLWLGKTPLENVARLYLYYIERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAY HHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHH LLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA