| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223952
Identifier: 212223952
GI number: 212223952
Start: 745342
End: 746478
Strand: Reverse
Name: 212223952
Synonym: TON_0803
Alternate gene names: NA
Gene position: 746478-745342 (Counterclockwise)
Preceding gene: 212223957
Following gene: 212223939
Centisome position: 40.4
GC content: 50.4
Gene sequence:
>1137_bases ATGGACTGCATTAAACGCTTCTACCTCGCGGGATTCCTCTACATTGCCCTTTATGCAGGCTTCTATCAGGTCTACCTCCA GAGCTTAGGCCTATCTAAGGGGCAGATTGGCCTGCTGGCGGCGGTTTCTCTACTCCTTGTGGCCTTCCTTGAAGTTCCAA CTGGAGTGGTGGCGGACAAGATTTCAAAGAAGACAAGTGTTCTGGTGGCGAGGGCTCTTTTTCTTGCCTCTCTTCCCCTG CTCTATTTTGCTAATTCTTTTGCTGACGTATTCCTTGCTACTATCATAGGTGCCCTCTCAACGGCTTTTACCACTGGTGC AGAAACAGGCTGGCTCTATGAGCTTTTAAAGAGAGACGGACGAGCAGATGAATATCCGAGAGTTTACGGAAGACTAAGAT CCTTTGAAATGGCCGGCGGTTTCGTTGGAACTCTTACAGGGGGCATCCTTGCGGACTTTGCTGGCAGTATGAGGCTTCCA ATAATCCTGAGCCTTCCCTTCGTTCTGACTTCGCTCTTAATACTCGTCACGATTCCAAAGGACACCGTGAGAAGCGGGCT TCCATACGGTCACCACCTTCTTGAGAGCATCAGGTTCGTCTGGAACTCCCGCGAAGTTCTCTGGCTTTTCATCTATGCAA ACATCATTGGCCTTCCCGTGACCCTCTTCACGGCTTTCATGCAGCTCTACTTCTATGGATTCCTCGCGTCCGTTCTCGCT GTTTCGGGTGTTGTGGCACTTCACATGACCATCAACAGCATTTCATGGTACATTGACGTAGGGGATAAAGTGAGGGAGAG GCTTTACCTCTATGCGGGGATTCTTCTTCCGTTCCTCTCACTTCTCGCGGGACTGAGCGGCTGGTTCGGGCTCATCACGC TGGTTCTTGAAACGTTTATATTCGCCCAGGCTTTCAAGGAGTGGCAGGGAAGGTTTCAGAAGGCGATCCCCGATGAGAAA AGGGCCACTGTTGGTTCCCTTTACTCCCTCATAGCGGCTACCACTAATGGGGCCCTCAACGCTGTCCTTGGGTGGCTCTT TGATTATGTGGGCATAATGCGTGGGATAGTCCTCGCATCGGTGTTCTTTTTGGGGTTGAGTTCTCTGGCATTCACTAAAA AGATGAGAAATCTCTAA
Upstream 100 bases:
>100_bases AGGTATAAAAGTCTTTCCGCTTCGATGACGGTCGAAAAAAGGCTTTAATCTTCGGTCTGTTATGCGTACTTTTAGGAGTA TGAAATCACGGAGGGTGGCG
Downstream 100 bases:
>100_bases AACTTCTCTTCGCATTCACACGGGTTCTTTCCGCAGTAGGGGCAGACGCCCGGGTATTTCTTCTTTGCCGCTTCCTCCAA ATCAACGCCAACGAGGTTTG
Product: permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADKISKKTSVLVARALFLASLPL LYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDGRADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLP IILSLPFVLTSLLILVTIPKDTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFIFAQAFKEWQGRFQKAIPDEK RATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLASVFFLGLSSLAFTKKMRNL
Sequences:
>Translated_378_residues MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADKISKKTSVLVARALFLASLPL LYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDGRADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLP IILSLPFVLTSLLILVTIPKDTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFIFAQAFKEWQGRFQKAIPDEK RATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLASVFFLGLSSLAFTKKMRNL >Mature_378_residues MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADKISKKTSVLVARALFLASLPL LYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDGRADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLP IILSLPFVLTSLLILVTIPKDTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFIFAQAFKEWQGRFQKAIPDEK RATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLASVFFLGLSSLAFTKKMRNL
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41651; Mature: 41651
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH ISKKTSVLVARALFLASLPLLYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC RADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLPIILSLPFVLTSLLILVTIPK CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH DTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFI HHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAQAFKEWQGRFQKAIPDEKRATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VFFLGLSSLAFTKKMRNL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH ISKKTSVLVARALFLASLPLLYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC RADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLPIILSLPFVLTSLLILVTIPK CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH DTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFI HHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAQAFKEWQGRFQKAIPDEKRATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VFFLGLSSLAFTKKMRNL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA