Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223952

Identifier: 212223952

GI number: 212223952

Start: 745342

End: 746478

Strand: Reverse

Name: 212223952

Synonym: TON_0803

Alternate gene names: NA

Gene position: 746478-745342 (Counterclockwise)

Preceding gene: 212223957

Following gene: 212223939

Centisome position: 40.4

GC content: 50.4

Gene sequence:

>1137_bases
ATGGACTGCATTAAACGCTTCTACCTCGCGGGATTCCTCTACATTGCCCTTTATGCAGGCTTCTATCAGGTCTACCTCCA
GAGCTTAGGCCTATCTAAGGGGCAGATTGGCCTGCTGGCGGCGGTTTCTCTACTCCTTGTGGCCTTCCTTGAAGTTCCAA
CTGGAGTGGTGGCGGACAAGATTTCAAAGAAGACAAGTGTTCTGGTGGCGAGGGCTCTTTTTCTTGCCTCTCTTCCCCTG
CTCTATTTTGCTAATTCTTTTGCTGACGTATTCCTTGCTACTATCATAGGTGCCCTCTCAACGGCTTTTACCACTGGTGC
AGAAACAGGCTGGCTCTATGAGCTTTTAAAGAGAGACGGACGAGCAGATGAATATCCGAGAGTTTACGGAAGACTAAGAT
CCTTTGAAATGGCCGGCGGTTTCGTTGGAACTCTTACAGGGGGCATCCTTGCGGACTTTGCTGGCAGTATGAGGCTTCCA
ATAATCCTGAGCCTTCCCTTCGTTCTGACTTCGCTCTTAATACTCGTCACGATTCCAAAGGACACCGTGAGAAGCGGGCT
TCCATACGGTCACCACCTTCTTGAGAGCATCAGGTTCGTCTGGAACTCCCGCGAAGTTCTCTGGCTTTTCATCTATGCAA
ACATCATTGGCCTTCCCGTGACCCTCTTCACGGCTTTCATGCAGCTCTACTTCTATGGATTCCTCGCGTCCGTTCTCGCT
GTTTCGGGTGTTGTGGCACTTCACATGACCATCAACAGCATTTCATGGTACATTGACGTAGGGGATAAAGTGAGGGAGAG
GCTTTACCTCTATGCGGGGATTCTTCTTCCGTTCCTCTCACTTCTCGCGGGACTGAGCGGCTGGTTCGGGCTCATCACGC
TGGTTCTTGAAACGTTTATATTCGCCCAGGCTTTCAAGGAGTGGCAGGGAAGGTTTCAGAAGGCGATCCCCGATGAGAAA
AGGGCCACTGTTGGTTCCCTTTACTCCCTCATAGCGGCTACCACTAATGGGGCCCTCAACGCTGTCCTTGGGTGGCTCTT
TGATTATGTGGGCATAATGCGTGGGATAGTCCTCGCATCGGTGTTCTTTTTGGGGTTGAGTTCTCTGGCATTCACTAAAA
AGATGAGAAATCTCTAA

Upstream 100 bases:

>100_bases
AGGTATAAAAGTCTTTCCGCTTCGATGACGGTCGAAAAAAGGCTTTAATCTTCGGTCTGTTATGCGTACTTTTAGGAGTA
TGAAATCACGGAGGGTGGCG

Downstream 100 bases:

>100_bases
AACTTCTCTTCGCATTCACACGGGTTCTTTCCGCAGTAGGGGCAGACGCCCGGGTATTTCTTCTTTGCCGCTTCCTCCAA
ATCAACGCCAACGAGGTTTG

Product: permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADKISKKTSVLVARALFLASLPL
LYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDGRADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLP
IILSLPFVLTSLLILVTIPKDTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA
VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFIFAQAFKEWQGRFQKAIPDEK
RATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLASVFFLGLSSLAFTKKMRNL

Sequences:

>Translated_378_residues
MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADKISKKTSVLVARALFLASLPL
LYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDGRADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLP
IILSLPFVLTSLLILVTIPKDTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA
VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFIFAQAFKEWQGRFQKAIPDEK
RATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLASVFFLGLSSLAFTKKMRNL
>Mature_378_residues
MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADKISKKTSVLVARALFLASLPL
LYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDGRADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLP
IILSLPFVLTSLLILVTIPKDTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA
VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFIFAQAFKEWQGRFQKAIPDEK
RATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLASVFFLGLSSLAFTKKMRNL

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41651; Mature: 41651

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
ISKKTSVLVARALFLASLPLLYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
RADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLPIILSLPFVLTSLLILVTIPK
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH
DTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA
HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFI
HHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQAFKEWQGRFQKAIPDEKRATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLAS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VFFLGLSSLAFTKKMRNL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDCIKRFYLAGFLYIALYAGFYQVYLQSLGLSKGQIGLLAAVSLLLVAFLEVPTGVVADK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
ISKKTSVLVARALFLASLPLLYFANSFADVFLATIIGALSTAFTTGAETGWLYELLKRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
RADEYPRVYGRLRSFEMAGGFVGTLTGGILADFAGSMRLPIILSLPFVLTSLLILVTIPK
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH
DTVRSGLPYGHHLLESIRFVWNSREVLWLFIYANIIGLPVTLFTAFMQLYFYGFLASVLA
HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGVVALHMTINSISWYIDVGDKVRERLYLYAGILLPFLSLLAGLSGWFGLITLVLETFI
HHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQAFKEWQGRFQKAIPDEKRATVGSLYSLIAATTNGALNAVLGWLFDYVGIMRGIVLAS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VFFLGLSSLAFTKKMRNL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA