Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212223957

Identifier: 212223957

GI number: 212223957

Start: 751740

End: 752207

Strand: Reverse

Name: 212223957

Synonym: TON_0808

Alternate gene names: NA

Gene position: 752207-751740 (Counterclockwise)

Preceding gene: 212223958

Following gene: 212223952

Centisome position: 40.71

GC content: 52.99

Gene sequence:

>468_bases
TTGAATAACCTCCTTGAGGTTTTCATACTATCTCTGGTTCCCACATTCGAGGGAAGATATGCTATCGTTTACGGCATAGG
TAAAGGCTATCCCCTGTGGAAGACCCTTCTGGCGGCTTCTCTTGGCGTTCTGCTTCTCTCGCTTGTCCTTCCGGCGATCC
TGCCCTACATAGACAGACTTATGCTCTGGCTGGGGAAAACGCCGCTGGAGAATGTTGCGAGGCTCTATCTGTACTACATC
GAGCGAGTGAGGAGAAAAGCCCACCCATACGTTGAGAAGTGGGGATTCCTCGGATTAACAATCTTTGTCGCCATACCCTT
TCCCGGAACTGGCGTATGGACGGGGGCTCTGGCCGCTTACCTGCTTGGCATCGAGAAGAGAATGACCGTTCCCGCCTTGA
TCCTCGGAGGACTCCTAAGTATGGCGATAACGCTTGTGCCCAGTCTCGGGATCTTCGGGGTTTCGTGA

Upstream 100 bases:

>100_bases
CTTGGCCCTTGGGTGGGCATGGTTGTAGAGCTCGCCGAAAACTGGTGGCTTTCCCACTACAGGGCAATAGTCAAAAAGCT
CAAACTGGAGGTGTTTGACG

Downstream 100 bases:

>100_bases
TGGGAGCTGAAAAAATGAAACAGAGATTTAAGCCAGCTCCTTCCCCATAGTCTCCTCGCCAAGGATCAGAACGTCCAGAG
CGCCTATTATTGAGACCACC

Product: membrane protein, conserved

Products: NA

Alternate protein names: Small Multidrug Export Protein; Small Multi-Drug Export Protein; Small Multidrug Export Related Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRLMLWLGKTPLENVARLYLYYI
ERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAYLLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS

Sequences:

>Translated_155_residues
MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRLMLWLGKTPLENVARLYLYYI
ERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAYLLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS
>Mature_155_residues
MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRLMLWLGKTPLENVARLYLYYI
ERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAYLLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS

Specific function: Unknown

COG id: COG2426

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17094; Mature: 17094

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRL
CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLWLGKTPLENVARLYLYYIERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAY
HHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHH
LLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNNLLEVFILSLVPTFEGRYAIVYGIGKGYPLWKTLLAASLGVLLLSLVLPAILPYIDRL
CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLWLGKTPLENVARLYLYYIERVRRKAHPYVEKWGFLGLTIFVAIPFPGTGVWTGALAAY
HHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHH
LLGIEKRMTVPALILGGLLSMAITLVPSLGIFGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA